Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: L
Assembly: GCA_963575645.1
Location: OY754476.1:8992469-9015564[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 2.3e-05 0.00047 21.0 1.0 1 23 77 99 77 99 0.98

2 19 1.1 22 6.2 5.9 1 23 105 127 105 127 0.98

3 19 6.1e-06 0.00013 22.8 3.9 1 23 133 155 133 155 0.99

4 19 5.2e-05 0.0011 19.9 0.2 1 23 161 183 161 183 0.99

5 19 0.0083 0.17 12.9 0.5 2 23 209 231 208 231 0.96

6 19 0.24 4.9 8.3 0.5 1 23 340 363 340 363 0.91

7 19 3.3 68 4.7 0.8 2 19 373 390 373 395 0.88

8 19 1.6 34 5.7 0.3 3 23 457 477 456 477 0.98

9 19 0.01 0.21 12.6 1.1 2 23 512 533 511 533 0.95

10 19 0.00028 0.0057 17.6 1.9 1 23 541 564 541 564 0.94

11 19 0.2 4.2 8.5 0.3 1 23 569 592 569 592 0.92

12 19 0.0021 0.043 14.8 2.1 1 23 670 692 670 693 0.96

13 19 9.2 1.9e+02 3.3 0.4 3 23 763 785 761 786 0.87

14 19 0.033 0.68 11.0 4.4 2 23 799 820 798 820 0.96

15 19 0.29 6 8.1 0.5 1 23 830 852 830 852 0.97

16 19 2.4 49 5.2 0.1 1 23 994 1016 994 1016 0.94

17 19 0.12 2.4 9.3 0.8 1 23 1024 1046 1024 1046 0.96

18 19 0.12 2.5 9.3 0.2 1 23 1054 1076 1054 1076 0.97

19 19 0.00022 0.0045 17.9 1.6 2 23 1143 1164 1142 1164 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	2.3e-05	0.00047	21.0	1.0	1	23	77	99	77	99	0.98
2	19	1.1	22	6.2	5.9	1	23	105	127	105	127	0.98
3	19	6.1e-06	0.00013	22.8	3.9	1	23	133	155	133	155	0.99
4	19	5.2e-05	0.0011	19.9	0.2	1	23	161	183	161	183	0.99
5	19	0.0083	0.17	12.9	0.5	2	23	209	231	208	231	0.96
6	19	0.24	4.9	8.3	0.5	1	23	340	363	340	363	0.91
7	19	3.3	68	4.7	0.8	2	19	373	390	373	395	0.88
8	19	1.6	34	5.7	0.3	3	23	457	477	456	477	0.98
9	19	0.01	0.21	12.6	1.1	2	23	512	533	511	533	0.95
10	19	0.00028	0.0057	17.6	1.9	1	23	541	564	541	564	0.94
11	19	0.2	4.2	8.5	0.3	1	23	569	592	569	592	0.92
12	19	0.0021	0.043	14.8	2.1	1	23	670	692	670	693	0.96
13	19	9.2	1.9e+02	3.3	0.4	3	23	763	785	761	786	0.87
14	19	0.033	0.68	11.0	4.4	2	23	799	820	798	820	0.96
15	19	0.29	6	8.1	0.5	1	23	830	852	830	852	0.97
16	19	2.4	49	5.2	0.1	1	23	994	1016	994	1016	0.94
17	19	0.12	2.4	9.3	0.8	1	23	1024	1046	1024	1046	0.96
18	19	0.12	2.5	9.3	0.2	1	23	1054	1076	1054	1076	0.97
19	19	0.00022	0.0045	17.9	1.6	2	23	1143	1164	1142	1164	0.97

Sequence Information

Coding Sequence: atgttgtttagaGGCAACAGCAGCCGCCTTGAATTGTTAATCGAAAAAATACAagctaataaagaaaatcattcAGTTACTGTGCAAATTATAAAAGACGCACTGGGTACCGACGCCGAGGGAAGTAGTTCGCCGACGCCGTCATCGTCCTGCGCGACGCCAAATTCGGCGACAGAACTGGCAGATTCAGAGCTGACATTTACCCTCGGCGCTACGGAAGCCACGCCTTATGCTTGCCAGTTTTGTGATAAGGCATTTCCGCGACTCAGCTACCTGAAAAAGCATGAGCAGactCATAGTGACCAAATGCCGTTTCGTTGCGAATTTTGTTCGCGATTATTTAAACACAAACGATCGCGAGACCGGCATATTAAATTGCATACaggagataaaaaatataaatgttcgcATTGCGAGGCTGCATTTTCTAGAAGtgatcacttaaaaattcatttacgaacgcacgataatggaaaACCATTCCAGTGTACTGTTTGCAATCGCGGTTACAACACAGCGGCAGCCCTTACATCGCATATGCAAAGCCACAAAAAACAAACTCAACCATCTCAAGAAACCGTCTCCAGCGACCAAACAACGACTGTTAGTTCACATACCTCCCTTCGATGTTTGCAGTGTAGTGAAGTTTTCCAAAAGGCCGACGATTTACAGAATCACACGCAAACATCGCATCTAATAGAAGCGCCAAGTCCAAACAAACAATTAGCCGAAACAACAACACGGCCATCGGAACATTTACAACAATTCAATGTTAGATTAACGTctctaaatacaaaattaacatGCATGTACTGTACAAGAGATAGTTTTACAACAATGGAACAACTGCAGTTACATGTTCAAGCAATGCACCGGTCGATTTTAAATGGAGATTTACAAGATTCATCTTTGCAACAATCTTCGCCTCAATATCCGCCAAGATCGCCTGTTTATCCATCACTATTACTACGCTCCTCAACGCCCGCTCCTACGACACCTGCACAATCTCCTGCACCTTATATGTGTAGTCTTTGTACAATGCGATTCGCAAGCGCTCAAGCTCTTCATCTACATTCATTGAACGTTCATAGATTAACCAGTCCGGTTCCTCAAGCCGTCTGTCCATACTGTTCATTACCATTCCAAACAAACGAAATGTTCGTTGAGCATTGCACTAGGGTGCACGGTGTTACTGTTTCATTATCGCCCGGTCCGGAACAAGTACGACCGACCGATCTCAGCAAAAAAGGATGTTTCGTACTTTCGAGTGATGATAAGCCGTCGTCGAAACGTCTGAAGAGTGGTCATGTCGATTGCCAGACTCCAACGACGGCAACTAATCAATATGAACACGCCGGCACGTTGCTTTGCAATCAGTGCAACGCGGCGTTACCAGATTTTGAATCGTTCAGATCACATTTGAAGTTACATTTAGAACAGGGTGGTGGCCCAATACGTAGTTTTATTCACGGAGTTAATATGGATCCAAGAACTTTATTTGGAACGGACGCTTTTAGAAATATTGGAACTTTGACGTGCCCTCACTGTGGACAAACGCTCAAAGATATAATATCGTTAGAAAGACATGTTTGTGGACATTTTTTAACGCCCGTTACGGAATATGTTTGCCGCAGTTGCTCGAAGACATTCTGCACGCCTGATGATTTACAAAAACATCTGCTAGATATGCATGCTCACCATCTTTACAGATGTACACTTTGCAGAGAAATGTTTGACTCGAAAGTAGCTATACAGGTACATTTTGCGGTAAAACACAGCAGCGAGTGTCAAATGTTACGTTGTACCGTCTGTCCATCAACAACTAGATCTGTTTTTCGCACAGAAAGAGCTGGAAAAATGCACGTGAGATCGAGTCACGATACAAATTTACTTCTTCCGCCCATACCGACTTCCGCTAGTGGAAAATCAACTCGTTGTCATTTTTGTATGGAAGAATTTGATACAGAACTCGAAATGCAATTTCATATAACGACGCATTTTCAACCTTATAAATGTCTCATCTGTTCAAAACAATTTCAAGTTGAATATTTACTTGAAAAGCACATGCAAGAACATCATAACTTAAATCAGAATGCTAACGTGACTACAATTACTGAGAATGTGAGCGAACGCAACATAACATCAAAATCTTCGGCTGATATTCCCTTGAATCATACAGCACTTCAAAAAACATCTCCGACCATATCGCTTACTAAAGCCAGTTCAAAATCGAATTcagaaaataacaatattaaattagAAACTTCCAAAAACAGTAACACTAACTGCGACATCTGCGACAGAAACGATTTCGCAAACGAGACAGAATTGGTTGCACACAGAAAATTAGTACATCATGTGAAAGGCAGTTCAAAAAATGGTCCTGTTAGTTTACATTGCGCTTACTGTAGCGAAAATTGTAAATCAAGAACGGAACTAGAAAACCACATGAAAAGTCATTCTCAAAACAGCGGCGTTTCTGGGAAACACAAATGCAACATTTGCGACGAACTTTGTCCTTCGGCTGCTGTTCTGGCCGAACATAAATTGACTCACTGCAAAGTAATATCGGGGAATTGTTGTACGCACTGCAAGGCAACTCTAAACAGTGATGATGAGTTTTATGCTCATCTCGTTCAACACAGTAACAACAACAATGTCAATTCTAATCATTCGCAGAACAACATACAAGTTTCGTTGCCTGGCCCTTGCGTTATATGCAGACAAACATTGATATCCGATGTTGAAGTGAGAATGCACGCAAGATTTCACTTACGCCACACACCCTATTCGTCTGAATATCAATGCGTACTTTGTTTGAAGAACTTTGACAAATCGGAAGTGATCGCCGCCAATGGGACGATGTACATATGCCGACATTGTTTTAGTCAACACAATCCGACATCCGCGACGACACCCATACAGAAAATCGAACCGGaaattaaagtgaaaaaagAAGGAGATATGGGAAATGAAAAGTTCTCTTGCATAAAATGTCAACTGAGTTTCGGTAGCGAACCAGAAATCAGAGCGCACCTAAGCACTCATCTATCTTCTGAAGGAAATTCACACGAATGTCGACTGTGTAGAAGCGCATTCTCGTCATCTGTTAAACTGCAAATACATTTGATTGAACATACGTTTGTCGGATTTGGAAGTTTTACTTGTTATTTGTGTTCAGCGGTATTTACGGCAGCCCAAGGGCTGCATGTTCACATGTTGGAACACGGACTTGCAGCAAGACCTTATGATTGTCCAAGATGCagttcaaaattcttttttagaGCCGAATTAGACAACCACAGCTATGAGCACGTCGAACAAGACAACTTGTTTGGAAATGGAAAGACTGTAAACGGAGACTCTGAATACTGCAGCGGATCTGATTTAAAATCAAGTCCCGATAAAAACGATGCGTATCAAACACGATGTAAAGAATGTTTTAAAGAGTTCTCGTCGATTTCCAATTTGTTGACTCATTTGAAAATGCATTCTGAACAACACGATTCTAAAGACATGAGTGAAAATGAGAACGTGTTTAAAACTGAATTTGTTAAAGAAGAAGGAATGTCGTCTCAAGAAGACAGTGAATACATTGAAGTTAGCTCACCAGTCTACAGGCAAGAAGACATTATTAAAAAGATCACTTATGGTTCCGAATCTACTGTAGCGGATAATAATTGA
Protein Sequence: MLFRGNSSRLELLIEKIQANKENHSVTVQIIKDALGTDAEGSSSPTPSSSCATPNSATELADSELTFTLGATEATPYACQFCDKAFPRLSYLKKHEQTHSDQMPFRCEFCSRLFKHKRSRDRHIKLHTGDKKYKCSHCEAAFSRSDHLKIHLRTHDNGKPFQCTVCNRGYNTAAALTSHMQSHKKQTQPSQETVSSDQTTTVSSHTSLRCLQCSEVFQKADDLQNHTQTSHLIEAPSPNKQLAETTTRPSEHLQQFNVRLTSLNTKLTCMYCTRDSFTTMEQLQLHVQAMHRSILNGDLQDSSLQQSSPQYPPRSPVYPSLLLRSSTPAPTTPAQSPAPYMCSLCTMRFASAQALHLHSLNVHRLTSPVPQAVCPYCSLPFQTNEMFVEHCTRVHGVTVSLSPGPEQVRPTDLSKKGCFVLSSDDKPSSKRLKSGHVDCQTPTTATNQYEHAGTLLCNQCNAALPDFESFRSHLKLHLEQGGGPIRSFIHGVNMDPRTLFGTDAFRNIGTLTCPHCGQTLKDIISLERHVCGHFLTPVTEYVCRSCSKTFCTPDDLQKHLLDMHAHHLYRCTLCREMFDSKVAIQVHFAVKHSSECQMLRCTVCPSTTRSVFRTERAGKMHVRSSHDTNLLLPPIPTSASGKSTRCHFCMEEFDTELEMQFHITTHFQPYKCLICSKQFQVEYLLEKHMQEHHNLNQNANVTTITENVSERNITSKSSADIPLNHTALQKTSPTISLTKASSKSNSENNNIKLETSKNSNTNCDICDRNDFANETELVAHRKLVHHVKGSSKNGPVSLHCAYCSENCKSRTELENHMKSHSQNSGVSGKHKCNICDELCPSAAVLAEHKLTHCKVISGNCCTHCKATLNSDDEFYAHLVQHSNNNNVNSNHSQNNIQVSLPGPCVICRQTLISDVEVRMHARFHLRHTPYSSEYQCVLCLKNFDKSEVIAANGTMYICRHCFSQHNPTSATTPIQKIEPEIKVKKEGDMGNEKFSCIKCQLSFGSEPEIRAHLSTHLSSEGNSHECRLCRSAFSSSVKLQIHLIEHTFVGFGSFTCYLCSAVFTAAQGLHVHMLEHGLAARPYDCPRCSSKFFFRAELDNHSYEHVEQDNLFGNGKTVNGDSEYCSGSDLKSSPDKNDAYQTRCKECFKEFSSISNLLTHLKMHSEQHDSKDMSENENVFKTEFVKEEGMSSQEDSEYIEVSSPVYRQEDIIKKITYGSESTVADNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01511569;
90% Identity: iTF_01511569;
80% Identity: -