Basic Information

Insect: Xestia ashworthii
Gene Symbol: -
Assembly: GCA_950022955.1
Location: OX465551.1:17861172-17878513[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9.4e-05 0.013 17.4 2.2 1 23 431 453 431 453 0.97

2 20 0.0035 0.49 12.5 0.6 1 20 459 478 459 481 0.94

3 20 2.5e-05 0.0034 19.3 5.6 1 23 500 522 500 522 0.98

4 20 0.00011 0.016 17.2 4.1 1 23 528 550 528 550 0.99

5 20 4.4e-05 0.0061 18.5 5.3 1 23 556 578 556 578 0.97

6 20 1e-05 0.0014 20.5 7.4 1 23 584 606 584 606 0.97

7 20 8.4e-07 0.00012 23.9 2.9 1 23 612 634 612 634 0.97

8 20 0.00012 0.017 17.1 6.7 1 23 640 662 640 662 0.97

9 20 0.00012 0.017 17.1 6.5 1 23 668 690 668 690 0.97

10 20 5.7e-07 8e-05 24.4 1.9 1 23 696 718 696 718 0.98

11 20 1.1e-05 0.0016 20.3 7.7 1 23 724 746 724 746 0.98

12 20 3e-05 0.0042 19.0 6.6 1 23 752 774 752 774 0.98

13 20 2.3e-06 0.00033 22.5 4.2 1 23 780 802 780 802 0.98

14 20 7.8e-06 0.0011 20.8 5.0 1 23 808 830 808 830 0.96

15 20 1.3e-05 0.0018 20.1 5.2 1 23 836 858 836 858 0.98

16 20 3.6e-06 0.0005 21.9 6.0 1 23 864 886 864 886 0.98

17 20 1.3e-05 0.0019 20.1 7.7 1 23 892 914 892 914 0.97

18 20 2.9e-05 0.004 19.0 7.7 1 23 920 942 920 942 0.98

19 20 0.00086 0.12 14.4 0.3 1 23 949 971 949 971 0.96

20 20 0.37 51 6.1 4.9 1 23 982 1004 982 1004 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9.4e-05	0.013	17.4	2.2	1	23	431	453	431	453	0.97
2	20	0.0035	0.49	12.5	0.6	1	20	459	478	459	481	0.94
3	20	2.5e-05	0.0034	19.3	5.6	1	23	500	522	500	522	0.98
4	20	0.00011	0.016	17.2	4.1	1	23	528	550	528	550	0.99
5	20	4.4e-05	0.0061	18.5	5.3	1	23	556	578	556	578	0.97
6	20	1e-05	0.0014	20.5	7.4	1	23	584	606	584	606	0.97
7	20	8.4e-07	0.00012	23.9	2.9	1	23	612	634	612	634	0.97
8	20	0.00012	0.017	17.1	6.7	1	23	640	662	640	662	0.97
9	20	0.00012	0.017	17.1	6.5	1	23	668	690	668	690	0.97
10	20	5.7e-07	8e-05	24.4	1.9	1	23	696	718	696	718	0.98
11	20	1.1e-05	0.0016	20.3	7.7	1	23	724	746	724	746	0.98
12	20	3e-05	0.0042	19.0	6.6	1	23	752	774	752	774	0.98
13	20	2.3e-06	0.00033	22.5	4.2	1	23	780	802	780	802	0.98
14	20	7.8e-06	0.0011	20.8	5.0	1	23	808	830	808	830	0.96
15	20	1.3e-05	0.0018	20.1	5.2	1	23	836	858	836	858	0.98
16	20	3.6e-06	0.0005	21.9	6.0	1	23	864	886	864	886	0.98
17	20	1.3e-05	0.0019	20.1	7.7	1	23	892	914	892	914	0.97
18	20	2.9e-05	0.004	19.0	7.7	1	23	920	942	920	942	0.98
19	20	0.00086	0.12	14.4	0.3	1	23	949	971	949	971	0.96
20	20	0.37	51	6.1	4.9	1	23	982	1004	982	1004	0.99

Sequence Information

Coding Sequence: ATGAATCAGGATCACCACAATATGAATACGGGTGGTGGCCAGCCCCCGGGAAGTTCTGAGTCACAGGGCCAAAGAGTACAGGCCACCCAGCAGCAACAGCAGAATAACTTGCCTGCCACGACATCTGCTACCGATTTACGAGTGAACTCAGCAGCAGTGAACGTTGCTTTGTCTAGTGTCGCGAAATATTGGGTGTTTACGAATTTATTCCCCGGTCCGATTCCGCAAGTGTCTGTGTATGGATTGCCTGCCGGTGCCAGGATAGAAAATGGGAAACCAGTTCAGGATCTTGGTCAAGCTCATGCAAGTATACTGAATGGTGATCCAAATATTATACTTGGGCATCATGCAGGCCAGCCCCAAGTCACGGTGTCTGCTGCTGGTGGTCAGCAGATACCAGTCTCACAGATCATTGCCACACAATCTGGACAAACTCATGAAGCTCTTGTGGCCCATAGTCAGCAGCAAGCTGAGCTGGTGGCGGCCCAGAACTCCGGCAACAATGCCCAGGTGTCAGTTAGTGCAGGCCAGGCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGACACCATACCCAACAACACTTAATGCAGCAACAATTGATGGCGCAGGCGCGACCAGACCACAACAACCAACAGATTCAACTGACGGTGAGCGAAGATGGCATAGTGACTGTGGTGGAGCCCGCCGGTACGAAGATGGTCGACAAGGAAGAACTCCATGAGGCCATCAAGATGCCTAACGATCACACCTTGACTGTGCACCAGCTACAACAGATAGTGGGACAACAGGTGATAGACAGCGTAGTACGCATAGAGCAAGCGACCGGTGAGCCGGCGAACATTCTAGTGACCCACAACCCTGACGGTACTACCTCTATTGAAGCCAGTGCTGCTGACCCTCTGATTGTCAAGGACGAGAAGAATTCTAACAAAATAGAGACTGCCCAGTTTGCTATACCTGCTGAGATAAAGGATATAAAGGGCATTGACTTAAAGAGTGTAGGTGCCATGGGCATGGAAGGTGCAGTAGTAAAGATCTCAGCCGGCGCGTCGGAGCACGATCTTCATGCGATGTATAAAGTCAATGTGGAAGATCTGTCACAGCTGCTTGCTTACCATGAAGTGTTTGGGAAACTTAATGCGGAAGGCCAACCCCAGCAAGCAAAGgtaATAAGCGAGGTGGAAGTAGAAGTGGAAGCTGGTACCAGCGCAGGCATGTCAGAAGCGGAATCTTCTCCTGGCCACCATTCATGTGATATCTGCGGGAAAATATTCCAGTTCAGATACCAACTTATTGTTCATAGGCGTTATCACGGCGAAAGTAAACCATACACGTGTCAAGTTTGTGGTTCCGCATTCGCTAATCCTGTCGAATTGTCGAGACATGGAAAATGTCATCTTGCCGGAGACCCGAACGAGAGACACGCCAAGCGGATGGCCCAGGACAAGCCATACGCATGCACCACTTGCCACAAGACTTTCTCTCGTAAAGAGCATTTGGACAACCACGTCCGAAGTCATACTGGAGAAACTCCGTACAGATGCGAATTCTGCGCGAAGACTTTCACCCGCAAAGAGCACATGGTCAACCACGTACGAAAACATACGGGCGAAACTCCACACCGATGTGACATTTGCAAGAAGAGCTTCACACGAAAAGAGCACTTCATGAACCATGTTATGTGGCACACAGGTGAGACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGATACTCCGTTCCGATGTGAACTGTGCGGCAAGTCGTTCACAAGAAAGGAACACTTCACCAATCACATACTGTGGCATACGGGAGAGACCCCGCACCGTTGTGACTTCTGCTCGAAGACGTTCACTCGTAAAGAGCATCTCCTGAACCACGTCCGGCAGCACACGGGCGAGTCGCCTCACCGCTGCAACTTCTGCAGCAAGTCATTCACCCGGCGAGAACATCTCGTCAACCACGTACGACAGCATACTGGGGAGACGCCCTTCCAGTGCGGATACTGCCCTAAAGCATTCACAAGGAAGGATCACCTCGTGAACCATGTCCGGCAGCACACAGGCGAGTCCCCGCACAAGTGCTCGTACTGCACAAAGTCGTTCACTCGCAAGGAGCACCTCACGAACCACGTGCGACAGCACACCGGCGAGTCGCCGCACCGATGTACTTACTGCGCCAAGTCCTTCACTAGGAAGGAACACCTCACCAACCACGTCAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTACTGCCCGCGGGCCTTCGCGCGCAAGGAACATCTCAACAACCACATCCGTCAGCACACCGGCGTCACGCCGCATGCCTGCTCCTACTGCAGTAAGAGCTTCACCCGGAAGGAACATCTCGTTAACCATATCCGGCAACACACAGGCGAGACTCCGTTCAAGTGTACGTTTTGTTCAAAGTCGTTCTCTCGTAAGGAGCACCTTACGAACCACGTGAACCTTCACACAGGAGAAACGCCCCACAAATGTCCCTTCTGCACAAAAACATTTTCCAGAAAAGAACACTTGACCAATCACGTCAgGATTCACACAGGCGAGTCTCCGCACCGCTGTGACTACTGCCAGAAGACGTTCACACGTAAGGAGCACTTGACGAATCACTTGAAGCAGCACACTGGAGACACCGCACATGTCTGCAAGGTGTGCTCCAAGCACTTCACCAGGAAGGAACACCTTGTCACGCACATGAGGTCGCACAGTTGTGGCGAGCGTCCATTCAGTTGCGGCGAGTGCGGCAAGTCTTTCCCCTTGAAAGGCAACCTATTGTTCCATGAACGATCgcacaacaaaaacaatgccAACGCCAATAAGCAGTACCGCTGTGAAGTCTGCTCTAAGGAATTCCTTTGTAAAGGCCATTTGGTTTCTCATCGGCGTACACACGCCGAGTGGGCGGAAGGCACCGCGGCGGGCGAGGCACCCGCTGAAACAGAAGACTGTACTGATAATAAGTGTATCAAAGTCGAGCCAGAAAGAACTGAAAGGAAACATGAAGTCAGGACAACAGTCGAAACGAGACCAGCAGAGCAGAACAATGTCGCACAAAGTCAATCAAACACACCAACTGTGATGATAACGAATAATCAACAAGTGCGCGCGGCGACCGTGAGCACGGTGGGCGCAGTTGGCGCTGTGGGCACTGTAGGCGCTGTGAACCCGGCGCCCACCTTCGTGACGCACCACGCGGGCGGCAACATCGCGCACCATCCCGTCACCGTCAACTACTAG
Protein Sequence: MNQDHHNMNTGGGQPPGSSESQGQRVQATQQQQQNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQPQVTVSAAGGQQIPVSQIIATQSGQTHEALVAHSQQQAELVAAQNSGNNAQVSVSAGQATHQQVPNNRVEFVQHHNIDMVNHVGHHTQQHLMQQQLMAQARPDHNNQQIQLTVSEDGIVTVVEPAGTKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKNSNKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNAEGQPQQAKVISEVEVEVEAGTSAGMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGVTPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDYCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNNANANKQYRCEVCSKEFLCKGHLVSHRRTHAEWAEGTAAGEAPAETEDCTDNKCIKVEPERTERKHEVRTTVETRPAEQNNVAQSQSNTPTVMITNNQQVRAATVSTVGAVGAVGTVGAVNPAPTFVTHHAGGNIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707182;
90% Identity: iTF_01030446;
80% Identity: -