Xrho025061.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xestia rhomboidea
Gene Symbol
ct
Assembly
GCA_963853795.1
Location
OY970776.1:1421308-1457935[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.7e-27 5.9e-23 81.7 0.0 3 70 215 283 213 289 0.94
2 3 5.4e-32 6.9e-28 97.5 0.0 4 77 615 689 613 691 0.96
3 3 7.8e-31 9.9e-27 93.8 0.0 3 75 818 891 816 895 0.95

Sequence Information

Coding Sequence
ATGTGTGGTGAGAAGGTGTCTGACAAAATTATTACACCTTTTTTACAGATCGCCCAACTAGTGGAAGACGTACGCCGTCTCCAAGCATCGCTTACAGCGCTTCAGGaagcgcacgctcagcagttgcAGCGGCTAGAAGAACGGCTGGACGAGAAGAAACAGCATATCGCCAGGCTTGAAGCGAGGCTCGACACCCAGAGGGACTATGATGATATCAAAAGAGAAATCAGCATGCTTCGAGCCCTCGACCTTGGCGGTGGGGAACGATCTTTAGAGCGCAAGCCTGAAATTCGTTCGCCAAGCACCGCTCCTTCGCTCCGAGACCATTCGGCCGAGCGAGAGCGAAGCGCCGAGCGCAGGGAACGGGATACAGGTGTGGAGGAGTGGCCCAGCACGCCGCCGCCACTCAACAACAACACGACGCACCACAACAACAACGGGCCCACGTTGCCGCTGCCGCTGCCGCCACCGAGCCCCTTCCGCTTCGAGGAGCACCGCACCTACAGGTTCGCCGAAGACATGGGACCCCTGCCGCCCGGCGCTCTAGTCGGACGCCTCGGCGACTCCCTCATCCCCAAAGGCGACCCCATGGAGGCACGACTACAAGAGATGCTAAGATATAACATTGACAAATATGCGAATACGAACTTGGATACGTTGCATATAAGCCGGAGAGTGCGAGAGCTGCTGTCGGTCCACAACATTGGACAGAGGCTGTTCGCTAAGTACGTGCTGGGCCTGTCCCAAGGGACAGTGTCGGAACTGCTGTCGAAGCCGAAGCCCTGGGACAAGCTGACGGAGAAGGGGCGCGACTCGTACCGCAAAATGCACGCGTGGGCCTGCGACGAGGCTGCCATCATGCTGCTCAAGTCACTGATCCCTAAAAAAGttgGGACGAAGGATGGCACCGGCGCAGTTTTTGGTCGGCCGGAGGGTGAGGGTGACGACAGGCTCACGCACGCAATCCTGAGTGAAGCGCATCTGATGAAGACGCCCGGTGGACCTCCCCACAACGATGACTCCAGAAGCAACGAGGACTCTAGCTCGCCAAGGACTCAGTGCCCCTCTCCTTTCTCCAATAAGGATGGGAGTCAAAACAGAAGACTCAAGAAATACGAGAACGATGACATTCCTCAAGAGAAGGTGGCGCGCATATACCAGGAGGAGCTTGCCAAAATCATGACCAGGAGAGTAGAGGACATCCGCCGTGAAGGTTTTCCTGGCATGTTTCCTCCTTTTTTCAGCGGCGGCATGCCCCCACACATGGAGAGGCCACCGGAAGACATCCGCATGGCCCTGGAAGCGTACCACAGAGAACTTGCCAAGATCCAGCCGGGTGGCAACATTCCCAACCTCCACAACTTGCCAGCCATGCCGCCCTTTCCGAACCTCCTCGCCTTGCAGCAGCAGGCGATGCAACAAGCACAGAACCAACAGATGAACGGCTCAGGAGCGGTCCAAGATCTCTCTTTGCCGAAAGATAAACACGCCAAAATAAATGGAATGACTGATAGTGATAAGGATAGATCAATGGATGCCGAAGAGGCTATAAGGCACGCGGGGAGCGCATTCTCATTAGTAAGGCCTAAACTAGAGCCGGGACAGCAATCACAAACTGGATCGTCCGCGTCCAGCCCACTGGGGAACGCGATACTACCGCCTGCAATCACTCCAAATGAGGATTTCAGTAATTCAGCGGCAGCAAGCCCACTGCAGAGGATGGCTTCGATCACGAACAGTCTGATCTCCCAGCCGTCAAACCCTCCTCATCATCCACCCGTACAGAGGTCGATGAAAGCAGTTCTTCCACCAATCACACAGCAACAATTTGATCTCTTTAACAATTTGAACACTGAAGATATAGTAAGGAGAGTAAAAGAGGCTCTGAGCCAGTACTCCATTAGCCAAAGACTGTTCGGAGAATCCGTCCTTGGTCTATCACAAGGATCCGTGAGTGACTTGCTAGCGAGACCGAAGCCCTGGCACATGCTGACGCAGAAGGGACGAGAGCCTTTTATTCGCATGAAAATGTTCTTGGAGGATGACAATGCAGTCCACAAGCTGGTTGCATCACAGTACAAAATCGCGCCGGAAAAACTAATGAGGACTGGAAACTACAGCGGAGCACCTCCATGTCCGCCAAATATGAACAAACCCATGCCGCCAACACAGAAGATGATTTCCGACGCGACCTCCTTGCTGAGCAAGATGCAGCAGGAGCAGCTCCTGGGCGCGGGTCACCTGGGCCACCTGGGGCAGCCCACGCCGCTGCTCCTCACGCCGCCCGGCTTCCCGCCGCACCACGCCGTGACGCTGCCGCCGCAGCACcacgacaacaacaacaaggAGCGCAagcccccgccgccgccgcagccCCACCACCAGCCCCCCGTCATGCGCAGCCTGCACCAGCACATCTCGCCGAGCGTCTACGAGATGGCTGCGCTCACGCAAGACCTAGACACTCAAACGATTACGACCAAAATTAAGGAAGCGCTACTGGCAAACAACATTGGCCAGAAAATCTTTGGCGAAGCTGTTCTAGGTCTATCACAGGGTTCCGTCAGTGAATTGCTGTCAAAACCAAAACCCTGGCATATGCTCAGCATCAAAGGTAGGGAACCTTTCATTCGCATGCAGTTGTGGTTAAGCGATGCTCACAATATCGACCGCCTACAGGCTTTGAAGAATGAAAGACGGGAAGCGAGTAAACGACGACGGTCAAGCGGCCCCGGGCAAGACAACTCATCCGACACATCGTCGAATGATACGTCAGAGTTCTACCACTCGAGCTCGCCGGGCCCCACAGCTGGAGCGCCGTGTGCCAAGAAACAACGAGTACTGTTCTCCGAAGAGCAGAAGGAGGCACTCAGATTAGCATTCGCACTCGACCCCTACCCAAACATGCCAACGATCGAATTCCTCGCCGCAGAATTGGGTCTGTCCTCGAGAACCATCACCAACTGGTTCCACAACCACCGCATGCGGCTAAAACAACAAGCGCCTCATGGCTTGCCCGCCGAACCTCCTGCGCGGGATCAGTCCTCGGCGCCTTTCGACCCAGTCCAGTTCCGTCTTCTCCTCAATCAGAGACTACTGGAACTACAGAAGGAGAGGATGGGTCTCGCTGGCGTACCCCTTCCCTACCCGCCTTACTTCGCGGCCAACTCCAACCTAGCAGCGCTGATTGGTCGCGGGTTAATACCCCCCGAAGACCAGGTGAAGGATCAGTCCGGCGGCCTCGACCTTTCGATGCCGCTGAAACGAGAACCCGATGGTGATGACTTCGAGGACGACGACGTCGAGAGCAACCTCGGCTCCGAGGACTCGTTGGACGAGGAATCTAAGACTGAGCCGAAGGCGGCGTCGACGCCGCACGCTACAGGTCGATCCAGCAGACGAAAGCCTGCAGCGCCGCAGTGGGTTAACCCTGACTGGCAGGAAGACAAGCCACGTAACCCTGACGAAGTGATAATTAATGGAGTATGTGTGATGAGAAGCGATGACTTCCGGAGAGAGGCGGAGGAGACGGTGCGCGTGGAGCCGTCGCCGGTAGCGCGCGAGGGCTCGCCGGCCGCGTCGCCCGCGCCGCGCACCCCGCACACCCCGCACACCCCGCACACGCCGCACACCCCGCACACGCCGCGCCCGCCACACACACCTGAACACGTGATTCCTGAAGACAAAATTAAATCCGAGACCGACGACGGCTGGGAGTATTAA
Protein Sequence
MCGEKVSDKIITPFLQIAQLVEDVRRLQASLTALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRALDLGGGERSLERKPEIRSPSTAPSLRDHSAERERSAERRERDTGVEEWPSTPPPLNNNTTHHNNNGPTLPLPLPPPSPFRFEEHRTYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNIDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTGAVFGRPEGEGDDRLTHAILSEAHLMKTPGGPPHNDDSRSNEDSSSPRTQCPSPFSNKDGSQNRRLKKYENDDIPQEKVARIYQEELAKIMTRRVEDIRREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPAMPPFPNLLALQQQAMQQAQNQQMNGSGAVQDLSLPKDKHAKINGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSQTGSSASSPLGNAILPPAITPNEDFSNSAAASPLQRMASITNSLISQPSNPPHHPPVQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGAGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHQPPVMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEDQVKDQSGGLDLSMPLKREPDGDDFEDDDVESNLGSEDSLDEESKTEPKAASTPHATGRSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVAREGSPAASPAPRTPHTPHTPHTPHTPHTPRPPHTPEHVIPEDKIKSETDDGWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_01443621;
80% Identity
iTF_01532917;