Xash021097.1
Basic Information
- Insect
- Xestia ashworthii
- Gene Symbol
- clz9
- Assembly
- GCA_950022955.1
- Location
- OX465557.1:17476925-17478037[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-08 1.8e-05 25.9 0.0 1 39 8 45 8 50 0.88 2 2 0.92 6e+02 1.8 0.0 24 45 77 98 73 98 0.87
Sequence Information
- Coding Sequence
- ATGgcgcctattaaaaattatacTCCTAAGCAAATGGGAGATGCCATTGAGGCGGTACGAGGTGGTGAATCTGTAGCGGCTGCAGCAAAGCGCTTTGGAGTTCCGCGGATCACTTTATACAACAAAATATCAGGTAAAAGCCCCATGCAATGTAGTATGGGACCAACTACTGTACTAACAAGCACAGAAGAGGATTTGTTGGTAAAGTGGCTTTTAGCGATGGCTGAAAGAAGATTTCCTATCTCCAAAGAAACTCTCCTAGATAGTGTTCAGCGGATCATCACAGTGCAAAACAAATCCAATCCTTTCACGAAAAATAGACCAGGTAGAAAATGGTTTGCATCATTCTTAAAAAGACATCCCATAATAGCACAAAGAACAGCAGAAAATTTAACCGCTGCACGAGAGAACGTGACTGAAGAAGAAATAGTCTCCTGGTTTCGAGAGATACAAGAATATTTAACATCTGTCGATTTGCATCAGGTGCTCGAAGATCCAAGCAGAGTTTTTAACACAGACGAAAGCGCATTCTTTCTTTCACCAAAACCTGGACAAGTGCTTGTGAAGCGGGGTGAGAAACATGTCTATGCTGCAAGTGGCGATGAAAAGGAGAATTTAACAGTTTTGGTGACTGCGAATGCTGCGGGAAAACTTGCACCGCCGATGATAGTTTTCGCTTATGAAAGGATCCCAGCCAACATTGCTAACAGTGTGCCGGAAGATTGGGGCATAGGTAAGTCCGAGAGTGGTTGGATGTgtagtgagaccttttatgaatACATTACCGGTATTTTCAATCCTTGGCTGGTAAAAGAACAGATTCAAAAACCAATTCTGTTTTTCGTAGATGGTCACAAGTCCCATCTAACACTTCAACTGTCGCAGTTTTGTTCTGAAAACGGTATTGAAGTGATTGCCTTATACCCAAACTCGACCCACATACTTCAACCTATGGACATTTCCGTATTTAGGCCGTTAAAAGTATTCTTTCGCAAAGAAGTTATTGCGTGGTGTGAAAGGTTCGTGGGCTATGACGAAGAAAAACCGCTGGATCTTCAGAGTatggatttatttattgtaaaaaggaCATGTTACTTCGCCGCCATATTTTAA
- Protein Sequence
- MAPIKNYTPKQMGDAIEAVRGGESVAAAAKRFGVPRITLYNKISGKSPMQCSMGPTTVLTSTEEDLLVKWLLAMAERRFPISKETLLDSVQRIITVQNKSNPFTKNRPGRKWFASFLKRHPIIAQRTAENLTAARENVTEEEIVSWFREIQEYLTSVDLHQVLEDPSRVFNTDESAFFLSPKPGQVLVKRGEKHVYAASGDEKENLTVLVTANAAGKLAPPMIVFAYERIPANIANSVPEDWGIGKSESGWMCSETFYEYITGIFNPWLVKEQIQKPILFFVDGHKSHLTLQLSQFCSENGIEVIALYPNSTHILQPMDISVFRPLKVFFRKEVIAWCERFVGYDEEKPLDLQSMDLFIVKRTCYFAAIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -