Xash045289.1
Basic Information
- Insect
- Xestia ashworthii
- Gene Symbol
- ZFY
- Assembly
- GCA_950022955.1
- Location
- OX465574.1:8446462-8469787[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.23 32 6.8 0.8 1 23 251 274 251 274 0.92 2 11 0.013 1.9 10.6 0.1 1 23 281 303 281 303 0.98 3 11 2.5 3.5e+02 3.5 0.4 1 10 307 316 307 330 0.78 4 11 0.22 31 6.8 2.1 1 23 337 359 337 359 0.82 5 11 1.7e-05 0.0024 19.8 0.8 2 23 364 386 363 386 0.93 6 11 2.7e-05 0.0038 19.1 1.0 1 23 392 414 392 414 0.97 7 11 0.0053 0.74 11.9 1.1 3 21 427 445 426 450 0.93 8 11 3.4e-05 0.0048 18.8 2.0 1 23 458 481 458 481 0.94 9 11 0.0021 0.29 13.2 0.2 1 23 486 509 486 509 0.97 10 11 1.8e-06 0.00025 22.8 3.1 2 23 516 537 515 537 0.97 11 11 2.5e-06 0.00034 22.4 1.3 1 23 543 566 543 566 0.95
Sequence Information
- Coding Sequence
- atggACGTCAAAGAAGAAGGTGTAGCttataaactattttgtaatgCCTGCCTTTGCGTTGGAAGAACGCTACATaccattacaaataaaaaaacacaaaaatattacattgaTGCGTTGGTCGAAATTCCTCTATTCAGTCTGTCTGCTGTAAACCTGCAGGTGTGCTGGGAGTGTAAAGCCTTGCTGGAGAAGAGCATATCCTTCAGGGAACAGGTCCAGGACTCGTACCGGATACTACAGACTTATACACAAGAGAACCTCCACGAATGTCTCCTAACAGATGTAAGCCGTCCCCCGCGCCTGAAGGTCCATTGCATGGAGCCAACCAGCATATCTCCCTCAGATGGGTATGAAACATCACAGTATACGGAAGTGTCCGTCGTTTGTGTGAAGGATGAGCTTAAGGAAGACTGGGAGAGCGACCATGATCATGATCTAGATGACACAAACATCTTAGGAGACACCAGCCCTCTATCAGATAGTTCAGAAAACACGAAACATTTCGAGTCGGAACTACAGAACATATTGGGCTCTATGAAACGAGATGAAAAGAGGAAGAGAGATAGCAAGACTAAGTTGAAAAGAGACAAGAAGACTAAGAGGGTTAAATTGGATGCAGAAGTAGCTGTTAAGCCAAAACCTTCAAAAGACCAAAACCAAAAGATCTTAACAATAGAGCTCACATACGAAGAGATGCTgctagagagagagagagagtcgACTAGAGAAGCGTACACGAAGGCAGAGTACAAATGTGAGAGCTGCCTCATCGGGTTCAACTATAGCAAGTCTTATACTGACCACGTCACGGCCAGGCACTCAGCGaaCCTAGGTGACTACATTTGTCCTATTTGCAAAACTATAATACCTTCAGTGGAATCATTTACAGCGCATTATAAAAGACACATGAGGAGATATGAATGCAGTATTTGTCAGAAACGAACATTGGATATCAAAGTGATGCAACAGCATTATTACTCGACGCACGAGATATCCCTGAAGGAATATAAATGTAATATATGTGGGAAAATATCCAATTCCATAGACACGCATCGTTACCACAAAGACACGCACAAAGCTAGAGTGCAGTGCACAGAGTGTGACAAAACATTCCGACACAGAGCAGGACTTATGAACCATAGactGGCAGTCCACGAATACCGCAACTCGTTTCCCTGCACCGTCTGTGACAAAGTGTTCCGGTGGAAAACTAGTCTGAAGCGACATTTAGAGAAACATGAAGTGAAGGGTAAGTCATCATCAGCTGAGGCGTACTGCGCGATGTGCAATGTGAGCTTCTCATCGATATTCTCCTTCCAGCGCCATATGAAGAACAGCCTCAAGCATGTCACACACGATCAGCTCAAaTTCATCTGCGACCATTGCAACAAACGATTTGCCGACAAGACAAAGTTAAGAGACCACATCGAAGAGAAACATCTACATCGGACTTATCAATGTCAAATATGTTTAAAGcCTTCTAAAAATCGTGTGGGTTTGGATCAGCATATACGCAACGTGCACAAGAGGCAGAACAATAAGATGTGCCACCATTGTGGTAAAGGATTTCCTACCAAAGTCCAGTTGGAGTCCCACATTCGCAGCCACACTGGCGAGCGACCGTTCATATGTGAATACTGCCCCACCACGTTCTCGCAGCAATCTAACTTATACAAGCATAATAGACAGGTCCACCTCAATATAAAATCCAAGCGATATCCAATGTgtaagaaaaaagaagaaaaactaCCGGATGTACCAATAATAGAGCATGTGCAGCCCATAGACCAATATAGACCGGTCACAATGTTGCATTATACTGCTGAAAAAGTGTTCAGTATGTAA
- Protein Sequence
- MDVKEEGVAYKLFCNACLCVGRTLHTITNKKTQKYYIDALVEIPLFSLSAVNLQVCWECKALLEKSISFREQVQDSYRILQTYTQENLHECLLTDVSRPPRLKVHCMEPTSISPSDGYETSQYTEVSVVCVKDELKEDWESDHDHDLDDTNILGDTSPLSDSSENTKHFESELQNILGSMKRDEKRKRDSKTKLKRDKKTKRVKLDAEVAVKPKPSKDQNQKILTIELTYEEMLLERERESTREAYTKAEYKCESCLIGFNYSKSYTDHVTARHSANLGDYICPICKTIIPSVESFTAHYKRHMRRYECSICQKRTLDIKVMQQHYYSTHEISLKEYKCNICGKISNSIDTHRYHKDTHKARVQCTECDKTFRHRAGLMNHRLAVHEYRNSFPCTVCDKVFRWKTSLKRHLEKHEVKGKSSSAEAYCAMCNVSFSSIFSFQRHMKNSLKHVTHDQLKFICDHCNKRFADKTKLRDHIEEKHLHRTYQCQICLKPSKNRVGLDQHIRNVHKRQNNKMCHHCGKGFPTKVQLESHIRSHTGERPFICEYCPTTFSQQSNLYKHNRQVHLNIKSKRYPMCKKKEEKLPDVPIIEHVQPIDQYRPVTMLHYTAEKVFSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00121715;
- 90% Identity
- iTF_00712230;
- 80% Identity
- -