Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754475.1:21393874-21395768[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2e-06 4e-05 24.3 1.3 1 23 241 263 241 263 0.98

2 12 2.8e-05 0.00057 20.7 1.9 1 23 272 294 272 294 0.96

3 12 0.0064 0.13 13.3 5.2 1 23 300 322 300 322 0.98

4 12 2.7e-06 5.6e-05 23.9 2.8 1 23 328 350 328 350 0.98

5 12 6.8e-06 0.00014 22.6 2.2 1 23 356 378 356 378 0.98

6 12 1.3e-05 0.00026 21.8 3.7 1 23 387 409 387 409 0.99

7 12 0.0042 0.086 13.8 5.1 1 23 415 437 415 437 0.98

8 12 7.3e-06 0.00015 22.5 1.2 1 23 451 473 451 473 0.98

9 12 2.7e-06 5.5e-05 23.9 3.5 1 23 479 501 479 501 0.97

10 12 5.5e-07 1.1e-05 26.1 1.2 1 23 507 529 507 529 0.99

11 12 1.6e-05 0.00033 21.5 4.7 1 23 535 557 535 557 0.99

12 12 6.2e-06 0.00013 22.8 1.2 1 23 563 586 563 586 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2e-06	4e-05	24.3	1.3	1	23	241	263	241	263	0.98
2	12	2.8e-05	0.00057	20.7	1.9	1	23	272	294	272	294	0.96
3	12	0.0064	0.13	13.3	5.2	1	23	300	322	300	322	0.98
4	12	2.7e-06	5.6e-05	23.9	2.8	1	23	328	350	328	350	0.98
5	12	6.8e-06	0.00014	22.6	2.2	1	23	356	378	356	378	0.98
6	12	1.3e-05	0.00026	21.8	3.7	1	23	387	409	387	409	0.99
7	12	0.0042	0.086	13.8	5.1	1	23	415	437	415	437	0.98
8	12	7.3e-06	0.00015	22.5	1.2	1	23	451	473	451	473	0.98
9	12	2.7e-06	5.5e-05	23.9	3.5	1	23	479	501	479	501	0.97
10	12	5.5e-07	1.1e-05	26.1	1.2	1	23	507	529	507	529	0.99
11	12	1.6e-05	0.00033	21.5	4.7	1	23	535	557	535	557	0.99
12	12	6.2e-06	0.00013	22.8	1.2	1	23	563	586	563	586	0.94

Sequence Information

Coding Sequence: ATGACACCTAAAAGAAGCTTTAATAAAGTTTGCAGACTATGTTTATCTGGAGACGCCGTTTTAACCGATATATTCTCGTTTTCTTCTGAATTGAAAGGAAAAATAGCAGATGTAGTTATGAAATGCGCTCCCGTTCAAATAGCGAAACAAGATGAATTGCCGAATTTCATATGTAAATTCTGTTACGCCCAACTGGAAAGAACAACAcgttttcaaaatcaaattatcCAATCTGAAAAAACACTACGTCGAAAACTTCGACGCTTATCCGGTGATGATCGAAGCGAGGCCGCTAGTTCAGTTTGCAAAGCTACTCAGGGTAGTGACGATTCTTTAAATAATGTAAGCATAAAATCAGTAGAAAATTATTACACAAAAGAGAACGTCTCTAATCTTCCTAAACTAGAAACAGTTTATATAAAAGATGAAACTGAATGCGTTCCCAAAATCGAATCGGTTGATATCGAAGTCGATGCTCAGCAATTCTCAAATACATTCGACGACGAAGACGACGACGACAACAATATCAAATGGGAACATGCGAATTATTACGATAGTTTAGAAGCTGTTGATGACGACTTTGAAAGCGATTCTGCCAACCAAGATAACGAAACCGCTGCTAGAGACAACAAAgcaatttcgaaaaaaagtcGCGTTACAGAAAAACTTCGATTAAGCAGTGTAAAAAAGCGCAAACAGTTGCATATAAGGGAGAGTctataccagtgtgacatttgtgacAAACGCTTTATCAGACCAAGTCGTTTAAAAAAGCACAAACTGATGCACGACGACAAAGAACCGCCAAAAacttatcagtgtgacgtttgcaacaaatCGTTTACAAAGACTATGAACTTAAAAAAGCATAAAGTTATTCACACAGGCGAAAAACCGCACCAATGTGACGTATGCGGTAACCACTTCACCGAactaagtaaattaaaaatgcataaGCGAAAACACACGggcgagaaaccgtaccagtgcgaCACTTGCGGAAAATGTTTCTCCCTGTCCATTAATTTAAAACGACATGTAAGactacatactggtgagaaaccgtacgtGTGTGACATTTGCAACAAATGCTTCAACCAACTCGATAGTTTAAAAGTACACAAATTGACACATGCCGACAAAGAATCGGctaaaccgtatcagtgtgacgtttgcagcaAATATTTTATCACTTCGAGTAGTTTCAAACGCCATAAACGTACGCATACTGGGGAAAAACCATACAAATGTGACGTTTGCGACAAGAACTTCACGTGTTCAACGTCTTTGAAAACACACAAACGCTTACACAGCATGGACGATTCGAATAAATTGATTAGTCAAAAGTTAttccagtgtgacatttgcactaaagattttgttcagcTGAGCGATttgaaaaaacacaaattaacGCATATGGGCAAGAAGttgtatcagtgtgacgtttgcaatagaTGTTTTACGCAATCAAGCAATTTAAAGGCGCATAAACTTCAACATACCGGCGAAAAACCATTTCAGTGTGATGTTTGCAACGAGTGCTTTATTTCGGCTGGTAATTTGAAGATTCATATGAGAaaacacactggtgagaagccgtacCAATGTGACGTCTGTAACAAGTGTTTCGCTCAGTCGATACATTTAAGAAGTCATAAACGtgttcatactggtgagaaaccatataaaTGCGATCTATGCGATAAGCGATTCACACAGTCTGGTAGCTTGAAAACGCATATTTTCTTATTGCATACATCTGATAAATCGTTAAAGATCGATATTTAA
Protein Sequence: MTPKRSFNKVCRLCLSGDAVLTDIFSFSSELKGKIADVVMKCAPVQIAKQDELPNFICKFCYAQLERTTRFQNQIIQSEKTLRRKLRRLSGDDRSEAASSVCKATQGSDDSLNNVSIKSVENYYTKENVSNLPKLETVYIKDETECVPKIESVDIEVDAQQFSNTFDDEDDDDNNIKWEHANYYDSLEAVDDDFESDSANQDNETAARDNKAISKKSRVTEKLRLSSVKKRKQLHIRESLYQCDICDKRFIRPSRLKKHKLMHDDKEPPKTYQCDVCNKSFTKTMNLKKHKVIHTGEKPHQCDVCGNHFTELSKLKMHKRKHTGEKPYQCDTCGKCFSLSINLKRHVRLHTGEKPYVCDICNKCFNQLDSLKVHKLTHADKESAKPYQCDVCSKYFITSSSFKRHKRTHTGEKPYKCDVCDKNFTCSTSLKTHKRLHSMDDSNKLISQKLFQCDICTKDFVQLSDLKKHKLTHMGKKLYQCDVCNRCFTQSSNLKAHKLQHTGEKPFQCDVCNECFISAGNLKIHMRKHTGEKPYQCDVCNKCFAQSIHLRSHKRVHTGEKPYKCDLCDKRFTQSGSLKTHIFLLHTSDKSLKIDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01511102;
90% Identity: iTF_01511102;
80% Identity: -