Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754472.1:6760145-6771097[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 10 2e+02 3.2 1.4 2 12 361 371 360 383 0.84

2 17 0.086 1.8 9.7 1.1 1 23 391 414 391 414 0.93

3 17 0.16 3.3 8.9 2.1 1 20 423 442 423 444 0.94

4 17 8.9 1.8e+02 3.4 0.2 2 16 455 469 454 476 0.80

5 17 0.015 0.31 12.1 0.4 3 23 485 506 483 506 0.96

6 17 0.068 1.4 10.0 0.8 3 21 516 534 514 535 0.92

7 17 0.011 0.23 12.5 1.8 1 23 542 564 542 564 0.94

8 17 0.00016 0.0033 18.3 1.3 1 23 570 592 570 592 0.99

9 17 0.00043 0.0088 17.0 3.3 1 23 644 667 644 667 0.94

10 17 0.15 3.1 8.9 3.2 1 23 720 743 720 743 0.94

11 17 0.27 5.5 8.2 1.2 1 23 750 773 750 773 0.98

12 17 1.1 23 6.2 0.3 2 23 781 805 780 805 0.93

13 17 9e-05 0.0018 19.1 0.2 1 23 815 837 815 837 0.97

14 17 3.5e-05 0.00071 20.4 2.3 1 23 843 866 843 866 0.96

15 17 0.00019 0.0038 18.1 0.9 1 23 904 926 904 926 0.96

16 17 4e-05 0.00082 20.2 0.1 1 23 932 954 932 954 0.97

17 17 0.00011 0.0023 18.8 2.1 1 23 960 983 960 983 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	10	2e+02	3.2	1.4	2	12	361	371	360	383	0.84
2	17	0.086	1.8	9.7	1.1	1	23	391	414	391	414	0.93
3	17	0.16	3.3	8.9	2.1	1	20	423	442	423	444	0.94
4	17	8.9	1.8e+02	3.4	0.2	2	16	455	469	454	476	0.80
5	17	0.015	0.31	12.1	0.4	3	23	485	506	483	506	0.96
6	17	0.068	1.4	10.0	0.8	3	21	516	534	514	535	0.92
7	17	0.011	0.23	12.5	1.8	1	23	542	564	542	564	0.94
8	17	0.00016	0.0033	18.3	1.3	1	23	570	592	570	592	0.99
9	17	0.00043	0.0088	17.0	3.3	1	23	644	667	644	667	0.94
10	17	0.15	3.1	8.9	3.2	1	23	720	743	720	743	0.94
11	17	0.27	5.5	8.2	1.2	1	23	750	773	750	773	0.98
12	17	1.1	23	6.2	0.3	2	23	781	805	780	805	0.93
13	17	9e-05	0.0018	19.1	0.2	1	23	815	837	815	837	0.97
14	17	3.5e-05	0.00071	20.4	2.3	1	23	843	866	843	866	0.96
15	17	0.00019	0.0038	18.1	0.9	1	23	904	926	904	926	0.96
16	17	4e-05	0.00082	20.2	0.1	1	23	932	954	932	954	0.97
17	17	0.00011	0.0023	18.8	2.1	1	23	960	983	960	983	0.95

Sequence Information

Coding Sequence: ATGTCTCATTCAGAGCTTAATAGTATGAAAAAAACTGTCGAGAATAATACTAATGGTAATTCATCTTTTAATTCGAACGGCAATATAACTGCTGGTGAACTTACAAATgcaaataaaagtaattttactGATGATGACGACAGTCTGTCTTTGGAAGCATTATTAGAAGCACCTGAAAAAGTGTATTTCAAAAATCAAGCAGATGATAATGTTCCTGGTATTGAAATGCAGGTATCTGACAACAGTCGTAACATAGCAGAAGATTTGACCGAGAAAGTGGAAACAAGCCACCCAGATAAATTGACAGATAATGGGAGTCTTCCTGTTAATTTTAAATCAGAAAATGAAGCCTCCGATGAAAATCAAACaacagaaatttcaaaaaattctgacGACACCCAttcgattaatttaaaaagtccTCGTGAAAGCCAAACTATTACTTTGGATTTCAACAGTTTAGATTCAAACAAACTTTCAGACGATTCGGTTATTGAAAATCGAAATACAGTTTTTAAtgcgaaaataaatttttcatctaCGTTAGAAAACGTGCGAAAAAATTTCTATTCCCGAAGAAAATCAGAAGACGACGTTTCGATTATTTTCGAGTCACAACAACAGAAACCAGTTCGACGAAAGCGAGGTAGACCTCGAAAGAATCCTTTACCCGTGACGGAACAATCGAAAACTGTCGATGATGCTGTCGAAAGTATAGAATCGATCGAGAATTTCATTAAGGCCACCGATAGACAAAATATCGATAATAAAGTAGATTTGAATCTCGATTTACACGACTCTGAAACGCTTATAAGTGAACAGCTGTCGACTCGAATGTCAGTATGTAGACTTTGCGCTCAAAGTTATCAGCCGGGATGTATTATGTTTATGTACGATGATAAACACAAAGAGATAGATTTAGAATGGAAGATAAACTCTTGTCTACCTATTAAAGTAGAAAAGAATGATGGATTGCCGCACTGGAATACGTTAATAGACGGACGTTTAGTAGGCGTAGATGAATTCATCAAAGAAAGTTGCGATCAAAATAACACGATTGTTGAACAGACGGCACCAGTTGAGTGCAGacattgcaataaaaaatttgaaaacgtcTTATGTACGACTGATCACTCAATCGAAGAACACAGCAACGCGATTGAGGGTTTATTTCCCTGCTGCCTTTGTGAATACGGTTTCAACAGCAccgaaaaattacaaaaacatgttTTGGGATTACATTTCACTGGGATACAAACGAAATTTTATCAGTGCACAAATTGCGATTCAAAATTCGCCACGGAACTTTTGTTGCAGCGCCATTTTTGTtcgttacaaaataatactcgaGTTCAAGATCTGAGCTGTaaaatttgtaatataatattccCATCGAAGATAAGACTGGCTTTCCATTCCCAGTTCCATTTCAACGGAGCAGTTCCGTTGTTTTGTACCGACTGCGAGATCGCGTTCAAAGACGAAGGTGAATTTTTcgatcacaaaaaaactatgcaCGATTGTAAAGctaataaagatatattttgcGATCATTGTAATAAAATCTTCCCGAGTTTGAAGTCTTACAAAATGCacgaaaaattgaataaaaatataaggaATTATAGATGTAGTAAATGTGACAAGACTTTTTTGGATAAGCAAACGTTGAAAGAACATTCCGTCATGCATTTGAATGTGAAACCGTTTCAGTGTCGTATTTGCGGGAAATACTTGAACCGTGCCAGTCGACTGAAGAGACATCTGTTGACGCATGAAAGCGATAAAACTCAGCCGACCGACGTTAAAGTTTGCGGTCTGTGCGCAGAAGCATTTTCGAACGAGGACGTCGCTCTTAAGCACGACATATCGAATCACATAGAAATCGAGCGTAGTAATTGTATCGAGGATGTACATATCGATAAAGTGTACAGATGCGAATACTGTGAAAGATGCTTCTATACCAAAGACGGATTGAATAATCATCGAAGTGAATTACATACGTTAAACGAAGAAAGTAATCCTTACAAGTGTCACATTTGCTTTGCACAGTTCCCGACTTATGCTAGATGTACCACACATAAAACAACACATGGCTATTTCAAAAATGGCGACGGAACTGAAGTGTCCAAAGATTCGTTTCCTGTTCCCAAACATTTCCTTTGCGAACATTGTGGAAAATCTTATTTACATTGGACATACTTAGGTGTTCACAGGCGCTTGAAACATTCAAAGACAGTTTATATGTATAAATGTTCTGAATGTCCACAGCAGTGCCCCACATCCTGGGGAATTGCGTATCACAGGAAAACGAGACATCCGTATTTGATGTCAGAACTTACGTGCAAAGAATGCAATCCTCCAGAACGGTTTCAGAATCGGCAATTATTAATGGAACACATGGAACAAAAACATGCCCAATCTAAAGCAGGTAATCAGTCATACCAATGTGAGATCTGCGGTAAAACTTACATCAAACCCGAATCATTGGAAATGCATAAACAGGATCATACGGGAAGCACTGACCACATTTGTTCCACTTGCGGTAAATCGTTTGTACATTCTGTCGGCTTACAGAATCATATGCAGTCTATGCACAGTGTAAACCGTTCAGAATGGAAACACGAATGTCCATTTTGTGatagaaaatttaattgttCAGTAGATGAGTTTGAAACACATCTGAAAAAACACTCGGGACAGAAACCGTATGAATGCATCCAATGTGGAAAAACATTTAGAATCAAAAGTCTACTTACAATACATACTAGGACCCATACCGATGAACGACCGTTTCCATGCGATATTTGTGGATTGGGTTTTAGAAGATCGTATGCATTAAAAGTTCACAAAATGATACACGACGACGTTAAACCTTTTCAGTGTTCgatttgtcgaaaaaaattccGCCAAAGACCTGAATTGCAAAAGCACACTAATGCTAAACATTCAGGTCGTTTTGTTTTGATGGTAGATTCGAGCGGCCCCGAAGAGAAACAAAATGAGTCGGAGATACTCGAAAACAATTCTGAATTTGTTGATGATCCAATTAgcgtaaatttaaataaaaatgagaaaacgTTAGacgttaatgaaaaaaatgacaGCGTCATAATTTCAAATAGTTTATTCGATCAGAATTTTGTTTTTCGAGATAAAAGTGCTTCCCTGCAGTTTAACAGCGATAGTGGTTTACAGTTTATCGATCAGAAAGAAACTGAAGATGAACCGATTATAATTACTGAACAAAGTTCTGAcggtaatattattattctaaatCAGAACGTCAAAGAAGAATATCAGAATAATACGTGTATCAAAAATGAAACTATCGGTAGCAATGTGATCGATGATGTAAACGGACAATACAATAGATTAGTTTTGAGCGACGGTACCGAAATGATTATCGATAATGgcaattataatgaaaataatttaatttttatcaataatgaAAGTCAAGAACCGAATTATATTGTCACTGTTAACGAAGAAGACAttggagaaaaatattttttacaaattaaagaCGATAAGCAGATACTGATAGAAAATAACAGTCAACaatatattgttaataaaagtgAACTCGGCTTATCCTAG
Protein Sequence: MSHSELNSMKKTVENNTNGNSSFNSNGNITAGELTNANKSNFTDDDDSLSLEALLEAPEKVYFKNQADDNVPGIEMQVSDNSRNIAEDLTEKVETSHPDKLTDNGSLPVNFKSENEASDENQTTEISKNSDDTHSINLKSPRESQTITLDFNSLDSNKLSDDSVIENRNTVFNAKINFSSTLENVRKNFYSRRKSEDDVSIIFESQQQKPVRRKRGRPRKNPLPVTEQSKTVDDAVESIESIENFIKATDRQNIDNKVDLNLDLHDSETLISEQLSTRMSVCRLCAQSYQPGCIMFMYDDKHKEIDLEWKINSCLPIKVEKNDGLPHWNTLIDGRLVGVDEFIKESCDQNNTIVEQTAPVECRHCNKKFENVLCTTDHSIEEHSNAIEGLFPCCLCEYGFNSTEKLQKHVLGLHFTGIQTKFYQCTNCDSKFATELLLQRHFCSLQNNTRVQDLSCKICNIIFPSKIRLAFHSQFHFNGAVPLFCTDCEIAFKDEGEFFDHKKTMHDCKANKDIFCDHCNKIFPSLKSYKMHEKLNKNIRNYRCSKCDKTFLDKQTLKEHSVMHLNVKPFQCRICGKYLNRASRLKRHLLTHESDKTQPTDVKVCGLCAEAFSNEDVALKHDISNHIEIERSNCIEDVHIDKVYRCEYCERCFYTKDGLNNHRSELHTLNEESNPYKCHICFAQFPTYARCTTHKTTHGYFKNGDGTEVSKDSFPVPKHFLCEHCGKSYLHWTYLGVHRRLKHSKTVYMYKCSECPQQCPTSWGIAYHRKTRHPYLMSELTCKECNPPERFQNRQLLMEHMEQKHAQSKAGNQSYQCEICGKTYIKPESLEMHKQDHTGSTDHICSTCGKSFVHSVGLQNHMQSMHSVNRSEWKHECPFCDRKFNCSVDEFETHLKKHSGQKPYECIQCGKTFRIKSLLTIHTRTHTDERPFPCDICGLGFRRSYALKVHKMIHDDVKPFQCSICRKKFRQRPELQKHTNAKHSGRFVLMVDSSGPEEKQNESEILENNSEFVDDPISVNLNKNEKTLDVNEKNDSVIISNSLFDQNFVFRDKSASLQFNSDSGLQFIDQKETEDEPIIITEQSSDGNIIILNQNVKEEYQNNTCIKNETIGSNVIDDVNGQYNRLVLSDGTEMIIDNGNYNENNLIFINNESQEPNYIVTVNEEDIGEKYFLQIKDDKQILIENNSQQYIVNKSELGLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -