Basic Information

Insect: Xestia ashworthii
Gene Symbol: -
Assembly: GCA_950022955.1
Location: OX465577.1:5292968-5295000[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.31 43 6.4 2.1 1 23 29 51 29 51 0.95

2 15 1.7 2.4e+02 4.0 0.5 1 12 56 67 56 79 0.80

3 15 0.22 31 6.8 3.4 2 23 87 109 87 109 0.94

4 15 6.2e-06 0.00087 21.1 1.4 1 23 115 138 115 138 0.97

5 15 3.8e-05 0.0053 18.7 1.4 1 23 144 167 144 167 0.96

6 15 7.7e-05 0.011 17.7 2.5 1 23 173 195 173 195 0.99

7 15 3e-07 4.1e-05 25.3 1.6 1 23 211 233 211 233 0.99

8 15 0.00058 0.08 15.0 1.4 1 23 309 332 309 332 0.97

9 15 0.6 84 5.5 1.6 2 23 433 454 432 454 0.93

10 15 1.7 2.3e+02 4.1 1.4 1 20 459 478 459 482 0.78

11 15 0.26 37 6.6 1.5 2 23 490 512 490 512 0.91

12 15 1.9e-06 0.00027 22.8 1.5 1 23 518 541 518 541 0.97

13 15 1.7e-05 0.0023 19.8 2.3 1 23 547 569 547 569 0.98

14 15 2.1e-06 0.00029 22.6 1.4 1 23 575 597 575 597 0.99

15 15 1.8e-06 0.00025 22.8 1.4 1 23 603 626 603 626 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.31	43	6.4	2.1	1	23	29	51	29	51	0.95
2	15	1.7	2.4e+02	4.0	0.5	1	12	56	67	56	79	0.80
3	15	0.22	31	6.8	3.4	2	23	87	109	87	109	0.94
4	15	6.2e-06	0.00087	21.1	1.4	1	23	115	138	115	138	0.97
5	15	3.8e-05	0.0053	18.7	1.4	1	23	144	167	144	167	0.96
6	15	7.7e-05	0.011	17.7	2.5	1	23	173	195	173	195	0.99
7	15	3e-07	4.1e-05	25.3	1.6	1	23	211	233	211	233	0.99
8	15	0.00058	0.08	15.0	1.4	1	23	309	332	309	332	0.97
9	15	0.6	84	5.5	1.6	2	23	433	454	432	454	0.93
10	15	1.7	2.3e+02	4.1	1.4	1	20	459	478	459	482	0.78
11	15	0.26	37	6.6	1.5	2	23	490	512	490	512	0.91
12	15	1.9e-06	0.00027	22.8	1.5	1	23	518	541	518	541	0.97
13	15	1.7e-05	0.0023	19.8	2.3	1	23	547	569	547	569	0.98
14	15	2.1e-06	0.00029	22.6	1.4	1	23	575	597	575	597	0.99
15	15	1.8e-06	0.00025	22.8	1.4	1	23	603	626	603	626	0.98

Sequence Information

Coding Sequence: ATGAAATGCTGCTTATGTACGAGCGATGTCGTTTTTGCCACGTTTAGAAGATTACAGGAGCATATGCACAAACACTACAGACATTTCATTTGTGACGTGTGTGATGCTGGATTCATCAATCATCAGTGTTTCTCCAGTCATAGCGTCACTCACACGACAGGGACCTTTGTCTGCCGACATTGTCCTGCTACATTCGACAACGTGTTGAAAAGAAGTAACCATGAAGTGCGCAACCATACGCAAAAAGGCCAAATGAATAGATGCCATTTATGCAATGAGAGTTTTAAAGAGCATTATTTGAAAGTGTTGCATCTATCTACAGCTCATGGTCTTACAAAGATGTATAACTGCACCGTGTGCGACAGAAATTTTACCACCAACGGTAAGCTTAGAGTACATGTAAGGCGCTTTCATCTGATGGAGAGAAATCACAAATGCTCTGAGTGCGATAGAGCTTTCTTCACACTTCGCGAACTAAAGCAACATATTATGCTAGTTCATACAAGGGCTAAAGAATTTAAATGTGACGTCTGTTCAGGGAATTTTGCTAAGAAGTCTACTTTGACCCACCATATGAAGATTCATAACGATGATAAGCAACATATGCTAGTTCATACAAGGGCTAAAGATTTTAAATGTGACGTCTGTTCCAAGATTTTTGCTAAGAAATCTACTTTGACCCGACATATGAAGATTCATAACGATGAAAAGCGTTATAAAGatataCAAGAAAAAGTTACTACAGCTACGTACATCAAAGTAGAGAAGAAATTGGTACCCATCGAAGAGAACAATACAGCAATAACACCTTGGATGTCAACGCGAGAACGCAAACAACATCTACTACAAAAGCATCTGCACAATCTGAAACTAATCCTAGAATCTACGAATGCGACGATGGTACACAAACATTCAGATAATGGATACATGTGCTGCTATTGCACGAAAGCTTTTCAAGAACCCATAAATTTAAAAGTGCATACTTTAACGGAACATCAAAATGAAGACAAATtcctttacaaaattaaatctaaTGGACCAGATGCGTTTTTAGTCAAACTGGACATAACGAACCTAAACTGCACGATTTGCAGCGCCAACATAGATTCTCTCGATGATATATTCGTTCATCTTACAGagaaacataataaaaacttccatactgatataaaaaatcaaatattcCCTTTCAAGTTCAATACGAAACAAATGAAATGCTGCTTATGTACGAGCGATGTCGTTTTTGCCACGTTTAGAAGACTACAGGAGCATATGCACAAACACTACAGATATTTAATTTGTGACGTGTGTGATGCTGGATTTATCAATCATCAGTGTTTCTCCAATCATAGCACTATTCACACGACAGGGACCTTTGTCTGCCGACATTGTCCTGCCACATTCGACAACGTGTTTAAGAGAAGTAACCACGAAGTGCGCAACCATACGCAAAAAGGCCAAATGAATAGATGCACTTTATGCAATGAGAGTTTTAAAGAGCATTATTTGAAGGTGTTGCATCTATCTTCAGCTCACGGTGTTACAAAGATGTATAACTGCACCGTGTGCGACAGAAATTTTACTACCAACGGTAAGCTTAGAGTACATATAAGGCGCTTTCATCTGATGGAGAGAAATCACAAATGCTCTGAGTGCGATAGAGAGTTCTTCACAGTTTACGAACTAAAGAAACATATGCTAGTTCATACAGGGGCTAAAGATTTTAAATGTGACGTCTGTTCCAAGAATTTTGCTATGAAATCTACTTTGACCCAACATATGAAGATTCATAACGATGTTAAGCGTTATGAATGTACGATATGTCATAAAGCGTTTGTGCAGAAACCCAGCTTGGATTTGCATATGAGAACGAAACACTTTGACTGA
Protein Sequence: MKCCLCTSDVVFATFRRLQEHMHKHYRHFICDVCDAGFINHQCFSSHSVTHTTGTFVCRHCPATFDNVLKRSNHEVRNHTQKGQMNRCHLCNESFKEHYLKVLHLSTAHGLTKMYNCTVCDRNFTTNGKLRVHVRRFHLMERNHKCSECDRAFFTLRELKQHIMLVHTRAKEFKCDVCSGNFAKKSTLTHHMKIHNDDKQHMLVHTRAKDFKCDVCSKIFAKKSTLTRHMKIHNDEKRYKDIQEKVTTATYIKVEKKLVPIEENNTAITPWMSTRERKQHLLQKHLHNLKLILESTNATMVHKHSDNGYMCCYCTKAFQEPINLKVHTLTEHQNEDKFLYKIKSNGPDAFLVKLDITNLNCTICSANIDSLDDIFVHLTEKHNKNFHTDIKNQIFPFKFNTKQMKCCLCTSDVVFATFRRLQEHMHKHYRYLICDVCDAGFINHQCFSNHSTIHTTGTFVCRHCPATFDNVFKRSNHEVRNHTQKGQMNRCTLCNESFKEHYLKVLHLSSAHGVTKMYNCTVCDRNFTTNGKLRVHIRRFHLMERNHKCSECDREFFTVYELKKHMLVHTGAKDFKCDVCSKNFAMKSTLTQHMKIHNDVKRYECTICHKAFVQKPSLDLHMRTKHFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -