Basic Information

Insect: Xestia ashworthii
Gene Symbol: -
Assembly: GCA_950022955.1
Location: OX465577.1:5271397-5280193[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0015 0.22 13.6 0.8 1 23 92 115 92 115 0.97

2 26 0.15 20 7.4 0.1 1 23 215 237 215 237 0.95

3 26 0.74 1e+02 5.2 2.3 1 23 242 265 242 265 0.94

4 26 0.23 32 6.7 1.6 2 23 273 295 272 295 0.93

5 26 1.3e-05 0.0018 20.1 1.4 1 23 302 325 302 325 0.97

6 26 2.3e-05 0.0032 19.4 1.7 1 23 331 353 331 353 0.98

7 26 7.4e-06 0.001 20.9 3.3 1 23 359 381 359 381 0.99

8 26 0.0011 0.16 14.0 2.0 1 23 497 520 497 520 0.94

9 26 1.1 1.5e+02 4.7 0.8 2 23 547 569 546 569 0.94

10 26 0.0016 0.22 13.6 1.7 2 23 592 613 591 613 0.95

11 26 0.017 2.3 10.3 1.7 1 23 617 639 617 639 0.94

12 26 0.001 0.14 14.2 0.7 1 23 644 667 644 667 0.90

13 26 0.039 5.4 9.2 0.8 1 23 674 697 674 697 0.93

14 26 0.00046 0.064 15.3 0.8 3 23 706 727 704 727 0.95

15 26 0.0018 0.25 13.4 3.3 1 23 733 755 733 755 0.97

16 26 3.9e-05 0.0054 18.6 2.3 1 23 761 783 761 783 0.99

17 26 0.076 11 8.3 1.7 1 23 871 894 871 894 0.94

18 26 0.0073 1 11.5 0.1 2 23 921 943 920 943 0.95

19 26 0.024 3.3 9.9 2.6 2 23 966 987 965 987 0.97

20 26 0.041 5.7 9.1 0.0 1 23 991 1013 991 1013 0.96

21 26 0.0056 0.78 11.8 3.0 1 23 1018 1041 1018 1041 0.98

22 26 0.013 1.9 10.7 1.6 1 23 1047 1070 1047 1070 0.96

23 26 0.058 8.2 8.6 1.4 2 23 1078 1100 1077 1100 0.96

24 26 0.0031 0.44 12.6 1.5 1 23 1106 1128 1106 1128 0.96

25 26 0.0007 0.097 14.7 0.2 1 23 1134 1156 1134 1156 0.99

26 26 5.5e-05 0.0077 18.1 3.4 1 23 1162 1185 1162 1185 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0015	0.22	13.6	0.8	1	23	92	115	92	115	0.97
2	26	0.15	20	7.4	0.1	1	23	215	237	215	237	0.95
3	26	0.74	1e+02	5.2	2.3	1	23	242	265	242	265	0.94
4	26	0.23	32	6.7	1.6	2	23	273	295	272	295	0.93
5	26	1.3e-05	0.0018	20.1	1.4	1	23	302	325	302	325	0.97
6	26	2.3e-05	0.0032	19.4	1.7	1	23	331	353	331	353	0.98
7	26	7.4e-06	0.001	20.9	3.3	1	23	359	381	359	381	0.99
8	26	0.0011	0.16	14.0	2.0	1	23	497	520	497	520	0.94
9	26	1.1	1.5e+02	4.7	0.8	2	23	547	569	546	569	0.94
10	26	0.0016	0.22	13.6	1.7	2	23	592	613	591	613	0.95
11	26	0.017	2.3	10.3	1.7	1	23	617	639	617	639	0.94
12	26	0.001	0.14	14.2	0.7	1	23	644	667	644	667	0.90
13	26	0.039	5.4	9.2	0.8	1	23	674	697	674	697	0.93
14	26	0.00046	0.064	15.3	0.8	3	23	706	727	704	727	0.95
15	26	0.0018	0.25	13.4	3.3	1	23	733	755	733	755	0.97
16	26	3.9e-05	0.0054	18.6	2.3	1	23	761	783	761	783	0.99
17	26	0.076	11	8.3	1.7	1	23	871	894	871	894	0.94
18	26	0.0073	1	11.5	0.1	2	23	921	943	920	943	0.95
19	26	0.024	3.3	9.9	2.6	2	23	966	987	965	987	0.97
20	26	0.041	5.7	9.1	0.0	1	23	991	1013	991	1013	0.96
21	26	0.0056	0.78	11.8	3.0	1	23	1018	1041	1018	1041	0.98
22	26	0.013	1.9	10.7	1.6	1	23	1047	1070	1047	1070	0.96
23	26	0.058	8.2	8.6	1.4	2	23	1078	1100	1077	1100	0.96
24	26	0.0031	0.44	12.6	1.5	1	23	1106	1128	1106	1128	0.96
25	26	0.0007	0.097	14.7	0.2	1	23	1134	1156	1134	1156	0.99
26	26	5.5e-05	0.0077	18.1	3.4	1	23	1162	1185	1162	1185	0.98

Sequence Information

Coding Sequence: ATGTTTCTGGGAAAGAACGTGAATATTGGAAGTAAAGAACTTGACAATAACTCAATCATTTTCTTTATAGATATACAAGAAAAAGTGACTACAGCTACGTACATCAAAGTAGAGCCGACATTGGTACCCATCGAAGAGAACAATACAGCAATAGAACCTGAGACGGCACCGCGACTACGCAAAAAACGACTACTACACAAGCATCTCCACAATCTGAAACTAATCCTAGAATCTACGAATGCGACGATGATACTCAAACATGGAGATAAGGGATATATGTGCTGTTATTGCACGGAAGCTTTCGAAGAACCCATGAATTTGAAAGTGCATACTTTAACGGAACATCAAAATGAAGACAAATTCTATGGCAACATTATAGCTAATGGACCAGCTAGGTTTTTGGTCAAACTGGACATTACAAACCTAAAATGCATGGTTTGCAGCGCTAACATAGATTCTCTCGATGATATATTCGTTCATCTTACAGagaaacataataaaaacttccatactgacataaaaaatcaaatattcCCTTTCAAGTTCAATACGAAACAACTGAAATGCTGCTTATGTACAACCGATGTCGTTTTTGCCACGTTTAGAACACTACACGAGCATATGCACAAACATTACAGACATTTCATTTGTGACGTGTGTGATGCTGGTTTCATCAATCGTCTGTCTTTTTCCAGTCATAGCGTCACTCACACGACAGGTACCTTTGTCTGCCGACATTGTCCTGCCACATTCGATAATGTGTTCAAGAGAAGAAACCACGAAATGCGCAGCCATACCCAAACTGGCAAATTGAATAAATGCCATTTATGCAATGAGAGTTTCAAAGAGTATATTACGAAGGAGTTGCATCTATCTACAGCTCATGGTGCTACTCCAAGGATGTATAACTGCACCGCGTGTGACAGAAATTTTACTACCAATAGTATGCTTAGAGTGCATATAAGGCGCTTTCATCTGGTGGAGAAAAATCACAAATGTTCTGAGTGTAATAGAGCTTTCTTCAGAGTTGGCGACCTAAAGAAACATATGTTAATTCATACAGGGGCTAAAGATTATAAATGTGACGTCTGTTCCAAGCATTATGCTAAGAAATCTACTTTGAACCAACATATGAGGATTCATAACGATGATAAGCGTTATAAATGTAATCAAGAAGCAGCAGTTGTGAAACAAGAACTGGTCGACATAGGACCTACAGAAATAGTTGGTGTGAAACAAGAATCTATAGCAGCTActgaaaatataaatgaaacaCAAGAAACAATAATCGTTACATCTATACAAATAGTAGAAGAAGAACAAGAAACGAGCAACGATACATCTATAGAAAGTGAAAACAACCTAGATAACCTTAAAAAAGAACCTAAAATGACACCGAAAACGGAACTTGTGAAACATCGAAACAACATTTCAGAAATTTTACTGTATTCTAACGCGACCCCCATAAGACGGTACGAAGGGATTGGCTACAACTGTTGCTATTGTCCAGAACAGTTTGAACGGCCTCAAGACCTAAAGAAACATACTCTAGAAAACCACAATAATATTGCAGAAGCAAACTTCATGAAAAAAATGAACATGTCCGAGTATGTCGTCAAATTAGACATAACTGCACTTAAATGCAAGCTATGCAACGATGACTTGGATACTCTAAACAACTTAATACACCATCTTCAAAACGTGCATGAGAAAAACATTGACATGAAGTATACGAACCATATCTTTCCTTTTAAATTCAGTGACGATTTGCTTAGATGCATGTTTTGCGGCCAGACCTTTACTAGATTCAGAGGCCTTGTTGCACATATGCACTTACATTATAGAAATTACATTTGCACGATTTGCGACCTTGGATTCGTAAACCGAAACACGTATACACAACATTCATCCCACCACAAAACAGGGACATTTGTTTGTGATTACTGCCCAAAGGTCTTTACTACTCAAGGAAATAAACGATTTCACGAAAGAGTCGTCCACACACACGGAAAACGCAAATATAAATGTGGTTATTGTAAAGAAATGTTTAAAGAACACGAACAAAAAGTGGCTCACGTGGCGTCCGTGCATAGTGCTGAAGCATTGAGACTAGCATGTCAAGCGTGCGATAGAGTATTCAACACTAGAAGGAAACTAAACACACATATAAAAAAAGACCATCTCATGGAGAAGTCACACAAATGTACACAATGCGACATGGCGTTCTATTCCACGACAAAGTTAAAGAGTCATATGGTCAGCCATACTGGATTGAAAGAATTTCAGTGTTCAGTATGTCTGAAGTTTTTCGGCAGGAGGAAGACACTGAATGTTCATATGAAAACCCATGCTAAAAAGGTGTTTGAATGTAAACCTCAAGCAGATACAGTCGCGATTAAAAAAGAAGTCGACCAACCGGATCAAACTACAAAAGGAAAAACTGCACCGCCGAAAATTGGGGCTGGCCATCCTAGGGTAGCGGGGTCAAACTGCAACAATCCTATAGCTTCAAAATGGTTCAGTTATGAAATTTACAAGCATAAATCGaatattattgaaattatgCGTTGTTCCAACGCTACACCAATAAAGATGTGGGGCGATAAAGGCTACATGTGTTGTCACTGTGGAGACCAATACCCAGAAGCGTCAGATCTCAAGAAGCACACCTTAGAAGAGCATGAAGACGTTTCCAAAACATGCTTCTTGAAAAACATGAGCATGTACCATTACATAGTCAAATTAGACATCACTGATTTGCAGTGCAAGATCTGTAACAAAAGTATCGAAACTGTTGAAGAACTGATGGACCATTTGCAGAATGAACACAAGAAATTAATATATACTGACATAAAAAACCACGTAATCCCTTTCAAATTTAACACAAAACCTCTCGAATGTTTCATTTGCAACAATGTGTTccacaaattcaaattattaacCATACATATGAATAAACACTACAGGAACTATGTATGTGATATCTGCGATGCCGGTTTCGTAAACATTTCTGGAATCAGGCTTCATAAATCTATACACAAGATTGGAAATTACAGTTGCACAACGTGTTCTATGACTTTTGAAACAAAGGCCAAGAGAAACCGACATGTAAAGACTAAGCATGCCAAAGAGATTCGCCACACATGTGGGTACTGCAAAGAAAGTTTCAATGATTATAGAAAGAAGGAAGCTCATCTAATAACTGCCCACGGACTGACGCAGCCGAAGTTGAAATGCCAAGCGTGCGACAAATTATTTGATCACCAAAAACGTTTAGCCGTGCACGTGAAGAGAGACCATTTGATGGAAAGACCACATGCTTGCACAGTGTGCGAAAAGAAATTCTTCGCTTTAGGAGAGTTGAGAAATCATATGACAAAACATACAGGAGAGAGACCTTATAAGTGCGAAGTTTGTTTAAAGGCGTATGGATTGGCGAAAACATTGAGAGAACATATGAGGATTCATAATGATGATAGACGTTTTAAATGCGAACAGTGTGGGCAGGCTTTCGTCCAGAAATGCAGCTGGAGGAGTCATATGAAAACTAAGCATGGGGAGAAAGTTTGA
Protein Sequence: MFLGKNVNIGSKELDNNSIIFFIDIQEKVTTATYIKVEPTLVPIEENNTAIEPETAPRLRKKRLLHKHLHNLKLILESTNATMILKHGDKGYMCCYCTEAFEEPMNLKVHTLTEHQNEDKFYGNIIANGPARFLVKLDITNLKCMVCSANIDSLDDIFVHLTEKHNKNFHTDIKNQIFPFKFNTKQLKCCLCTTDVVFATFRTLHEHMHKHYRHFICDVCDAGFINRLSFSSHSVTHTTGTFVCRHCPATFDNVFKRRNHEMRSHTQTGKLNKCHLCNESFKEYITKELHLSTAHGATPRMYNCTACDRNFTTNSMLRVHIRRFHLVEKNHKCSECNRAFFRVGDLKKHMLIHTGAKDYKCDVCSKHYAKKSTLNQHMRIHNDDKRYKCNQEAAVVKQELVDIGPTEIVGVKQESIAATENINETQETIIVTSIQIVEEEQETSNDTSIESENNLDNLKKEPKMTPKTELVKHRNNISEILLYSNATPIRRYEGIGYNCCYCPEQFERPQDLKKHTLENHNNIAEANFMKKMNMSEYVVKLDITALKCKLCNDDLDTLNNLIHHLQNVHEKNIDMKYTNHIFPFKFSDDLLRCMFCGQTFTRFRGLVAHMHLHYRNYICTICDLGFVNRNTYTQHSSHHKTGTFVCDYCPKVFTTQGNKRFHERVVHTHGKRKYKCGYCKEMFKEHEQKVAHVASVHSAEALRLACQACDRVFNTRRKLNTHIKKDHLMEKSHKCTQCDMAFYSTTKLKSHMVSHTGLKEFQCSVCLKFFGRRKTLNVHMKTHAKKVFECKPQADTVAIKKEVDQPDQTTKGKTAPPKIGAGHPRVAGSNCNNPIASKWFSYEIYKHKSNIIEIMRCSNATPIKMWGDKGYMCCHCGDQYPEASDLKKHTLEEHEDVSKTCFLKNMSMYHYIVKLDITDLQCKICNKSIETVEELMDHLQNEHKKLIYTDIKNHVIPFKFNTKPLECFICNNVFHKFKLLTIHMNKHYRNYVCDICDAGFVNISGIRLHKSIHKIGNYSCTTCSMTFETKAKRNRHVKTKHAKEIRHTCGYCKESFNDYRKKEAHLITAHGLTQPKLKCQACDKLFDHQKRLAVHVKRDHLMERPHACTVCEKKFFALGELRNHMTKHTGERPYKCEVCLKAYGLAKTLREHMRIHNDDRRFKCEQCGQAFVQKCSWRSHMKTKHGEKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -