Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754464.1:27602442-27605744[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.7 55 5.0 0.3 3 23 247 268 245 268 0.93

2 18 0.22 4.6 8.4 1.7 1 23 273 296 273 296 0.95

3 18 0.013 0.27 12.3 1.7 1 21 413 433 413 434 0.95

4 18 1.9 39 5.5 1.6 2 23 567 589 566 589 0.94

5 18 4.8 99 4.2 5.3 3 23 656 677 654 677 0.94

6 18 0.00062 0.013 16.5 1.6 3 23 684 704 683 704 0.97

7 18 0.11 2.3 9.3 0.0 2 21 710 729 709 730 0.91

8 18 0.0079 0.16 13.0 4.5 1 23 736 758 736 758 0.93

9 18 0.078 1.6 9.8 0.9 1 23 768 791 768 791 0.97

10 18 0.23 4.8 8.4 0.2 1 23 807 829 807 829 0.93

11 18 0.0044 0.089 13.8 0.5 2 23 834 856 833 856 0.94

12 18 2e-05 0.0004 21.2 1.3 1 23 861 883 861 883 0.97

13 18 0.0027 0.056 14.4 5.0 1 23 888 910 888 910 0.98

14 18 0.0056 0.12 13.5 1.2 1 23 958 980 958 980 0.98

15 18 0.00097 0.02 15.8 4.6 1 23 986 1008 986 1008 0.96

16 18 0.00012 0.0026 18.7 8.7 1 23 1014 1036 1014 1036 0.96

17 18 5.8e-05 0.0012 19.7 3.6 1 23 1042 1064 1042 1064 0.98

18 18 0.0073 0.15 13.1 9.6 1 23 1069 1091 1069 1091 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.7	55	5.0	0.3	3	23	247	268	245	268	0.93
2	18	0.22	4.6	8.4	1.7	1	23	273	296	273	296	0.95
3	18	0.013	0.27	12.3	1.7	1	21	413	433	413	434	0.95
4	18	1.9	39	5.5	1.6	2	23	567	589	566	589	0.94
5	18	4.8	99	4.2	5.3	3	23	656	677	654	677	0.94
6	18	0.00062	0.013	16.5	1.6	3	23	684	704	683	704	0.97
7	18	0.11	2.3	9.3	0.0	2	21	710	729	709	730	0.91
8	18	0.0079	0.16	13.0	4.5	1	23	736	758	736	758	0.93
9	18	0.078	1.6	9.8	0.9	1	23	768	791	768	791	0.97
10	18	0.23	4.8	8.4	0.2	1	23	807	829	807	829	0.93
11	18	0.0044	0.089	13.8	0.5	2	23	834	856	833	856	0.94
12	18	2e-05	0.0004	21.2	1.3	1	23	861	883	861	883	0.97
13	18	0.0027	0.056	14.4	5.0	1	23	888	910	888	910	0.98
14	18	0.0056	0.12	13.5	1.2	1	23	958	980	958	980	0.98
15	18	0.00097	0.02	15.8	4.6	1	23	986	1008	986	1008	0.96
16	18	0.00012	0.0026	18.7	8.7	1	23	1014	1036	1014	1036	0.96
17	18	5.8e-05	0.0012	19.7	3.6	1	23	1042	1064	1042	1064	0.98
18	18	0.0073	0.15	13.1	9.6	1	23	1069	1091	1069	1091	0.98

Sequence Information

Coding Sequence: ATGCCAATGAATATTTGCGAAACTTGTCGAGATCATTTgaatcaaatatatttattcaagaaGCAATGCGAAAAAGCCGATTTTATTCTGCGTATGCAAATCGAGAAAGATGTTAAAACGGATCCATTGGAATTGTCTGTTGTAACAGACAATGTGATAAGGTCGCAGTGCGCTGCTAAAAACGTGTTACGTGATGTTGAAAATAGTGAAGCAAATTTCTCTGATGATTTTGAAGACACGGGCattcaacaaattaaaaatattaacacttaCGTGAGACAGAAGATGACAGTCGActcgataaaaaataaactcgaTTTAAAGAGGAGCAAAGTCACGGCATTTTCAAACGATTGTAAAAATGATTATACCGATTTGGCGTCGGATTTATTTACTAATAAAGTACCTTTAACACGTTTGGATAATGTAACAGTGACGAACGTGCATTCTTTGCACAAGCAAAGTAGTTCTATTTTAGTCAATTGCagaatgtgtaaaaaaaattatatctcgGGAAGTTTTTCACAACATTGGGCTGAAAATCATGAAAGTAGTGGCGTCAaaaatactcaaactaatttaGTTATCGCGAAATCGTCAAGGAAGGAAAATTTACCTTTATCTAGTAACAACCAGTTACCTTCCAGTGTTGAAAACGGCGACAGCAAtgtgtttatagaaaaaataaatgacgaTCTAAAAACAAACGATTATATTCAAACAAGTGAAGGGgttatttgtttgaaatgtAACAAATTCTTAGGATCATATAATGCATTTGAGAAACATTTGTTTGTTGACCATGCTCACATTAAACATAATTGCAGCGAGTGCAGCATGAATTTTATATTTCGAGAAGCGTTTCTTCAGCACAGAAGGGAAGTGCATAACGAAGAGATGAACGAAAAGGAACAAAACTTCACCTCTGAATCACCACCGACCGAAGTTGATACAAAACCATTTCAGAACAGGGAAACAATtaaacaagaaagttatgaagcTGAAAGTAACGAAAGTTTTAGGTTATCAAATGATTCTAATAATGATGAAACAAAAGATATACATATATCAGATTATAATCAAAAACCGGATGATATCCAAGAAATAAATTATGCAAAAGAAGTAAAAACTGTAACCCCAACAAAAAATTGGATTAAGTGTCTTAAATGTAAACAGTTGTCGCGTTCGGTTGGTGCATTTAAAATACACCTATTTATCACACATAatgaaatgacatttaaatgtgACAAATGCGCCAGAGgttttgtatttaataaatcTCTTCGTCGACATAAAAAATCGGGGATGTGCAAGGGGACAGTAAAAGAACAAACGACAGTTAAGGTTCCCGAATGTACAGTAAACAATCGGAATGAAGAAGATCAAGGGACAGTAAAGATTCTGGAATGTACTGCGGACGATCGAGACGAAAAAGAACTAAACACTGATGTAGATCCATTGTTAATTGAAGTAGATACCGTTGATGAAAAACCGTTACAAAATGAAGAAATGGATTTTCTAGGTAATGACAATACGTCATCTGATATCACTGGAACTAATGAAGTAACAAATGGAAGTGACGAAATGACAAATGAAAGTATCAAAGTAACAAATGAAAGTATTGAAGTAACAAATGAAAGTAATAAAGAAACAAAGGATGTTAAGACATTCGAAAATATTGAGACACACACATCGATAACTTGTTCCCAATGCAACGAATTATTACATTCAAAAAGTGAATatgaaaaacatttatatatcaAGCATGGTACACGCTTATATAAATGCAAAGAATGTAATCTAGATTTCTTATCTACAGTATCTTCTCTTCAGCACATGCATGAGAAACATGGGGAACTGAGAGCAAAACACTATGAATTATACTTAAATATGCTAagcgaaaaaaagaaaatatgtgATAAATGCGGAATAGAATACGTGCATAAACATTCAAATTGTATTTGTTGTAAAAACTGCAATatgtattttaagaaaaaagagATTCTTTGTAGACATTTAATAAAGGTTCATAAAGAGAAAATAAATCCGTGTGGCACATGTGGAAGAAGTTTTTCGAATATTCATAGGCTTAACAAGCACTTAAAGGTTCATAAGAAACGCGAAATAGTATGCAAAGTGTGCGGACAAACGTTCGCAGGCACAGCAGAGTTGGatcaacatttaattaaaacaaatgaaagagcgtataaatgtaaaatttgcGATAAGGGATTCAATACTCTCAGAAGTCTTTCGACGCACTGTAAGAATCATTATGAAAGTAAAACTGACCATGTGAAATTCGTTTGCGAGTTTTGTGGAGAACAGTACATTTGCAAAAAGGCTCTCAAAAATCATATAGCAACTCTGCACTtcggtgaaaacaataacattACATACGACGAAAGCATCAACTTGTATAtgtgtaatatttgtaaaagAGGATTTGCAACCGAAATTATTGCAAAAGTACATTTACGGCGCCACACGCTTCTTAATAAATGCAAAGAATGCGGAGAAAAGTTCGGTACTCGTCAGGATTTGTTGAGCCATGAAATCTCTCAGCACGATAGAAAGTTCTACAAATGTGATAAATGTGATAGGCGTTTTAGGCGTCTCGGAGATCTAACTAAACATGCACTCAATCACGATGGAAAAACACACAAATGCAATATATGTAAGCATACATTTTCGAGTATCGAATCTCTAGGGAACCACAGGAGAACGCACGAGAACGTCAAACAACACCGATGTCATTTCTGCCAGAGAAGATTCCTGGTTGGCGCTAATCTTTCGACGCACATACAGAAATGCCATGTGTCAGAAAACGTCACCGGTACAAAACGAAGTAGATGTTTTATAAAGGAACAATATGAGTGTCAAGCGTGTAATAAGCAATTCAAATATAAGACACCGTGGACCATTCATATGAACAGACACGCAGATATAAAACCGTACGAGTGCCAAATTTGCCATAAAAGATTTGCATCTCAGACCCACTTGAATTTGCATGATCGAACGCATACAGGGATTAAACCATATAAATGCGATCATTGCGACAAAACATTTACTCAGCACTCCCATCTTCGGACACACAAGGAACTCCATTCCGGCGTGAAACGACACGTTTGCAAATATTGCAAGAAAAGATTTACTCTTCAACAGTATTTGAGAGCTCACATCAGAATTCACACGGGAGAAACGTTCCAGTGTCCCTTTTGCGAACGAACATTTCATCACTGCAGCAACTTGAGAAAACATAAATTGTCTCATAAAAACTCATTGAAGAATGTTATAGACTGA
Protein Sequence: MPMNICETCRDHLNQIYLFKKQCEKADFILRMQIEKDVKTDPLELSVVTDNVIRSQCAAKNVLRDVENSEANFSDDFEDTGIQQIKNINTYVRQKMTVDSIKNKLDLKRSKVTAFSNDCKNDYTDLASDLFTNKVPLTRLDNVTVTNVHSLHKQSSSILVNCRMCKKNYISGSFSQHWAENHESSGVKNTQTNLVIAKSSRKENLPLSSNNQLPSSVENGDSNVFIEKINDDLKTNDYIQTSEGVICLKCNKFLGSYNAFEKHLFVDHAHIKHNCSECSMNFIFREAFLQHRREVHNEEMNEKEQNFTSESPPTEVDTKPFQNRETIKQESYEAESNESFRLSNDSNNDETKDIHISDYNQKPDDIQEINYAKEVKTVTPTKNWIKCLKCKQLSRSVGAFKIHLFITHNEMTFKCDKCARGFVFNKSLRRHKKSGMCKGTVKEQTTVKVPECTVNNRNEEDQGTVKILECTADDRDEKELNTDVDPLLIEVDTVDEKPLQNEEMDFLGNDNTSSDITGTNEVTNGSDEMTNESIKVTNESIEVTNESNKETKDVKTFENIETHTSITCSQCNELLHSKSEYEKHLYIKHGTRLYKCKECNLDFLSTVSSLQHMHEKHGELRAKHYELYLNMLSEKKKICDKCGIEYVHKHSNCICCKNCNMYFKKKEILCRHLIKVHKEKINPCGTCGRSFSNIHRLNKHLKVHKKREIVCKVCGQTFAGTAELDQHLIKTNERAYKCKICDKGFNTLRSLSTHCKNHYESKTDHVKFVCEFCGEQYICKKALKNHIATLHFGENNNITYDESINLYMCNICKRGFATEIIAKVHLRRHTLLNKCKECGEKFGTRQDLLSHEISQHDRKFYKCDKCDRRFRRLGDLTKHALNHDGKTHKCNICKHTFSSIESLGNHRRTHENVKQHRCHFCQRRFLVGANLSTHIQKCHVSENVTGTKRSRCFIKEQYECQACNKQFKYKTPWTIHMNRHADIKPYECQICHKRFASQTHLNLHDRTHTGIKPYKCDHCDKTFTQHSHLRTHKELHSGVKRHVCKYCKKRFTLQQYLRAHIRIHTGETFQCPFCERTFHHCSNLRKHKLSHKNSLKNVID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -