Xxan021415.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
ZNF579
Assembly
GCA_963575645.1
Location
OY754474.1:16128464-16134215[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 6.8e-05 0.0014 19.5 4.0 1 23 122 144 122 144 0.96
2 22 0.095 1.9 9.6 1.7 1 23 150 172 150 172 0.97
3 22 2.9 60 4.9 1.2 2 23 178 200 177 200 0.88
4 22 2.8e-05 0.00058 20.7 1.8 1 23 205 227 205 227 0.98
5 22 0.0037 0.076 14.0 1.3 1 23 233 256 233 256 0.97
6 22 0.00016 0.0033 18.3 0.8 1 23 289 311 289 311 0.98
7 22 0.0017 0.035 15.1 4.3 3 23 322 342 321 342 0.99
8 22 4.8e-06 9.9e-05 23.1 0.2 3 23 350 370 348 370 0.97
9 22 4.8 98 4.2 9.8 1 23 376 398 376 398 0.96
10 22 8.4e-05 0.0017 19.2 0.3 1 23 497 519 497 519 0.99
11 22 5.2e-05 0.0011 19.9 2.3 1 23 527 549 527 549 0.97
12 22 0.00033 0.0068 17.3 1.5 1 23 555 577 555 577 0.98
13 22 0.63 13 7.0 1.0 2 23 583 604 582 604 0.96
14 22 0.019 0.39 11.8 3.2 1 23 609 631 609 631 0.95
15 22 0.18 3.7 8.7 1.8 1 23 636 659 636 659 0.94
16 22 8.4 1.7e+02 3.5 0.3 3 23 668 686 667 686 0.67
17 22 5.8e-05 0.0012 19.7 2.2 1 23 691 714 691 714 0.97
18 22 8.3e-05 0.0017 19.2 0.1 1 23 747 769 747 769 0.99
19 22 0.0018 0.036 15.0 3.6 3 23 780 800 779 800 0.99
20 22 0.0006 0.012 16.5 0.7 3 23 808 828 806 828 0.95
21 22 0.0054 0.11 13.5 3.3 1 23 834 856 834 856 0.97
22 22 3.4e-06 6.9e-05 23.6 2.9 1 23 862 884 862 884 0.99

Sequence Information

Coding Sequence
ATGGAAGACCAAAAACCGGAATGGGAAGAACTAgacataaaatatttgattCCGGTCGTGACAATTAGCGATcagccaataaaaaaagaaaacgatttttgtaacataattagttcTGAAATTGATGAAGAATTGAAAACTAACAATAAAACGAAAGGCTTGCCGGTAAACGATATTTTCGTCGACAGTATATTAGACAATATTAAAATGGAAACAAACGATGCGGACGAGAATTTTATAGCAAACGAAAATGACAACGATACGTCATCGATACCACCTGGCGCGCACGAAAATATAAAAGAAGAAATTTCTTCGAAAGAATCAATCGATACCGACATTCATTCTGAAAATCGAAAATTCACGCACGCCTGTCACATTTGCAAAAAAGAGTTTTCCGAAAAAGGCAATTTGACAAAACATTTGCTGCGACACAAAGGCGAAACAAAATACAGTTGCGACTGTTGCAGTAAAGGTTTCTACGAATTGAGCGCTCTGAGTGTGCACATGAAACAACACGACGTCGAACCGTTGACTTGTAGCGAATGTCAAAAACAATTCATGTTAAAACTTCAGTTGGATTTGCACTTTAGTAAGTATCACGAAGAAAAGAAATACACGTGCGAAACGTGCGGCAAGAAGTTTCGAATGAAGAGTTTGTTGAAATCGCACGAGCTGTCGCATACGAAACGCGAGCCGTACTCGTGCACTCAATGCGACAAATGGTTTAAGTACGAGACGAGTTTAAAAACGCATGTCAGAAACGCTCACGACGGTCCGAAGAAAAAGGACATCTGTACGGTTTGTGGCAAAGAGGTGATGGCGTTGAAATATCACATGTTGAAGGTCCACGCTACGGAGCGACCGTATAAATGCGAACATTGCGAAAAGGCGTTCGCGGTTTTAtctcttttaaaaatacattcgaaAGTGCATACCGGAGAGACTCGCCTATACAAGGTTCTTTGTACGGTCTGCGGGAAGAAATGCGAAAGTTCAACGAGCCTACACGTTCACATGCGCTCCCATACAGGCGAGAGACCTCTGGCGTGTCCGATGTGTGACAAAACGTACAAAACCCCGTCGACTTTGGCAGTACATAGACGTTCTCATACGGGAGAACGTCCGCACGAATGCCACGTCTGCCACAAAAGGTTTTTGACCAAAAGCTGCATCAAGAGACATTCGCTTGTTCATACGAGCGAAAGGCATTATCAATGTAATATGGAACAAACGGACGGACTACCTCATCAAATTTGCACAAAATGTTTAAGTTCACTAAACGCAGCATACGAGTTCCGGCAAAAGACAGAAAGAATCGAGCGAATTTTGCACGACATATATAAGAGTACAAACAAAACAGTCGAACAAGTCGTTAGCGTTGACGACAACGTTGATTCCGAACCAGACGATTTTCAGTCGGACGAGTTAAAAGTCGAAAACGATCGATTGGATACATGCAAAGAGCGAACGGATTGTTGTAACAACAATTATAAGTGTGACGTgtgtaacaaaatattaataaacaattactcACTCGCACGCCATCTGGAGACCCACAGCAAGAACCGAAGGTACAGCCATCCGTGTCCGATCtgtaaaaaaaagttctttGAAAAAGGGAATTTGACCAAACATTTGTTGCGACACAACGGTGAAAAAAGATACAGTTGCGAACACTGCGACAAAAGTTTCTACGAACTAAGTATGCTCGCGTTGCACGTCAAACAGCATAACGTCGAGCCGATACAGTGTCGAGTGTGTCGAAAACAATTTATGCTTCAGTTGCAGTtggataatcatttaaaaaatcatattgaaTTTAAACATTTCTGTAAGACGTGCAATAAAGGTTTCCGCGAATTGAATCTGCTGAAAAAACACGAAATTTCACACAACGACGCCAATTTTCCATGTTCGAAGTGTGACAAGTGGTTTAAATACGAATTGAGTTTGGAAaagcattttcaaaatttccacGAAGGAAAACGGAAACAGGAAGTGTGCAAACTGTGCGGCAAAACCGTGGCCGGTTTAAAAAATCACACGATAATGATGCATTCCGATAAGCCTCATTACTGTTCTCAATGCGATAAGAGTTTCGCAGTGCTCACACTGTTGCGCCGACACATCAGGAGCACCCACGGAAGTCCGAAGAAGAAAGACGTTTGTACGGCATGCGGTAAAGAAGTCGTCGCATTGAAACACCATATGCTAGTCGTGCATTCGACCGAGCGCCCGTATAAATGCAAAGAGTGTGGGATCGGCTTTGCAGCGATATCGCTTCTAAATAATCACATGAAAGTACACACGGGCGAAACGCGGCTTTACAAGGTTCTGTGCACGACGTGCGGGAAGAAATTTCAAACGATGACTTGCTTACGCATTCATATGCGCATCCACACAGgaGAAAGGCCTCTAGCTTGTCCAATGTGCGACAAGAAATACAAGACACTGTCCGCTCTGGCTGTACACAAACATAGCCATACGAACGAGCGACCTCACGAGTGCTCCATCTGCCGCAAAAGGTTCTTCACCGTAACTCTTCTAAAAAAGCACACGCTCGTCCACACGGGAGAAAAACCATATCAATGCACGATCTGTAATCGAGGATTCACTCAGAGCTACAAACTCAAAACGCACTTGAAAAcgcattaa
Protein Sequence
MEDQKPEWEELDIKYLIPVVTISDQPIKKENDFCNIISSEIDEELKTNNKTKGLPVNDIFVDSILDNIKMETNDADENFIANENDNDTSSIPPGAHENIKEEISSKESIDTDIHSENRKFTHACHICKKEFSEKGNLTKHLLRHKGETKYSCDCCSKGFYELSALSVHMKQHDVEPLTCSECQKQFMLKLQLDLHFSKYHEEKKYTCETCGKKFRMKSLLKSHELSHTKREPYSCTQCDKWFKYETSLKTHVRNAHDGPKKKDICTVCGKEVMALKYHMLKVHATERPYKCEHCEKAFAVLSLLKIHSKVHTGETRLYKVLCTVCGKKCESSTSLHVHMRSHTGERPLACPMCDKTYKTPSTLAVHRRSHTGERPHECHVCHKRFLTKSCIKRHSLVHTSERHYQCNMEQTDGLPHQICTKCLSSLNAAYEFRQKTERIERILHDIYKSTNKTVEQVVSVDDNVDSEPDDFQSDELKVENDRLDTCKERTDCCNNNYKCDVCNKILINNYSLARHLETHSKNRRYSHPCPICKKKFFEKGNLTKHLLRHNGEKRYSCEHCDKSFYELSMLALHVKQHNVEPIQCRVCRKQFMLQLQLDNHLKNHIEFKHFCKTCNKGFRELNLLKKHEISHNDANFPCSKCDKWFKYELSLEKHFQNFHEGKRKQEVCKLCGKTVAGLKNHTIMMHSDKPHYCSQCDKSFAVLTLLRRHIRSTHGSPKKKDVCTACGKEVVALKHHMLVVHSTERPYKCKECGIGFAAISLLNNHMKVHTGETRLYKVLCTTCGKKFQTMTCLRIHMRIHTGERPLACPMCDKKYKTLSALAVHKHSHTNERPHECSICRKRFFTVTLLKKHTLVHTGEKPYQCTICNRGFTQSYKLKTHLKTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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