Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: Rreb1
Assembly: GCA_963575645.1
Location: OY754473.1:39799866-39806421[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.012 0.25 12.4 0.7 1 23 47 69 47 69 0.98

2 15 0.00075 0.015 16.2 0.2 1 23 92 114 92 114 0.98

3 15 8e-05 0.0016 19.3 4.2 1 23 120 142 120 142 0.99

4 15 1.6 33 5.7 0.2 2 23 239 262 238 262 0.92

5 15 0.056 1.2 10.3 0.5 1 21 344 364 344 365 0.95

6 15 0.41 8.4 7.6 0.1 1 23 528 550 528 550 0.96

7 15 0.00077 0.016 16.2 0.3 1 23 560 582 560 582 0.98

8 15 0.0047 0.097 13.7 3.1 1 23 588 611 588 611 0.97

9 15 0.0047 0.096 13.7 2.1 1 23 1126 1149 1126 1149 0.95

10 15 0.00049 0.01 16.8 0.4 2 23 1497 1518 1496 1518 0.97

11 15 0.71 15 6.8 6.3 1 23 1524 1547 1524 1547 0.97

12 15 0.32 6.5 7.9 4.3 1 20 1592 1612 1592 1616 0.95

13 15 0.43 8.8 7.5 0.6 1 23 1718 1741 1718 1741 0.96

14 15 0.093 1.9 9.6 0.5 3 23 1802 1822 1800 1822 0.93

15 15 0.052 1.1 10.4 6.0 1 23 1828 1850 1828 1850 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.012	0.25	12.4	0.7	1	23	47	69	47	69	0.98
2	15	0.00075	0.015	16.2	0.2	1	23	92	114	92	114	0.98
3	15	8e-05	0.0016	19.3	4.2	1	23	120	142	120	142	0.99
4	15	1.6	33	5.7	0.2	2	23	239	262	238	262	0.92
5	15	0.056	1.2	10.3	0.5	1	21	344	364	344	365	0.95
6	15	0.41	8.4	7.6	0.1	1	23	528	550	528	550	0.96
7	15	0.00077	0.016	16.2	0.3	1	23	560	582	560	582	0.98
8	15	0.0047	0.097	13.7	3.1	1	23	588	611	588	611	0.97
9	15	0.0047	0.096	13.7	2.1	1	23	1126	1149	1126	1149	0.95
10	15	0.00049	0.01	16.8	0.4	2	23	1497	1518	1496	1518	0.97
11	15	0.71	15	6.8	6.3	1	23	1524	1547	1524	1547	0.97
12	15	0.32	6.5	7.9	4.3	1	20	1592	1612	1592	1616	0.95
13	15	0.43	8.8	7.5	0.6	1	23	1718	1741	1718	1741	0.96
14	15	0.093	1.9	9.6	0.5	3	23	1802	1822	1800	1822	0.93
15	15	0.052	1.1	10.4	6.0	1	23	1828	1850	1828	1850	0.98

Sequence Information

Coding Sequence: ATGGACACTTCGAGTGACGACTTAAAAAACGGCCAAGAAGAATCGTCGATGAACTGCAACGGCGTCCCAGAAAATTCGAACGACAACGCGACTTCCGATCGAGAATCGCCGCGATCGAGCGACGCGGGCGATTTGAAATACAGCTGCCCGATGTGCGGGACGGAGCTGCAAACGCAACACGACGTCACGCTGCATTTGCGATCGCACAACAATTCCGTCGAAAACAACGGATTGAATCAACAACAGTGTCAGAGCGGCGACGTCTGCAAATCGTTCGTGTGTCGAATATGTTCGAAAGTGCTCAGTTCGAATTCCAGTCTGGACCGACACCTCCTCGTTCACAGCGGTGAGCGGCCGTTCAGGTGCAAATATTGCGCGGTGACATTCACGACGAACGGAAATATGCACCGGCACATGCGCACTCACTGTCAGACGAACTACGAATCAGACGGAAGTACCGATAGCAATGCGAGCGCTCAGTCGGGCAACTGCAACGCCAAAGCGACCAGAAAGAGACGTTACGAATACAACAACAACAAAGTTTCGACTCTGGACAGTCCCGACGTCAACAGAAAAAAGTACAGCGAAACCGAGGAGGAGAGCtgcaagaaaagaaaaatcGACTGTTCGGAAATAAGCGAGGACGACAGCGCGACGaacaagagaaaaataaaaaatgtcaataataataacgaaCTCGTCCCGCAAAAACTGCAGTGTCCCGTTTGTGAACGGAAAGATTTTGTCTCtttgaattattttgaaaagcaCATCGAAGAAACGCATCCCGAATACGAAATTAAATGCCACTCTTGTAATTTGGGTTTTAAGAACTATCGAGTTTTTCATTTACATAGATTTATGGTTCATCAGGACGAGCGGAATGTAAACAGcgtaaaaaatgtaaagaatTCTATTGTGGGTTTCAAAGATCTGAATTTTGTAGATTTTACTAGCGAGAAATTTCCGATCATCGCGAAATCGTTTTGCGAGAAATCGTTCAGACGAGCCGACAATAACGACTTGAAATTCGAATGTGAAAAGTGCGGGCGGGCGTTCCCGTGCCACAGTGCGCTCGAAATTCATCAGAACGactgtttgaattttcaaaacgcatatTACAAAGACGAAGATCTGCCGACCGATTATTCTTCTAAACTCGACAAGTCCGACGAGAATATGAAAAGAGAAGACTTTTTCGCAATACTGGACTTGCAAAACAAATCCATCAAGCCTGAACCAAAAGCACAGTCTGTCAGTTCGACCGTTCCAGAGATGGCGAACGAACTGCCCAGATTGAAATTGAAGGAATATTTGAGCATGAAAAAACCGGAAACACTGACCGGAACGTCGCGTCCGGTCGACACCACCAAAGATTTGGCCGACATTCAGTCGATTTTGTCGGTAACATCTACGGGAGGCCTCTTACAACAACTGACGGCGCCTAAGACCGTACAAGAAGAACAGCACGTCGGTCATTCTGACGCGATGTTAAAACAATCGGCGGCCAATGAAGCGACGGAAGAAGAATTGCAAGACGCTTTCGCCGCCGAATTTCGTAAAATGAAATTGCGCGGGGAATTCCCGTGTCGACTCTGCACGGCCGTGTTCCCGAACCTCAGAGCTCTGAAAGGCCACAATCGGGCGCATCTTTCCGGCAGCGGTAACACGGGACCTTACAGGTGCAACATGTGTCCGCACAGCTCGGTCGACAAAGCCGCTTTGATCAGACACCTGCGAGGACATAACGGGGACAGACCTTACGAGTGTTCGCTGTGTAATTATGCTTTTACGACTAAAGCCAACTGCGAGCGTCATTTGAGAAACAGGCACGCCAAAGTGACAAGAGAAGAAGTCAAGAAAGCCATCATCTATCATCCGTCGGAAGATCCGACGAACGATGAAATGACTACGAAATTTTATCAGTCGTCGATAAAGCTGGAGGACATGTCCTCTTCAAAATCGTACGGCTCGCGCGAAGATATAAAAAGATCTCTTTTTCCAACGTCGTCCTTACATCGCGATAAACAAACGGACATACATAAATTAAGTAACTCTTCACAATCTTCGTTCACATCTAACGACGATCAGAATACTCAGTCGATTCCCGTTGCAGTCATTCCGAAAAGTATTGCCTCTTTGACGGCACCTCTGCAGCTGAAGGATACAATTTCTGCTTTCAACATTCCGTTCGTGAACGATAACCTGATGGCCAAGTCGTTCACTCTGCCATTTACAAAGGACAACTTAACAGCTCTGAAAGAACACAGGATTGCTCCCAAAACTCCGGTAATTGGCAGTTCTGGAATTTTGAATCTTTCGGCGGAAAATTCGCATCAAGATCGAATTATGAATTGCTCGCCCATTATCGTTGACGACGAACCGAAATCGTTCCAGCCTCTCAAGCAAATACCTGAGTACGAATCTTCTGAAAATGAACATTCAGATTCGGAAACCGAAGAGAAAACTACGCTCGACATCACCGATACCCCGCGTTCCCGTCATTCGCAGTTTAGGATCGTCGATCAACGAAAAATGCTGAACACTCCGCCAGAACATCCGATAGATTTGAGCATGGACGTCTTGGACTTGAGCAAAAAGAGGTCACCCACGCCTCAAGACATCGAAGAGGACGATGAAGAAGAAGAAAACTGTTCAGTACAAAACAACGACGAGGCTCAAGATTTCACCAAAAAAGCTTTAGATTATTCAACGCCGCCTTCATCGCAAAATTTAAACAACGCACTCAGGAATCATTTGCCGCCCGAagcaattttcgaaaaaacacaACTTTTGTTAGCTCAACAATTGCTGAAATCGAACGCCGCTCCGATCACGCCGACAGCAAACAGCTTTTACGCAAACCAGCTGCATCAGTTTTACAGACACAGTCCGTTTCCCAACGTGCCGGCATTCCCGTTGAATCCATATTTCCTCCAACCGCATCCGTTTTTAACACCGACGGCCAGTCCGCAAGACTTGCAAGAAATGAAGGAGCGAATCCAAAAAGAAATAATTCGCGGCTTACAGTTGAGCGGAGGAAGTCTAGTTATGGATCACATGTCGTTGGCGTCGGAAAGACTTCAAGCATTTCATCAACAAGCCTTGTCTAATTTAAAACCGGACATCAAACCGGAATACAAATACAATACTTCGATTAAAACCGAAGACGTAAAAACACCGATAATCCCGTTACAAGTCGAAACAAATCAATTTTCCGATATGAATTCGATGAAACTCAAGTCGCCGAAAAATCAGATAAAATCGTCGACTGAAATTATAACGCCCGTGACGCCGAATTCGGTTAAAATGGTGATTAAGAACGGCGTTCTGATGCCGAAACAGAAACAGCGACGATACCGAACGGAGCGGCCGTTCGCCTGCGAACATTGTTCGGCCCGATTTACGCTGCGATCGAACATGGAGCGGCACATCAAACAGCAACACCCGCAGTTCTGGTCTCAGCGTCAGCGGTCGAATATGAGCGGAGTTCCGGGTCGAAAGTCAACTTTGCCGACAATGACGCCTCCGCAAAACAATAATCAGGCGCTGAAACAGAATTATTTCGATCAAAATGCCGGCCTGCAAAATAACGACTATGCGTTACCAAAGAATTCGCCGAATTTAATTTTACCAAATACAAATACCAAAGATGAACTGATCACGAATATGGCTTATTTAAGCAAACCCTTGTCTATCACAGATCAGATACGCTATTCTTTATTGACGCAACAATTGAAACAACAATCGAACGAACTTAAAACGTCTGTTGAGCAGATGGAAACTACGACGactgtcgaaaaaaattattcgaaaacaATTGACGACTCTGAAAATGAAAATGACGAGACCGAAGACGCCTTGATTATAGACGAGGGCTCGCAATCTCAGTCGAACGATGTCCAAAGAGAAAGTGTGCGAATTGCTCAATTTAATTCGGGCGAAAATCGCGACGAATCGCGCAAATCTCTCGAAGATAAATTGTTAGAACTGAGAAAAATACGCGAGAAAATTTTATTGGTCGAACAGAACGAAACTGTCGATTTAAGTCAAGGGCAGGAAAGTTTTGGCGATGAAAAACGAACCGACAGATCGGATAAACTCGACGATACCGCAAATAGCTTCGAAGAAGACGCAGCGGTCTCGACGGCAGTTTCGGATGCGTCGAAAATTCAACAAAACAGCATCTCTAAAATAACAAAGCCGGAAGACGGAGGACAGGATCTGGTTCCTGTTTCGCGTCTGTTGGATAATGCGGCTAGTGCTCAACTGCCGTTCCGCGAGTACTTCAGGAGAGAAGGCGAAGATCACGAAACTCCGAGTGAAGAAGACGAAGACGGATTCATAGCCAGCGGAAGTACCAGTGAAGGAAATGCTTCGGGAAGTGACGGTAATCGttcagAGTCAGAAGCTGCGAATTCGTTGAATAATACGACATCAACGAATGGCAAAAAGAAGTCCGCTTATTCACTGGCACCAAATCGCGTGACGTGTCCGTATTGCAGCCGTAAATTTCCATGGAGCTCGTCTTTGCGTCGCCACATTTTAACTCACACCGGACAAAAACCATTCAAGTGCTCTCACTGTCCGTTATTGTTTACGACAAAGTCGAATTGTGATCGTCATTTGCTACGGAAACACGGAAATGTTGCCAACGCGTCGACCATAGTCACGGATCCGAATCCGATCATTCCGAATACAATCGAACCAACCGCTGCAAGTGTGCTGCCGCCTtctcaaaatttcatgatgcgCAACGTGCCCGAGAGACCGTTCAAATGTTCGACTTGTCCGAGCTCAACATTCTCGACTCTGAGCAATCTGAAGAAGCACATGTCCTGCAAGCATAACATAAACGACTCCCGACCGGGCACGCCGaaaaccgattttgaaaatcaacaaAATTCAGTGAATTCGAGGCCGCCGAGTCAATACAGCGGGGGTAATTATTCGGGCTACGAAAGCCACAGTTCTGAAGACGAACGCGGAGTGCAGATCATCGATTCAGAAATGCTGAAAGAAACGAACGTCGACGTTCAGAGATTCGTAAGTTACCAAAAGAATTCCGATTGGGAGCAACAAATCAACGctcaacaaataaaaagtagCGACCATCATTCGTCGAACGTGCAAAATAATTTAGATTTACCTTTCAAGTGCCATTTATGCGACGCGTCGTACGCCGAAAGACAGGATGCGCTCGatcacattaaaaataatcacgGAGACGAATACGAGCTGTTGTTGTCGAAGGGGGCTTTGGAGATAAACGCGAACTCTTATCAACACCAAATCGAACACGGCTCGGACAGCGCCAATCACAATAACGATAATTTGAGCGGTGGCGAGGACGACGTGCAGATTCGAGGAAAGTTTCCCGACTACGCGAACAGAAAGGTGATGTGCGCGTTCTGCATGCGCCGCTTTTGGTCGGCCGAGGACTTGAGACGTCACATGAGAACTCATTCGGGCGTCCGGCCTTTCTCGTGCGACATTTGCAGAAGGAAGTTTACGCTCAAACACAGCATGTTGCGACATCGAAAGAAGCACAACGTGTCCGAAAGTCAACGGTCGAACAGCGATCCGAACGCGTCGGCCAACGAGGACAACGTCAGTCCGACGAGCGGAGACGAGGATTGTCCGCGGGCGACGAAGGCCGACGATGTTTCGATGACGAAAAGCGACAACGACGTCGAAAGTTCAGCCGTCAATTTGACGCTCAAAAACGCTTCGGAAGACGAATCGGAAGGCACGGAAGGGACCGATCTGATCGGAAATCTCTTAGGGATAAGGGATAAGTCCATCATCGATCAGGTGTTGATTTCATCGGCAGACGATGCCGCCAAACTTTTGGGCGTCAATAGAAATAATCAGGAGTAG
Protein Sequence: MDTSSDDLKNGQEESSMNCNGVPENSNDNATSDRESPRSSDAGDLKYSCPMCGTELQTQHDVTLHLRSHNNSVENNGLNQQQCQSGDVCKSFVCRICSKVLSSNSSLDRHLLVHSGERPFRCKYCAVTFTTNGNMHRHMRTHCQTNYESDGSTDSNASAQSGNCNAKATRKRRYEYNNNKVSTLDSPDVNRKKYSETEEESCKKRKIDCSEISEDDSATNKRKIKNVNNNNELVPQKLQCPVCERKDFVSLNYFEKHIEETHPEYEIKCHSCNLGFKNYRVFHLHRFMVHQDERNVNSVKNVKNSIVGFKDLNFVDFTSEKFPIIAKSFCEKSFRRADNNDLKFECEKCGRAFPCHSALEIHQNDCLNFQNAYYKDEDLPTDYSSKLDKSDENMKREDFFAILDLQNKSIKPEPKAQSVSSTVPEMANELPRLKLKEYLSMKKPETLTGTSRPVDTTKDLADIQSILSVTSTGGLLQQLTAPKTVQEEQHVGHSDAMLKQSAANEATEEELQDAFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLSGSGNTGPYRCNMCPHSSVDKAALIRHLRGHNGDRPYECSLCNYAFTTKANCERHLRNRHAKVTREEVKKAIIYHPSEDPTNDEMTTKFYQSSIKLEDMSSSKSYGSREDIKRSLFPTSSLHRDKQTDIHKLSNSSQSSFTSNDDQNTQSIPVAVIPKSIASLTAPLQLKDTISAFNIPFVNDNLMAKSFTLPFTKDNLTALKEHRIAPKTPVIGSSGILNLSAENSHQDRIMNCSPIIVDDEPKSFQPLKQIPEYESSENEHSDSETEEKTTLDITDTPRSRHSQFRIVDQRKMLNTPPEHPIDLSMDVLDLSKKRSPTPQDIEEDDEEEENCSVQNNDEAQDFTKKALDYSTPPSSQNLNNALRNHLPPEAIFEKTQLLLAQQLLKSNAAPITPTANSFYANQLHQFYRHSPFPNVPAFPLNPYFLQPHPFLTPTASPQDLQEMKERIQKEIIRGLQLSGGSLVMDHMSLASERLQAFHQQALSNLKPDIKPEYKYNTSIKTEDVKTPIIPLQVETNQFSDMNSMKLKSPKNQIKSSTEIITPVTPNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNMSGVPGRKSTLPTMTPPQNNNQALKQNYFDQNAGLQNNDYALPKNSPNLILPNTNTKDELITNMAYLSKPLSITDQIRYSLLTQQLKQQSNELKTSVEQMETTTTVEKNYSKTIDDSENENDETEDALIIDEGSQSQSNDVQRESVRIAQFNSGENRDESRKSLEDKLLELRKIREKILLVEQNETVDLSQGQESFGDEKRTDRSDKLDDTANSFEEDAAVSTAVSDASKIQQNSISKITKPEDGGQDLVPVSRLLDNAASAQLPFREYFRREGEDHETPSEEDEDGFIASGSTSEGNASGSDGNRSESEAANSLNNTTSTNGKKKSAYSLAPNRVTCPYCSRKFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVANASTIVTDPNPIIPNTIEPTAASVLPPSQNFMMRNVPERPFKCSTCPSSTFSTLSNLKKHMSCKHNINDSRPGTPKTDFENQQNSVNSRPPSQYSGGNYSGYESHSSEDERGVQIIDSEMLKETNVDVQRFVSYQKNSDWEQQINAQQIKSSDHHSSNVQNNLDLPFKCHLCDASYAERQDALDHIKNNHGDEYELLLSKGALEINANSYQHQIEHGSDSANHNNDNLSGGEDDVQIRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHSGVRPFSCDICRRKFTLKHSMLRHRKKHNVSESQRSNSDPNASANEDNVSPTSGDEDCPRATKADDVSMTKSDNDVESSAVNLTLKNASEDESEGTEGTDLIGNLLGIRDKSIIDQVLISSADDAAKLLGVNRNNQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01511509;
90% Identity: iTF_01511509;
80% Identity: -