Xash026742.1
Basic Information
- Insect
- Xestia ashworthii
- Gene Symbol
- nfxl1
- Assembly
- GCA_950022955.1
- Location
- OX465560.1:22414853-22417333[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1 5.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.0053 2.9e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 7.2e-08 0.0039 18.7 15.7 3 19 186 202 185 202 0.95 4 19 4.7e-08 0.0026 19.3 10.4 3 19 239 255 237 255 0.92 5 19 1.2e-09 6.5e-05 24.4 12.2 1 19 290 308 290 308 0.99 6 19 0.31 1.7e+04 -2.5 0.3 5 10 332 337 332 342 0.88 7 19 1.3e-06 0.069 14.7 18.2 3 19 345 361 337 361 0.86 8 19 0.62 3.4e+04 -3.4 0.4 7 11 365 369 365 369 0.84 9 19 1 5.4e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 19 3.3e-05 1.8 10.2 20.3 1 18 395 412 395 413 0.97 11 19 2.2e-10 1.2e-05 26.7 14.0 1 19 422 440 422 440 0.99 12 19 0.0001 5.6 8.6 6.4 9 19 488 498 486 498 0.89 13 19 0.5 2.7e+04 -3.2 11.0 1 12 508 518 508 518 0.90 14 19 0.17 9.4e+03 -1.7 3.6 14 18 547 551 547 552 0.87 15 19 0.05 2.7e+03 0.1 0.5 7 12 567 572 567 579 0.83 16 19 4.5e-06 0.25 13.0 5.3 1 11 588 598 588 599 0.97 17 19 0.23 1.3e+04 -2.1 1.3 14 18 612 616 612 617 0.85 18 19 6.3e-05 3.4 9.3 13.2 4 18 630 645 628 646 0.86 19 19 5.1e-07 0.028 16.0 11.9 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- ATGGCGCGCAGATATAGAGACGCCGCTGCAAAATTGCAGCAAAACGTCAAGAAACATCTTAAAGACATGAAAGAACTGTCGTCGTCTGAAGATGAGGATCCTTGCGAGTCTGGCGTCTTGGAAAGCGTGTTCCAGAGCTACTGGCGTGGCGGCGGCGACACTCAAATGGTCAACAGAACGAAGAACCTCCTTGAAGAAGCGATCAGCGGCCGCTCAGTTACGTGTCTCATATGCATAGGATCCATCAAAAAATCTCACGCTATTTGGACTTGTGAGCACTGTTTTTCATACTTCCACCTATCTTGCATCCAAAAATGGGCGAACGATAGTATTAGCTTACGTAGCGAAGAAAGCACAGGTCCTATAGCTGTAATAAAACAACAGAAAATTGAGTGGTGCTGCCCAAAGTGCCGTAACTCTTATTCTAAGGAAGAAATACCTCGAAAATATCGCTGTTTCTGCGGCCAAACTGAAGACCCACCACACCATCCTTGGCTCATTCCTCATACATGTGGTGAAGTCTGTGGAAAGCGGCTATCAACTGGTGATAATTGTAAACACAAGTGTATGTTACTTTGCCACCCTGGTCCCTGCCCTCCGTGCCCACAAACTGTTAACGGCATCTGTTTTTGTGAGAAGGAACGCAAGAGAGTGAGATGCAGTGCTGCTAAATGGTCCTGTGGTCAAAAATGTAAGAAATCACTTTTATGTAAGACTCATTACTGTGAAAATGTCTGTCATGCTGGTGACTGTCCCGAATGTAGCTACACTAGCAGTCAACCATGTCAATGTGGTTCTGAAAAGGCTAAGAGACCATGCAATGATCCATTCTGGCAATGTAAGAAGCGAtgtaacaaattattttcatgTGGCTATCATAAATGTGACAGAGTCTGCCATTCTGGCAACTGCGGTGATTGTCCTAACTCTGGCATGTTGACATGTCCCTGTGGTGCCATCCAGCGCTTTGTCCAATGTCCAGATGTTATGGAAACCTGTATTAGTACTTGTGGAAAAAGGCATGAAGATTGTGAACACAAATGCCCAGAAAAGTGCCACAATGGCAACTGCCCACCATGCCAAGTATTAATTGAGAAGAAGTGCCACTGCTCAACACATACAAGGTCCCTTCCTTGTAGCAAGGACTTCAAATGTGAGACTAAATGTAGAGGTACAAGACTGTGCGGCAAACATGGTTGTGGAAGAAAATGCTGCAATGGTAACTGCCCGCCATGTGAGAAAACATGTGACAAAGGTCTTCAATGTGGTCGGCATAAATGTACAAATATCTGCCATCGTGGACCATGCTATCCCTGCCCTCTAGAATCTAAAGTAACCTGTAGATGCAAAGAAACTTATGTCAGAGTCCCCTGTGGTCGGGAACGGCAGACAAAACCTCCTAAATGCAATTTACCTTGCAAAATAAGGTACAAATGTGGTCATAGCGAAGAAAATAAACATTCATGTCATTTTGGTGATTGTCCACCCTGCAAAGCCATCTGTGACAAGCAGTATCCTAAGTGTAGTCATCACTGTAAAGGGGTGTGTCATGAATATGTTGCAGTGCTGTTCAAGCAAGTAGAGAAACCTGCCACCCCATGGGAAGTGCAACCTCCTAAGACTAAGATCATGACCTTAGATTGTCCACCTTGTGACACACCAGTACCAATGGTTTGTTTTGGAGAACATGAGACAGACCAGCAACCTTGCCACTCAGCTTCTCGGAGGCCTTGCGGAAGAGAATGTGGAAAACCATTGGCTTGTGGAAACCACAAGTGCACTTTACTCTGTCATCTTTATAGCCCTGTTCCAGAGTATCCAAATGTGCCTTCCAACTGTAGGCCATGTAACAGGGAATGTTCAGTTCAGCGTCCTGAAAAATGTGCTCATAAATGTTCTATAAAGGCTTGCCATCCTGGACCGTGCCGACCGTGTGAGATACTTGAACGTTTAGCATGCCACTGTGGAGTTACTGAGATATACCTACGTTGTCGGGAATTGTCTGCAGCTACCGAAGACATGTTATCATGCAAGCAACAATGTCCTAAGAACTTGGAGTGTGGTCATCGCTGCCGGAACACTTGCCATTCAGGACCTTGTGACAACCAAGTATGCACTAAGAAAACTAAAGTTTTCTGCCCATGTGGTAACATTAAAAAGGAGGCTCCATGCAACTCAGTAAGAAAGGGAGAAACAAAGACACTATGTGACCAAACGTGTGAAGCTAAGAAAGCTGCTGCTAAAATAGAGCAAGAGAAAGAGAAGAAGAGATTGAAAGAGTTAGAAGAAGAAAAGAATCGTAAAGAGTTAGAAGAGTATGAGTGGAAGTTAAGtgggaagaagaagaaatataAGGAGAAGAAGATGGTTGTTGACAAAGACAACCATGGTTTCCTAAAGAGGTATTGGGTACCAATATCGTCATTCCTAGTTATGATACTAGCttctatttattatatattttatgtagGATTAGAATAG
- Protein Sequence
- MARRYRDAAAKLQQNVKKHLKDMKELSSSEDEDPCESGVLESVFQSYWRGGGDTQMVNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCEHCFSYFHLSCIQKWANDSISLRSEESTGPIAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGQTEDPPHHPWLIPHTCGEVCGKRLSTGDNCKHKCMLLCHPGPCPPCPQTVNGICFCEKERKRVRCSAAKWSCGQKCKKSLLCKTHYCENVCHAGDCPECSYTSSQPCQCGSEKAKRPCNDPFWQCKKRCNKLFSCGYHKCDRVCHSGNCGDCPNSGMLTCPCGAIQRFVQCPDVMETCISTCGKRHEDCEHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRSLPCSKDFKCETKCRGTRLCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIRYKCGHSEENKHSCHFGDCPPCKAICDKQYPKCSHHCKGVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVPMVCFGEHETDQQPCHSASRRPCGRECGKPLACGNHKCTLLCHLYSPVPEYPNVPSNCRPCNRECSVQRPEKCAHKCSIKACHPGPCRPCEILERLACHCGVTEIYLRCRELSAATEDMLSCKQQCPKNLECGHRCRNTCHSGPCDNQVCTKKTKVFCPCGNIKKEAPCNSVRKGETKTLCDQTCEAKKAAAKIEQEKEKKRLKELEEEKNRKELEEYEWKLSGKKKKYKEKKMVVDKDNHGFLKRYWVPISSFLVMILASIYYIFYVGLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- iTF_01440670;
- 80% Identity
- -