Xxan021418.1
Basic Information
- Insect
- Xanthostigma xanthostigma
- Gene Symbol
- ZNF711
- Assembly
- GCA_963575645.1
- Location
- OY754474.1:16141933-16147529[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.00054 0.011 16.7 0.9 1 23 235 257 235 257 0.99 2 17 0.0091 0.19 12.8 0.5 2 23 263 284 262 284 0.95 3 17 3.8e-05 0.00077 20.3 1.4 1 23 287 309 287 309 0.97 4 17 2.7e-05 0.00056 20.7 2.1 1 23 315 338 315 338 0.96 5 17 0.012 0.25 12.4 5.7 1 23 348 371 348 371 0.94 6 17 1.7 34 5.7 0.1 3 23 380 398 379 398 0.85 7 17 0.0086 0.18 12.9 3.2 1 23 404 426 404 426 0.98 8 17 1.3e-05 0.00027 21.7 0.3 3 23 437 457 436 457 0.99 9 17 1.9e-05 0.00038 21.2 0.4 1 23 463 485 463 485 0.98 10 17 0.018 0.37 11.9 1.3 1 23 595 617 595 617 0.97 11 17 0.0007 0.014 16.3 1.4 1 23 623 646 623 646 0.96 12 17 4.5 93 4.3 0.1 2 11 654 663 654 672 0.87 13 17 0.13 2.7 9.1 0.9 1 23 678 700 678 700 0.98 14 17 0.004 0.081 13.9 1.9 3 23 710 730 709 730 0.97 15 17 2e-05 0.00041 21.1 1.4 1 23 736 758 736 758 0.97 16 17 2.2e-05 0.00046 21.0 1.3 1 23 764 786 764 786 0.98 17 17 2.5e-06 5.2e-05 24.0 0.6 1 23 792 814 792 814 0.98
Sequence Information
- Coding Sequence
- atgactgaagacgtaagaaaatcaaattttaaaaaactgtgcCGAATCTGCCTATTGCAAAGTACACAAAATCAATCGGTTACAAATGATATTATTGAAAAACTAGAAATATGCACTTCCGTTAAGATATTATTAGATGACGGCCTTCCTTCTAAAATGTGCGTAAGTTGTAAACAAAACACTGAAAAATTTTAcgagtttaaattaaaatgtaaagcATCCGacaaacttttaaaaagtattttaaacggATCAGAAGACCAAAAGTCTAGATGCGAAGAGCCGgacataaaatatttgattCCGTTCGTGAGTATAAACGATCAGtcgataaaaaaagaaaacgataTCGTAAATAATTCCGAACTCGATGGCGACGACGAATTAAAAACTAGTAATTCATCGAAAAGCCTACCGCTAAATGATACTTGCGCCAACAGTATATTAGCCGATATTAAAACAGAAACAAACAAAGCcgatgaaaattttataaaaaacgaaAATGACAGCGATACATCGACCGTATCGATTGGCGCGCAAGCAGAGATAAAACAAGAAGAGActagtcatttaaaaaacgaaGCCAACAATGCACAAGAGCTGGAAGAATCGTATCCTTGccaagtttttaataaaattttacgtaGCGAATACTCGCTGTTACGACCCACGCAAACGGAAGGCCACGGCGGCGACAAGGAGTATACGTGCGACCTGTGCAaagaaagttttaataaaatcaggGGATTGTCCGAACATATGAAAACGCACGGCGTCAAGCCGTTGGTTTGTCCCGTTTGCAAGAAACAATTCATGTTAAAAGTCCAGCTGGAAATTCACCGAAAATTCCACGATAAATTCGCGTGTCGACAGTGCAGCAAGGTGTTCAAAAACGCTAACAATTTGAACCGACACCGAGTGACGCATTCGAACGAAACGCCGTTCCGATGTTCGCAGTGCGATAAAAGTTTCAAGAGCGAAAGTTACCTCTCGAATCACACCAAATTGGTGCATTACGGTATTAAGAAACAGGACGGGATTTTTCCGTGTTCGAAATGCGACAAATGGTTCAAGCACAAGTACAGCTTGAAGAaacattttatgaattttcacgaagGCACGAGGAAAAAAGAAGTGTGCAACCAGTGTGGCAAAATGGTTGCCGGTTTAAAGCGTCATATAATGATCATTCACAGTACCGACAGACCCCACAAATGTCAACAATGCGCTATGACGTTcacatttgttaattatttacaaaaccaCATGAAAATTCACACCGGAGAAACTAAAAGGTACACGGAGCTGTGCAACATTTgtggaaaaaagtttcaaactgCCTGGGATCTAAAAATTCATATTCGTTCTCACACAGgtGAAAAACCTTATTCATGTTCAGTTTGCAATAAAGCCTATAAGACTCAGTCGGCATTAGCCGTTCACAAACGACTGCATACGGGCCAACGGCCCTTTTCGTGTCACTTTTGCGAAGATCAAAAACCGAGCTGCGACGAACtggatataaaatatttgattcCGCTCGTGACTATAAGCGACCagtcaacaaaaaaagaaaacgaatCATCAAACGTGAATAGTTACGGCACAATCGTAAAAGCCGAAGATGAATCGAGCAATTCGAATGAGTTACTGTTGAGCGAAAGTGACTCGGAACAGAACCAACCGAAACTAAAAGACATAATAAACGACAATAGTGAAACAAAACCGtgcaataaaacaaacaatGCCGATACAAAACCCGACGCGAACAGCAAGTATAGATTCGTTTGTCGTGTTTGCGGTAAAGGCTACAATATGAGAAAACGATTGCAGGCGCACGAGTGTATACACTTAAATTTGCGACCGTTCAACTGTTTAAAGTGCGATAAGAACTTCAGAGGAGAATCACACTTGAGCAGTCACATTGCTAGAGTTCATAATCCGGACAGAAAAAAACCTAAATGTAACGTTTGTGGGAAATCTGTTGTACATATTGGattgCACATGGCTCGCCACAGCACAGAACGGCCCTACAAATGCGACTTTTGTGCCCTATCGTTCCCCGTAAAATGGGACTGTATCAAACATATGCAAATCCATACGGGTGAAAGAAAGTTTACGACTTTGTGCAGCGCTTGCGGCAAACAGTGTCAGTCGCCGAAGGATCTACGAATACATATGCGAAAACACACGGgGGAGAGGCCACACAGTTGTGACACCTGCGGAAAAACATACAAAACAGCATCGGCTCTTGTCGTTCATAAACGTTCACATACCGGAGAGCGTCCGCACAGATGTGATATGTGCGATAAGGCTTTCtatacaaaagaagtgttgaAAGCTCATTTGCGCATTCATACAGGAGAGCGACCGTTCGTTTGTAAAATTTGTCAAAGAGCTTTCTCACAAAATCAAGCTCTCAACACTcatatgaaaatacattaa
- Protein Sequence
- MTEDVRKSNFKKLCRICLLQSTQNQSVTNDIIEKLEICTSVKILLDDGLPSKMCVSCKQNTEKFYEFKLKCKASDKLLKSILNGSEDQKSRCEEPDIKYLIPFVSINDQSIKKENDIVNNSELDGDDELKTSNSSKSLPLNDTCANSILADIKTETNKADENFIKNENDSDTSTVSIGAQAEIKQEETSHLKNEANNAQELEESYPCQVFNKILRSEYSLLRPTQTEGHGGDKEYTCDLCKESFNKIRGLSEHMKTHGVKPLVCPVCKKQFMLKVQLEIHRKFHDKFACRQCSKVFKNANNLNRHRVTHSNETPFRCSQCDKSFKSESYLSNHTKLVHYGIKKQDGIFPCSKCDKWFKHKYSLKKHFMNFHEGTRKKEVCNQCGKMVAGLKRHIMIIHSTDRPHKCQQCAMTFTFVNYLQNHMKIHTGETKRYTELCNICGKKFQTAWDLKIHIRSHTGEKPYSCSVCNKAYKTQSALAVHKRLHTGQRPFSCHFCEDQKPSCDELDIKYLIPLVTISDQSTKKENESSNVNSYGTIVKAEDESSNSNELLLSESDSEQNQPKLKDIINDNSETKPCNKTNNADTKPDANSKYRFVCRVCGKGYNMRKRLQAHECIHLNLRPFNCLKCDKNFRGESHLSSHIARVHNPDRKKPKCNVCGKSVVHIGLHMARHSTERPYKCDFCALSFPVKWDCIKHMQIHTGERKFTTLCSACGKQCQSPKDLRIHMRKHTGERPHSCDTCGKTYKTASALVVHKRSHTGERPHRCDMCDKAFYTKEVLKAHLRIHTGERPFVCKICQRAFSQNQALNTHMKIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -