Basic Information

Insect: Xestia sexstrigata
Gene Symbol: clz9
Assembly: GCA_941918865.2
Location: CALNXB020000304.1:964671-966026[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.3e-08 1.5e-05 25.1 0.0 2 37 8 43 7 47 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.3e-08	1.5e-05	25.1	0.0	2	37	8	43	7	47	0.89

Sequence Information

Coding Sequence: atgactgaaagaaactacaagcaagaggaccttttaaaagccatagaagctgtAAATCAAGGGGCCACAACATCAGATGCAGCAAGAAAATTTAAAGTGCCAAGGACCACATTAAATGACAAGATTAAAGGGCGTAGTTTAGTCGGCTGCTCTAAAGGACCAACGACTGTTTTAACTCCAGAAGAAGAAGAACATTTAAAGAACTGGTTAATTTTCATGGCAGAAAGTGGTTTTCCTGTAACATCAGATCAGTTATTAGATAGCGTCAAATTATTAGTTACCAAATTCAAACGTAGTAACCCATTTACTAACAATAGACCAGGTCGACATTGGTTCGAGTCATTCATAAAGCGTCACCCTGAAGTGGGTCGGAGGGTGTCCCAAAATTTGACACAATCTCGAGCATTAGTCACGGAAGATGATGTTCGTACGTGGTTCAAAGAAGTTCAGGATTATTTTTGTACTGCTCAGCTACAGGCAACTTCTGAAGACCCGCGGAGAATTTTTAACTGCGATGAGAGCGCCTTTTTCTTGTCCCCCGCTGACAACCGAGTCTTAGCGAAACGTGGGTCTAAAAATGTTTACAATATAATACCAAGTGGAGAAAAAGAGTGCGTAACAGTTCTCCTAACAGCTAATGCATCAGGTGAATTGGCACCGCCGATGGTTCTTTTTAAGCTTAAGTCAATCCCTTACAAAATTTCGACTTCAGCACCCAATGATTGGGGATTAGGGCACACAAAAAGAGGCTGGATGACTGGCGAAGCTTTCTATAATGAATATATAGCAAATGCGTTCTACCCTTGGGTTATAAGAAGTGGCATTCAGCTGCCGATAATATTTTATTTGGATGGCCACTGCTCTCATACGACGCTACCATTGAGCAATTTCTGTAGAGAAAATCAAATTATACTCATCGCGCTCTATCCAAATGCTACACATATTCTTCAACCCATGGATGTAGCAGTATTTAGGCCTCTCAAAAGAATATGGAAACAATCTGTATATGATTGGCGCAATGAGAATCACTTTGTAAAACTAAAAAAGGAAAATTTCTGTCCCTTGTTAGACAAGACTCTCAAACAATTAAACAGAAATTCTATTGTATATGGATTTCGTAAATGTGGGCTGTCACCATTTGACGCTAATAACGTTGATTATACTAAATGTGTCACCAAAAAGTTAAGCCAGTCCACCCAGAAAACCAAAACAGCTGATAAAGTTTCCTTGTCCGACAAACATAATCACATAAAATTTTTTGAATCTCAGATGAGCCCCAGGACACTTAAAACTTTCCATGATAATAGAATGTCAACATGGAATGGTGAAAAATCGTTGGAGGgactgattttgtga
Protein Sequence: MTERNYKQEDLLKAIEAVNQGATTSDAARKFKVPRTTLNDKIKGRSLVGCSKGPTTVLTPEEEEHLKNWLIFMAESGFPVTSDQLLDSVKLLVTKFKRSNPFTNNRPGRHWFESFIKRHPEVGRRVSQNLTQSRALVTEDDVRTWFKEVQDYFCTAQLQATSEDPRRIFNCDESAFFLSPADNRVLAKRGSKNVYNIIPSGEKECVTVLLTANASGELAPPMVLFKLKSIPYKISTSAPNDWGLGHTKRGWMTGEAFYNEYIANAFYPWVIRSGIQLPIIFYLDGHCSHTTLPLSNFCRENQIILIALYPNATHILQPMDVAVFRPLKRIWKQSVYDWRNENHFVKLKKENFCPLLDKTLKQLNRNSIVYGFRKCGLSPFDANNVDYTKCVTKKLSQSTQKTKTADKVSLSDKHNHIKFFESQMSPRTLKTFHDNRMSTWNGEKSLEGLIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00043429; iTF_00300135; iTF_00928621; iTF_00928622; iTF_00928623; iTF_00040752; iTF_00928624; iTF_00928625; iTF_00040754; iTF_01064598; iTF_00041720; iTF_00041721; iTF_00041722; iTF_00041723; iTF_00041724; iTF_00040753; iTF_00043427; iTF_00040750; iTF_00726286; iTF_01028222; iTF_01527082;
90% Identity: iTF_00040750; iTF_00726286; iTF_01028222; iTF_00040754; iTF_00300135; iTF_00928621; iTF_00928622; iTF_00928623; iTF_00928624; iTF_01064598; iTF_00041720; iTF_00041721; iTF_00041722; iTF_00041723; iTF_00041724; iTF_00043427; iTF_00043429; iTF_01527082; iTF_00040752; iTF_00040753; iTF_00928625;
80% Identity: -