Xrho002033.1
Basic Information
- Insect
- Xestia rhomboidea
- Gene Symbol
- jarid2b
- Assembly
- GCA_963853795.1
- Location
- OY970756.1:32804160-32828593[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-18 4.6e-15 56.8 0.0 15 89 964 1035 938 1035 0.87
Sequence Information
- Coding Sequence
- ATGCAACTGCGGCGCGGTTCGCTGCCCCAGCCCACCCAGTTCCGAGCTAGACTCCGTGCAACCGACATGTACCGCTATATAGTCGTCGGTTATCGCGACAGGGCACGCTCTCGGCGCGTGCAAGCGCAGCGCAAGTTCGCGCAGGGCGCCTACGTGCCGCAGAATGCGGCCGCCGCCGCCCCTGCCGACAACCGGCGCGATGCCATCCAAGACCCATCCAATGTTACACGAAATCACATGTCAGCGCCTAATTTATTAGACGTCGTGTCTCTCCACGGTTTGCACAACCCTTTGACTTCACAACCTGTAGTGCTCCTCGAGAGGCTGCGCGGCCGCCAGCATGCGCGTGTCTCGTCGCCCCAGCCATCCACATCGCAGAGGGACCCTTCTCAACCACGCTCTATTGAATGTCAAGATGCGAGGGTGTCGGCTACCTCTGTTGAGGGACCCAAACTACGAACAGCTAAAAAAGTGAAAGAGTATAAACGAGTACATGCCATGTCGTTGCGTTCACGGCGCCTTAGCAAGCTTAAACTAAACTTTATCGCCGAAAGTGGTGCATCACTGAGAAAGGTTACTTTTAAAAGGAAAAGGAACTCTTCTGACGAAGATGAACCTCTCatataccaaaaaaataaaaacaagaaagcTTTGCAAACGAAAAATTCGCTAAAACGGACTGCTGAGAGTGCTCCCTTAGTAGGCATTCTTAAGCATAACCCTCCCGTGGTGACGATTCCTGAGCAGGACGTACTTAAAGTACCATCCAACACTACTAAGCAGAGCGTTCCCAAGAAGCAAAGCGCTCACATTGTGCCCACTCCTAAACAAATCGCTCCTAAGGTGAACACTCCTGAAAAAAGCTCGAGCAGCAAGAAAAAGCAACGGAGAACAAGCCCGCCCATTAAATCTCTAAAGGTAAAATGTACGCGCTATAGAACACCCATACAGGTCACTCCCCAGAATAAGGATTCCGAGCCAACACCTATACCAGAGCTGGTCGTCTCTGTCACCGTCAAATCAGAGGAAAACGCAAATGATTGCGTAGACTTCGATGATAATTCTGCCGTGAACGGGGACACCTCAGATGACTGGTGTATTCCGGACGTCCCGGATGACCCACTCGACACAGATGCCACCCTCCCTCATAATGAACTGCTCCTCGTAGGTCTCCCCACTGAGAGCGCGCTCGACGTAGAAGACGCACGCGCACTCTGTGGCATTCCTGCCACAGAGGACGCGCGTGCCTCAGATGTTATGCACGCCACAGCGGGCGAGCACGCACTAGATGAAACGGTTGCCAAACAGGGAATGCTCGCCAAAGAGGGCGCACTCGCCATTGATGGCATGATGGCCACTGAGGGCACGCTCGACATCGAAGACATGATAACCACAGAGGATGCGCGCGCCTTCATTCTCGCCACAGAGGACGAGATCGCACGAGAAGACACGTTTGTCAAAGAGGACGACCTTGCCATTGTTCCGCTCGCCACAGAGGGCGAGCTCGCACCAGATGAAACGGTTGCCAAAGGAGGCATTCTCGCCAATGAGAACGAGGTCGCCTTTGATGGCTTTCTCGCCACTGAGAGCAAGCTCAACACAGATGGCAGCGCCGCGGATGAGGCGGTTATCTCATCCGACACGATTATTCCATCTTTGGAACAAGATAATGAACCAATAGAAGATGACTTCTTGTTACATTTTGACGACAACTCCGAAGATGAACGGGCAGTGATAGACAAGGTTGATAATATGGCGGAGCACCTGGATGATACGGTACTTTTGGAGGAATCTGTGCCTTGTGACCCGGTCGTCACTAGTGACGTGACTCTCGAGAATGCCATGAAGGACCCCCCCAGGATACGTGTGGTTTCTCCAGAACCTGGACCAAGTGGCATGCAGTTCCAATTCAGCGTATACGAGAAATCTCCTGAAGCACAAGATGATTACCACAGTGATACGAAAATTTACTTAAGTAATAACATACCTGAACAATATTTTAGAGAAGTTTTCCATAGAACAGCTCAGAACTTAGAGTTTGAGCGCAACCGAAAGCTTCAGAAGAAGACTTGTGTTGGGGCATCGTTGCGATCAGACCGGGACGTTATAAATGCATCTAATAATGAACAGGTTCGATTCGAACTTCGAAACGACATCATGTCATCCGACAGCGAAAGCAGTGATAGTAGCATTCAACAAGAGACAACAAAGAGAATAAAACAGCATAAATGTAAAGTTGCTCAAAAAAAACGCTTAGCTAAAGCGAAAATTATGTACCAACAAGTCAAAGCAGAAAAAGAAAAGGAGATAGCGGCGCTCGAAGCGCTAAAACAAGTTGAAATAAATCGAATTATGGCAGAGAAAAACAGTTGCGAGGCAGAGAAAACCCGCTACCAGGCGAGGTTTCATTTAAtgcagaaagagaaagaaaccGAGTTAGCTCGTCTCAAAAACGAGATGAGGCTAAAATTGCTCGCAGAGATGGAGGCTGATCGGAGCATGATCGCCGAAGTCGACGGTATGGCAAGGGCGCTTGAGAATGAACGGGACGCAAAAAACATGAACTCAGACAAAGACTACATTGAAAATCTAGATCAGCCTAGCACCAGCGGCCAAGGGTCCGCGGAAGCCGGGGTGCTTGTGGATGCGCCCGTTTACCACCCTACACTGGAGGAATTTGCTgatcccattaaattttatgaaaagaTATGGCCAGAAGCAGTGAGATTTGGCATTTGTAAAATAGTGCCACCTCCTGGTTGGGAGCCGCCAGAACACAAACTGGATGACGACATGAATTTTGATGTTACGCACCAGTTTATTTCGCGATTGCTCAGCCGTTGGGGACCGGCCGCACGAGAACTTTGTGCTATCAAGTTATGCCTCCTACGACAGAAAATTTCAATACATCGACTACCACTAGTGGATGGTGTTGAAATTAATTTACCAAAATTATACCACATGGTGCAACGGCACGGTGGTCTTCAACAAGTTATCGACAAAAAAAGATGGAGCAAAGTTGTAGAAGATTTAAATTTTACGAGGGGAATCggtacagaaaaaaaattaGACCAAATTTATGTTAAATATCTCCTCACATATGACATGCTTTCTCACGAGGAGCGCCACGAAATGATGGCAGAAGTGGAAGCGGCTTGGCGAAAGAAGCATCAAAAGCTTTTTGACCGAGCATTGAACCCGTTGTATCACCAGAAGCTATTGCTTGGCGTTCAGGATGAACCTGAGGAGGAGACTGAAGATCCAGACATACTGGAAGCTCTCAACGAGTCCGAGGACTGTATTATCAGGGGTTTAAGGACGACCCATACTCAATTTAAAAAAATTGCCACCTGGATGTACGAGAGCGTTTTCGGCCAGGGCTCTGAGAGCGCCCCGCCTCCTGACGTCAAAGATATCGAGGAGGCATACTGGCGCCTCGTGACGTTTGGCGCCGAGAATACATGTGTGATGAGCGCGACTATTGACACCGGCGAGGAAGGCTACGGCTGTGTCAAGAATACTTCAAACTCCCACCCCTGGCATCCCAAGATGGTTAGCCAGAATCGTCGCAACGTCCTTTCTTACTTAGATTCGATAATTGGCTTAACAGTTCCCACCCTACTGTTGGGAATGCTCTATTCCACATCCTGCTGGCACAAGGATCCACATCAAATAGCCTGGAAAGAATACCAACTCGTAGGAGCACCCAGAATATGGTATGCGATAGGGGAAGATCAGGCAGGGGACTTCAGGAAGGGCGTAGAAATTCTTTGCCCAACCTCCGCTCAAAACAAAAGACTGTGGCTGCCGTCGGACATCACGATGATCCCGCCGGACATGCTGCGCCAGCAAAACGTGACGCTGTCGCGCTTGGAGCAGCACCCGGGCGAATTCGTGATGGTGTTCCCCAACGCCTACACGTCCTGCATCAGCACGGGCTACTCGGTCACCGAGAGCGTTTACTTCGCGCCGCCGTCCTGGCTCAAGCGGCTATCGGCCGTCTTCAAGGAGACCCGTGAAAGTTGCGAGCCGACAATGTTCGCCATGGAACATCTTCTTTACAACATCGCAAGAGACCCAACAGCTGACGCAGAGATAGCGACCACCGCGCAGCCACTTTTCGAAAGGATGTTGCATGAAGAAGTGACGAACAGGCAGATGCTACAAGAGAGGGGTGTCACTTTTATTCATCAaTTGCAGAGCGACGACGCTATACCATCTACTTCAAGCGGGATTAGGAGAGAGTACAGCCCACGCGAGCAAGAGGAATGCGAGTACTGCCGGGCCACCTTGTTCCTCTCCAAGgtaAGGGGGATAACTGAACACAATACTCTATTGTGCCTGGAACATGCTCTGATGTTTTTGGACTCGGTGAAGTATAAAGATACGGACGTTCGTCACGTCGAAGTTCTCGTGCACGTGAGTGTAAAGGAGCTTAACACCGTCAACGACGACATGAAGAAGCGCTTGGGCAAACAATAA
- Protein Sequence
- MQLRRGSLPQPTQFRARLRATDMYRYIVVGYRDRARSRRVQAQRKFAQGAYVPQNAAAAAPADNRRDAIQDPSNVTRNHMSAPNLLDVVSLHGLHNPLTSQPVVLLERLRGRQHARVSSPQPSTSQRDPSQPRSIECQDARVSATSVEGPKLRTAKKVKEYKRVHAMSLRSRRLSKLKLNFIAESGASLRKVTFKRKRNSSDEDEPLIYQKNKNKKALQTKNSLKRTAESAPLVGILKHNPPVVTIPEQDVLKVPSNTTKQSVPKKQSAHIVPTPKQIAPKVNTPEKSSSSKKKQRRTSPPIKSLKVKCTRYRTPIQVTPQNKDSEPTPIPELVVSVTVKSEENANDCVDFDDNSAVNGDTSDDWCIPDVPDDPLDTDATLPHNELLLVGLPTESALDVEDARALCGIPATEDARASDVMHATAGEHALDETVAKQGMLAKEGALAIDGMMATEGTLDIEDMITTEDARAFILATEDEIAREDTFVKEDDLAIVPLATEGELAPDETVAKGGILANENEVAFDGFLATESKLNTDGSAADEAVISSDTIIPSLEQDNEPIEDDFLLHFDDNSEDERAVIDKVDNMAEHLDDTVLLEESVPCDPVVTSDVTLENAMKDPPRIRVVSPEPGPSGMQFQFSVYEKSPEAQDDYHSDTKIYLSNNIPEQYFREVFHRTAQNLEFERNRKLQKKTCVGASLRSDRDVINASNNEQVRFELRNDIMSSDSESSDSSIQQETTKRIKQHKCKVAQKKRLAKAKIMYQQVKAEKEKEIAALEALKQVEINRIMAEKNSCEAEKTRYQARFHLMQKEKETELARLKNEMRLKLLAEMEADRSMIAEVDGMARALENERDAKNMNSDKDYIENLDQPSTSGQGSAEAGVLVDAPVYHPTLEEFADPIKFYEKIWPEAVRFGICKIVPPPGWEPPEHKLDDDMNFDVTHQFISRLLSRWGPAARELCAIKLCLLRQKISIHRLPLVDGVEINLPKLYHMVQRHGGLQQVIDKKRWSKVVEDLNFTRGIGTEKKLDQIYVKYLLTYDMLSHEERHEMMAEVEAAWRKKHQKLFDRALNPLYHQKLLLGVQDEPEEETEDPDILEALNESEDCIIRGLRTTHTQFKKIATWMYESVFGQGSESAPPPDVKDIEEAYWRLVTFGAENTCVMSATIDTGEEGYGCVKNTSNSHPWHPKMVSQNRRNVLSYLDSIIGLTVPTLLLGMLYSTSCWHKDPHQIAWKEYQLVGAPRIWYAIGEDQAGDFRKGVEILCPTSAQNKRLWLPSDITMIPPDMLRQQNVTLSRLEQHPGEFVMVFPNAYTSCISTGYSVTESVYFAPPSWLKRLSAVFKETRESCEPTMFAMEHLLYNIARDPTADAEIATTAQPLFERMLHEEVTNRQMLQERGVTFIHQLQSDDAIPSTSSGIRREYSPREQEECEYCRATLFLSKVRGITEHNTLLCLEHALMFLDSVKYKDTDVRHVEVLVHVSVKELNTVNDDMKKRLGKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -