Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: sptf-2
Assembly: GCA_963575645.1
Location: OY754475.1:16562677-16567217[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00017 0.0035 18.2 3.4 1 23 271 295 271 295 0.98

2 16 0.0043 0.089 13.8 0.5 1 23 301 325 301 325 0.96

3 16 1.8e-05 0.00037 21.3 4.3 1 23 331 353 331 353 0.99

4 16 0.026 0.53 11.4 3.3 1 23 664 687 664 687 0.96

5 16 2e-06 4.1e-05 24.3 2.6 1 23 691 714 691 714 0.97

6 16 0.00011 0.0023 18.8 5.4 1 23 843 866 843 866 0.97

7 16 0.014 0.28 12.2 1.4 3 23 873 894 871 894 0.96

8 16 2.4e-05 0.0005 20.9 4.3 1 23 993 1016 993 1016 0.98

9 16 8e-05 0.0016 19.3 1.4 1 23 1025 1048 1025 1048 0.97

10 16 7e-05 0.0014 19.4 1.2 2 23 1094 1115 1093 1115 0.97

11 16 0.0002 0.004 18.0 4.0 1 23 1122 1144 1122 1144 0.99

12 16 1.1 22 6.3 0.2 3 23 1153 1171 1151 1171 0.84

13 16 6.3e-05 0.0013 19.6 1.7 1 23 1177 1199 1177 1199 0.98

14 16 4.6e-06 9.5e-05 23.2 0.6 1 23 1213 1235 1213 1235 0.98

15 16 2.5e-07 5.2e-06 27.1 1.6 1 23 1241 1264 1241 1264 0.98

16 16 0.00066 0.013 16.4 1.1 1 23 1270 1293 1270 1293 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00017	0.0035	18.2	3.4	1	23	271	295	271	295	0.98
2	16	0.0043	0.089	13.8	0.5	1	23	301	325	301	325	0.96
3	16	1.8e-05	0.00037	21.3	4.3	1	23	331	353	331	353	0.99
4	16	0.026	0.53	11.4	3.3	1	23	664	687	664	687	0.96
5	16	2e-06	4.1e-05	24.3	2.6	1	23	691	714	691	714	0.97
6	16	0.00011	0.0023	18.8	5.4	1	23	843	866	843	866	0.97
7	16	0.014	0.28	12.2	1.4	3	23	873	894	871	894	0.96
8	16	2.4e-05	0.0005	20.9	4.3	1	23	993	1016	993	1016	0.98
9	16	8e-05	0.0016	19.3	1.4	1	23	1025	1048	1025	1048	0.97
10	16	7e-05	0.0014	19.4	1.2	2	23	1094	1115	1093	1115	0.97
11	16	0.0002	0.004	18.0	4.0	1	23	1122	1144	1122	1144	0.99
12	16	1.1	22	6.3	0.2	3	23	1153	1171	1151	1171	0.84
13	16	6.3e-05	0.0013	19.6	1.7	1	23	1177	1199	1177	1199	0.98
14	16	4.6e-06	9.5e-05	23.2	0.6	1	23	1213	1235	1213	1235	0.98
15	16	2.5e-07	5.2e-06	27.1	1.6	1	23	1241	1264	1241	1264	0.98
16	16	0.00066	0.013	16.4	1.1	1	23	1270	1293	1270	1293	0.93

Sequence Information

Coding Sequence: ATGAATAAACGACTAGTAATTGAAGCGGAAGGATTAAAACAGGATATATGTCGATTCTGTTTAACGATGGATGTTCAACTAGCCCATATTTATAGCGGTTCAAGTAGTCTTGGGAGTACAATAGCTGAAGCTGCCATGGAATGTGCCACTATTCAGATTTCCCCGAATGATGGCTTGCCAATGTACGTCTGCAAAGATTGCTTTCTAAAACTTCAAGATActcaacaatttaaaaaaatggtcctCAAATCCGACGCTGTGTTAAGAACTTATCTCAAACAACTGCGTATTGACCGCCACTCAACAAGAAGCAATTTTCCCATAAAGGATGACCCTTTTGACCTTGACGAGGCACGGTGTATGGATCAAAATGACGACGACGAAATGAAGACTGAAGAGACCGACAATAATATCACGGTTATAACGACGTTGGAAAACATCAATTCTAATTCCgaggaaaatatcaatttagTAGATTATAGTTCCattgaaaaattaagttcatccatttcagaaaaaaacagaTCAGATGCACAAAGCGAATTCGAAAATAGAAATCTCGTAGATAGTGAaataatagacgctgatgaatCTGATAATCGAGAAATAAGTGGAAATACTTCTGACTATGTTGTAGAAATGGATGCAACAAGTTCTGAGACAGTAGATGATGCAGACAATTGTGAAATAGAGGAATCGGGGTCAAGAAGTGATGGTTTAGAAGAACAAACGCATGACGGTTCACAGAAAGTTAAAGTGAAAAAAGTAGCCTTCAGTGAAGGAGAAAGGCATTCGGATCGTAAAAAGCAGCACAAATGTCACATGCCAGGATGTAGCAAAGTTTACAGGACAGCATCGTATCTTCGTGTTCATTTAAGGCGACACACCGGAGAAAAACCCTTTGTATGCGATTGGCCGTTTTGCAGTAAAGATTTCATCCGCTCCGATAAATTGCTAAGACATAAGAAAATTCATACTGGAGAAAGACGATTCCAGTGTCTCGAATGCGATAAGAAGTTTATGCGTAGGGATCATTTATCAAAACACATTAAAACTCATACGAAACAAAAGACAATGGAGGCAGCTACATCAACTCAACCTGCTTCTTTAGACACTTCTAGTGGCGCTGAAAAAATGTTGATCACTATTACTACAGAAACAGACCAATCGGATTTAACTATTGCCGATGGTTTAAAATCTTCGATATTGAGTTGTATCAAGCCTTTACCGAAATCCACTGATGGAGTTTGTGAAACGCCTACAGAAAAAGGCATAAGCAATGAAAAAACACAAACACAAGCAAATACCACAAAAATTAATGAATCTTTGAGTGAGCGAATTGATAGAGTAATCTCAACCAATGAAAAAGTTTTATCAGCCAATTTCCATACAGGAAATAATACTGCATCAAGTTTAAAATCCGACCAGCAAGGAAAAACCAACTCAGAGTCGACTGAAAAAAGTTTAGAGGCTGAAAGCGACGTAACTTTGGGGAATATTAACATTACAGAGTGTGAAATAATAGAAAGTAATATATCCAATGATCACGAAACAAGTGGGAATATTTCGGATAATTCTTCAGTATCGGACCATACCGATGACTGGGTGTTAGAAGAAGATTCCACTTCTGAAACAGAAGAAGGCTCTGCTTCTGAAACAGAAGAAGAAACATCAGATACTTTTAATAAAAGCAATTCTTCAAAGGAAAATGAGATTAGTAATGCAGTTGAAAAACTAATTTCCGCCAATTCAGAGAATCACAATTTGGACGTGCAAACCAATGAACCTTTAGAGAATTCGAATATCGCAGATCCTGacatattaaatactaataaACGCAGCGATCAAGAACAATCTGGATGTTTTTTGAATAATAACACTTCGGACAAAGCCGTAGAAAGGGATGATGTTGACGCTCTACATTCAGAAGAAGTGGGGTCAAAAGATGATACTTCTGAAAAGAAATCTGGCAAAGATGAAAACACCGATTTCAAATGTATCATATGTAAAAAATTGTATACGAGTAAAGATAGTTTAtgtaaacatattttgaaagaacataaaaatatgtttcagtGTGAAATATGCAAAAAAAGCTTTAGTTCAAAATCTGATTTATGTAGACATGCGAAAATAATTCATGGTTCAGCTACAAACGAAAATAAATCAACGTCAAACGAACAAGAAACGTCAAGTAAATTAGATTCCTCGAAGGAAAATGATAACTCGATAAACAGTAAGCCGGCTAACAAGTTAACTTTTACCAGTTCAGCTAGCCAGAGTTTGGAAACACAAAGCGAAAAGTCTTTAGAAAAAACAAATCATGAAAATATATCGGACGCTAAAAAACGCAAGGGTCGAGAAAAAAGTGGAAGTTCTACGAGAGATCATGTTTCAGAAAGTGCGGTAGAAGTCGGCGTAACAAACTCTTTGATAGAGGATAATATTGACGACCGGCAAGCAGAAGAAGTGGACCCGACAGATGATAATTCCGAAAAGGAACCTGAGAAAAATAAGAAcccattttttaaatgtaaaatatgtaagaAATTCTATAATAGGAGAGATAATTTACATAGACATATTTTCAcagtacataaaaataaacttgttaATTGTCAAATATGCGAAAAAAGCTTTGTTTGCAAAGATGGTTTGAATagacatgtaaaaaaaattcatggctcgattgagtgttataaaaatgaaaataaatcaacGTCAAACGAACAAGAAATATCAAGTGAATTAGAAAAAACGAACTCCTCGAAGGAAATTGACAATTCGATAAACAGTAAATCGGCTAACCAGAGTTTGAAAACACAGAGCGAAAAGTCTTTAGAAAAAACAAATCAGGAAAATATATCGGACGCTAATAAACGCAAGGATGATTTTGAAGAAGATGTTTTTGACAACTGGCGTTCAGAAAAAGTGGTGTCGGAAGAAGATAGTTCTTACGAGAATAAAAGAATCGATTTCAAATgtgaaatatgtaaaatatcctATACTAGAAAAGATAATTTACGAAGACATCATTTGACAAAACATGAAAGCAATTTGACAAAGCATGAATTTAAGTGTGAAAAATGCGAAAAAAACTATGCTTCTAAAGACACTTTACTTAGACATATGACAAAAGTCCatgaatcaaataaaaatgaaaatgaaatcgGCATATATAGCTGCAATACTTGTAATGAAAAGTTTGAAGAACGTCGCGAATGTTACATCCATGAAGTCAGACACTTCGATAAGAATTACCAACGAGGCAAACCTATTCAGTGCAATGTGTGCGGGAAATTGTTTAAGAAactatataaattaaaagaGCACATCAGGAGACATGACGACGACGATAGACCTTTTCAATGCACTAAATGTGATAAAAAATTCAAGGCTAAATGCGATTTAGCAAGTCACCAACGAGTCCACGGCGACACTGGAATTTGCTCTATATGTCCCATTTGTGGAAAAGTTGTGAAATTTAACATGAGTCAACATATAGAACGTCACTCAGAAAATAGGCCATACATGTGTCAAAAATGTGGGAaatcatacaaaaataaaataagtttaaatgaACATAAAGAAACTCACGATGGAAAAATGGTTGAATCCCATAGCAGAGCGAAACCTTTTGAATGTCAAGAATGCGGTAAAGGTTTTACTCGTAAGGATTTCTTGGTTATGCACCTAAGGATGCACAGCGGGGAGAAGCCCTTCAAATGTGACGAGTGCGATAAACGTTTTTCACGAAATGACAATCTCAAAATACATTTAAAGAAAGTCCATGGCAAGTCTATGAAATACAAATGTCAAGTTTGCGACAagaaattcaaaatgaaacgcGATTTAGATAGTCACATCGAAGATAATCACAATGTGcccatgtaa
Protein Sequence: MNKRLVIEAEGLKQDICRFCLTMDVQLAHIYSGSSSLGSTIAEAAMECATIQISPNDGLPMYVCKDCFLKLQDTQQFKKMVLKSDAVLRTYLKQLRIDRHSTRSNFPIKDDPFDLDEARCMDQNDDDEMKTEETDNNITVITTLENINSNSEENINLVDYSSIEKLSSSISEKNRSDAQSEFENRNLVDSEIIDADESDNREISGNTSDYVVEMDATSSETVDDADNCEIEESGSRSDGLEEQTHDGSQKVKVKKVAFSEGERHSDRKKQHKCHMPGCSKVYRTASYLRVHLRRHTGEKPFVCDWPFCSKDFIRSDKLLRHKKIHTGERRFQCLECDKKFMRRDHLSKHIKTHTKQKTMEAATSTQPASLDTSSGAEKMLITITTETDQSDLTIADGLKSSILSCIKPLPKSTDGVCETPTEKGISNEKTQTQANTTKINESLSERIDRVISTNEKVLSANFHTGNNTASSLKSDQQGKTNSESTEKSLEAESDVTLGNINITECEIIESNISNDHETSGNISDNSSVSDHTDDWVLEEDSTSETEEGSASETEEETSDTFNKSNSSKENEISNAVEKLISANSENHNLDVQTNEPLENSNIADPDILNTNKRSDQEQSGCFLNNNTSDKAVERDDVDALHSEEVGSKDDTSEKKSGKDENTDFKCIICKKLYTSKDSLCKHILKEHKNMFQCEICKKSFSSKSDLCRHAKIIHGSATNENKSTSNEQETSSKLDSSKENDNSINSKPANKLTFTSSASQSLETQSEKSLEKTNHENISDAKKRKGREKSGSSTRDHVSESAVEVGVTNSLIEDNIDDRQAEEVDPTDDNSEKEPEKNKNPFFKCKICKKFYNRRDNLHRHIFTVHKNKLVNCQICEKSFVCKDGLNRHVKKIHGSIECYKNENKSTSNEQEISSELEKTNSSKEIDNSINSKSANQSLKTQSEKSLEKTNQENISDANKRKDDFEEDVFDNWRSEKVVSEEDSSYENKRIDFKCEICKISYTRKDNLRRHHLTKHESNLTKHEFKCEKCEKNYASKDTLLRHMTKVHESNKNENEIGIYSCNTCNEKFEERRECYIHEVRHFDKNYQRGKPIQCNVCGKLFKKLYKLKEHIRRHDDDDRPFQCTKCDKKFKAKCDLASHQRVHGDTGICSICPICGKVVKFNMSQHIERHSENRPYMCQKCGKSYKNKISLNEHKETHDGKMVESHSRAKPFECQECGKGFTRKDFLVMHLRMHSGEKPFKCDECDKRFSRNDNLKIHLKKVHGKSMKYKCQVCDKKFKMKRDLDSHIEDNHNVPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -