Basic Information

Insect: Xestia ashworthii
Gene Symbol: -
Assembly: GCA_950022955.1
Location: OX465574.1:5054909-5079519[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.014 1.9 10.6 1.2 1 23 226 248 226 248 0.98

2 12 0.0034 0.48 12.5 1.5 1 23 255 278 255 278 0.92

3 12 0.4 56 6.0 1.3 1 23 282 304 282 304 0.91

4 12 0.00066 0.092 14.8 4.4 1 23 309 332 309 332 0.98

5 12 8.5e-05 0.012 17.6 2.5 1 23 336 359 336 359 0.97

6 12 0.023 3.2 9.9 0.1 3 20 380 397 379 398 0.95

7 12 0.0014 0.19 13.8 0.2 2 23 412 433 411 433 0.96

8 12 0.00079 0.11 14.5 2.0 1 23 452 475 452 475 0.96

9 12 7.3e-06 0.001 20.9 1.9 2 23 485 506 484 506 0.97

10 12 1.9e-05 0.0026 19.6 1.5 1 23 512 534 512 534 0.99

11 12 2e-06 0.00028 22.7 0.3 1 23 540 562 540 562 0.98

12 12 3.9e-06 0.00054 21.8 2.2 1 23 568 591 568 591 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.014	1.9	10.6	1.2	1	23	226	248	226	248	0.98
2	12	0.0034	0.48	12.5	1.5	1	23	255	278	255	278	0.92
3	12	0.4	56	6.0	1.3	1	23	282	304	282	304	0.91
4	12	0.00066	0.092	14.8	4.4	1	23	309	332	309	332	0.98
5	12	8.5e-05	0.012	17.6	2.5	1	23	336	359	336	359	0.97
6	12	0.023	3.2	9.9	0.1	3	20	380	397	379	398	0.95
7	12	0.0014	0.19	13.8	0.2	2	23	412	433	411	433	0.96
8	12	0.00079	0.11	14.5	2.0	1	23	452	475	452	475	0.96
9	12	7.3e-06	0.001	20.9	1.9	2	23	485	506	484	506	0.97
10	12	1.9e-05	0.0026	19.6	1.5	1	23	512	534	512	534	0.99
11	12	2e-06	0.00028	22.7	0.3	1	23	540	562	540	562	0.98
12	12	3.9e-06	0.00054	21.8	2.2	1	23	568	591	568	591	0.98

Sequence Information

Coding Sequence: ATGGATAAACTGCAAATGTGTAGAATATGTTTAATGGAAAATATTCGAATGCATGTTATCGCAAACAAGGACCTGCAGGAAACATATGAGAAGCTGACTGATATTCCATTAATTACTGAAGACAGTAGACCGCTGCTCGCTTGTTTCTTCTGCTACAACAGACTGAAGCAATGCTGCCAGTTGCAGATGAAATGTCTGGAAGCTGAGGAGCAGTTCGCTCAGATGTTGAATGGGGTGACatcagtaaaaataaaagaagaattagAAAATTATGGTAGATATATCACAACATCGATTCAACATTTGAGTATCTTGGGTGACCAGACAGAATGTAATGACATCAAGGAAGAACTACCTTCTGATTGTGAAGGAATAGGTGATGATGTTGAGCTCAAGGAAGAACTTCACAATGATGATTCAGAACCGGATAATCAAGACATTGGCTATCATGAAGAAGAAATACCACCTCATCAGGCTGCATCAGATTCTGAAGATGATGTTCCTTTAATGAAACTTAAGACGGAAGTGGAAAAAGAACAAGTAGAACCTAAGAAGAAGAAAGGGATCAAGAATAAAATACGCAAACCGGATTGTAGTGAAATAATTCTAAGTAAGACAGAGCAACAGGACAATCTACTAGCGAGATCGAAGTCTTCTAACTATCTTCATTCACCTTTCAAGTGCAGCTCTTGTTACAAGGGATTTGTGGATGCTAGAGCATATGACAACCATAAGATGAAGCATGACTTGTGCAGCGGGCCTCATGTCTGTGACATATGTCATATGCGGTATAGATCGGCGCAACTCTTGCGCACGCACGCAAGCAATGCACACTCTCGCATATTTAAATGCAACAAATGCGGTTATATCTCGCATACGGGGAATCAAGCCAGGATCCACGAGAGATGGCACGATGGACATATCTACGAATGTCAACTATGCAGTCATACGTTCAGGAAACCCACGTCATACCTATCACACATGCGCAAGAGACATCCGACGGAACACGTCTGCAATATCTGCGGAGAGACCTTCGTAGGAAAACACGGACTGCAGATGCATAAAAGGAAGACTCATATCAACGGAGAAAAGATGGTGGACCCCAACGACCCCGAAGACCCCGCTTCTAAGCGGTTCTGCGCAGAATGTAACACTCAGTTTTATAACTCTGAAGCTTGGAAACGACATATATTGTGTTCTGTCAAACATACGCTGAAGACTGAAGAAAGTAAATCCTGCTCTATTTGTCCATGGAAGTATGTCGGTAACATGTCTCTGGAGACGCATATGAAGGAGCACGCGAAAGCTCTACGCAGGTCTAAGAAACCACCCACCACTGCCAAGGAACGGATATTTAGATGCAATCAGTGCGGCTCAAACTTCATGACTCGCTCCAAGCTACAGGCACACAATAACAGGACTCATTTGGGGTTGAAATACAACAAGAATATCGTCTGTGAAGTGTGCGGCAAGAAATGCACGTCAAACGCCACCCTAAAGTATCACCAGCGCACCCACACCGGTGAAAAGCCGTACTCCTGCAGCAGCTGCTCCAAGAACTTCGCGGACAGCAACCAGCTGCGCATCCACACGCGCACACACACCGGAGAGAAGCCTTATGTGTGTGCGGCCTGCGGCAAGAGGTTCACGCAGAAACCGGCGCTTAATAGACATTATAGAGTACACACCGGAGTCAAACCCTACACCTGTCAATACTGTTCGCGAACATTCAGCCAGTCCAACTCACTGAAACTCCACGTAAAAACCGTACATTTGAAACAACCCGCCAACACGAGGAAGAATAAAGCGAAAACCGTGACTCAGGAAACGAAAAccgaaaaaaatgttgaagaattGAGTACACCACTGCAGGATGTAAGGGTGTTCTCGAAATAG
Protein Sequence: MDKLQMCRICLMENIRMHVIANKDLQETYEKLTDIPLITEDSRPLLACFFCYNRLKQCCQLQMKCLEAEEQFAQMLNGVTSVKIKEELENYGRYITTSIQHLSILGDQTECNDIKEELPSDCEGIGDDVELKEELHNDDSEPDNQDIGYHEEEIPPHQAASDSEDDVPLMKLKTEVEKEQVEPKKKKGIKNKIRKPDCSEIILSKTEQQDNLLARSKSSNYLHSPFKCSSCYKGFVDARAYDNHKMKHDLCSGPHVCDICHMRYRSAQLLRTHASNAHSRIFKCNKCGYISHTGNQARIHERWHDGHIYECQLCSHTFRKPTSYLSHMRKRHPTEHVCNICGETFVGKHGLQMHKRKTHINGEKMVDPNDPEDPASKRFCAECNTQFYNSEAWKRHILCSVKHTLKTEESKSCSICPWKYVGNMSLETHMKEHAKALRRSKKPPTTAKERIFRCNQCGSNFMTRSKLQAHNNRTHLGLKYNKNIVCEVCGKKCTSNATLKYHQRTHTGEKPYSCSSCSKNFADSNQLRIHTRTHTGEKPYVCAACGKRFTQKPALNRHYRVHTGVKPYTCQYCSRTFSQSNSLKLHVKTVHLKQPANTRKNKAKTVTQETKTEKNVEELSTPLQDVRVFSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01527600;
90% Identity: iTF_01533299; iTF_01534184;
80% Identity: -