Xash009679.1
Basic Information
- Insect
- Xestia ashworthii
- Gene Symbol
- -
- Assembly
- GCA_950022955.1
- Location
- OX465550.1:23134975-23135289[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-09 2e-06 28.9 0.0 1 41 15 54 15 56 0.96
Sequence Information
- Coding Sequence
- ATGCCGCGTGGTTACATTCGGAAAACAACTCGCCAAAACTGGAGTGAGGATGCCATGCTGAAGGCACTAGACGCTGTGAAAGAGGGAATGCCCTTTAAAACGGCCAGTAAACAGTTTTCTATTCCACTGATGACATTAAAAAGAAGAATCAAAGGCAAGAATAAGTTTGCTGTTGGTGCAGTTAAGTTGTTGGGTAGTAAACAAACAGTCTTCACGCCCGACCAAGAAAGAGAACTCGTCCAGCACATAAAAGATATGAAATCAAGGATGCATGGTCTTACAAAGCAGGTCTTACAAAACAGATCGTTGCAGTAA
- Protein Sequence
- MPRGYIRKTTRQNWSEDAMLKALDAVKEGMPFKTASKQFSIPLMTLKRRIKGKNKFAVGAVKLLGSKQTVFTPDQERELVQHIKDMKSRMHGLTKQVLQNRSLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00375131;
- 90% Identity
- iTF_00375131;
- 80% Identity
- -