Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754475.1:21687486-21694258[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4e-05 0.0003 21.6 5.7 1 23 206 228 206 228 0.97

2 16 6e-05 0.0012 19.6 3.5 1 23 234 256 234 256 0.97

3 16 0.00017 0.0036 18.2 7.3 1 23 262 284 262 284 0.97

4 16 0.0025 0.051 14.6 5.1 1 23 290 312 290 312 0.96

5 16 0.0077 0.16 13.0 5.5 1 23 318 340 318 340 0.96

6 16 6.5e-05 0.0013 19.5 6.4 1 23 346 368 346 368 0.98

7 16 6.2e-05 0.0013 19.6 2.7 1 23 374 396 374 396 0.97

8 16 0.00093 0.019 15.9 5.5 1 23 402 424 402 424 0.97

9 16 8.6e-05 0.0018 19.2 3.4 1 23 430 452 430 452 0.98

10 16 0.0089 0.18 12.8 1.0 1 23 458 480 458 480 0.96

11 16 2.7e-05 0.00055 20.7 0.7 1 19 486 504 486 506 0.96

12 16 1.2e-05 0.00025 21.8 1.8 2 23 751 773 750 773 0.93

13 16 0.015 0.3 12.1 1.7 1 23 921 944 921 944 0.90

14 16 8.2e-08 1.7e-06 28.7 2.4 1 23 949 971 949 971 0.98

15 16 2.1e-07 4.4e-06 27.4 2.2 1 23 977 1000 977 1000 0.98

16 16 0.039 0.8 10.8 3.2 1 23 1006 1029 1006 1029 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4e-05	0.0003	21.6	5.7	1	23	206	228	206	228	0.97
2	16	6e-05	0.0012	19.6	3.5	1	23	234	256	234	256	0.97
3	16	0.00017	0.0036	18.2	7.3	1	23	262	284	262	284	0.97
4	16	0.0025	0.051	14.6	5.1	1	23	290	312	290	312	0.96
5	16	0.0077	0.16	13.0	5.5	1	23	318	340	318	340	0.96
6	16	6.5e-05	0.0013	19.5	6.4	1	23	346	368	346	368	0.98
7	16	6.2e-05	0.0013	19.6	2.7	1	23	374	396	374	396	0.97
8	16	0.00093	0.019	15.9	5.5	1	23	402	424	402	424	0.97
9	16	8.6e-05	0.0018	19.2	3.4	1	23	430	452	430	452	0.98
10	16	0.0089	0.18	12.8	1.0	1	23	458	480	458	480	0.96
11	16	2.7e-05	0.00055	20.7	0.7	1	19	486	504	486	506	0.96
12	16	1.2e-05	0.00025	21.8	1.8	2	23	751	773	750	773	0.93
13	16	0.015	0.3	12.1	1.7	1	23	921	944	921	944	0.90
14	16	8.2e-08	1.7e-06	28.7	2.4	1	23	949	971	949	971	0.98
15	16	2.1e-07	4.4e-06	27.4	2.2	1	23	977	1000	977	1000	0.98
16	16	0.039	0.8	10.8	3.2	1	23	1006	1029	1006	1029	0.97

Sequence Information

Coding Sequence: ATGAACGAACAAAATTTACGTGATAatgatttaaacaaaatatgtaggTTGTGTCTCGCTAATGACGCATTGATTCACGTGTTCACGTCACCCTGCAAACATGATATCGCaaacattattttgaaatgtgCTTCCGTTCAAGTGTTACAAGATGACGATCTTCCGAAATGTATATGCCAGCTTTGTTACGATCAATTGGAGAACATCCACACATTTCAAACGAAAGCGAGTGAGTCAGAAAGAACTTTGCGTCAATATATGCAACAATTGCACGCCACTGGTTGTCAGACCGAACCTAGAAATTCGGATGATGATTTTTCCGATGATTTGAAGGAGAAAGATAGTAATAGTGCTGACATACATTCGAAAGCAATATCCAAAGATTCGTTAAACATtaccaaagaaaataataggaaaGAAGAGACGCCAGGCAATCTTGAATTCACAATACTAAAGCCTGACAATACGATTGTAGATAATTCCATtgaaagaaatcaaaatattgaaaacaaaaacatgtGTCGAGTAACAACATTTGAGAAATGTGAAAAGTCAACGAGTATCAAACCAGTTAACTTCGAAAATAGCAAGTCTTCTAAAAATCAAGCTCAAAAacatcagtgtgacatttgcgaTAAATGTTTTTCTCAGCTGGGTCATCTAAAAACTCACATGTTACTTCATACAGGCGAAAAACCGTTTCAGTGTAGCGTTTGTAACAAATCTTTCACCCATTCGAATACTTTGAAAGCTCACAAACTActccatactggtgagaaaccgtatcagtgcgatgtttgcaataagtgtttcaccagatcttttcatttaaaacagcACAAACTGTTGCACATCGGGGTTAAACCCTATTTGTGCGATGTCTGCAGTAAAAGTTTTAGTCTTTTGCATcatttaaatagacacaaacgtTTACATACTGGGGAGAAACCGCACCGGTGTGAAGTTTGTAGTAAGTGTTTCTCGGACATGACTAGTTTAAAAACGCACAAATTacttcatactggtgagaaatcaCATCAGTGCGAAGTGTGcagtaaatgtttttataagtCTTCTGATCTAAAACGGCACATGACaatgcatactggtgagaaaccgtaccagtgtgatatttgtaacaGACGATTTTCGCAACTTATTCATTTAAAAAGGCATAAAATACTCCATACAggggagaaaccgtatcagtgtgacgtttgtagcaAGCGTTTTACTTTTTCGAGCTGTTTGAAAAAACACAAACTCCTACATTCCAGCGAGAAACCGTatgagtgtgacgtttgtaaaaagtgctttaCACAAATAAGTCTTTTAAAGTCTCATAAAAAGGTacataccggcgagaaaccgtaccaatgtAGCGTTTGTATTAAGCGTTTTGCTCATGTAGGTAATTTAAGAAAACACGAATTGCTTCATACTGACGAGAAACCGTATGAGTGTGAAGTATGCAACAAACGTTTTAATGATCCGTCATCTTTGAAAAGACATAAGTACCTCAAGCAACTGTGCGTTGACGATCACATATTAAGAAGGCATTCAATAAAAGACGATACATCAGACATTGACGTGTCACGATATACAGATAAAAGTAGCGATGATGAAATAATGACTAGAGATACTAGATTTGATCCAGACGACGATATCACGCCAATCCTGGAACTAACTGATGAGATTGTCGACgaaactccggaaattgaggatGAAATTGAACAAACTCAAACAGAGATCAATAAATgtcaaaatgtaaattttggcGTGGAATCAATTAACAAACGAGCTTTTATTTCAATTCCAATTACGGAAAAAATGTTGACAGACAAGCTTAGTGTACAAGATAGTTTAACAGTAAACGAAACAGAATCATCGAATGCATTAGAGAAAATCAACTCTTGTCAGGAGAATTATAACAGCAGTCCTGCTGAAAAAATAACTTCTGTTACTTCGGACACTGAAAGATTGAAAGCACAAAACGAAGAATCTTTTGAAATTGCAAAATATGTCGTAAATGGTAAAACACTTAGGAAACGCAAACGCCAAAATATAGACGTTGTTTCGAAAGATGCTTCAAGTTATGACGGCAGTGATGATGATTGGGAAATAGAAAAAGATCTTACTCCTGAATCAACCGACGGTTCTTCTGGTTCTGAAACAGAAGAGAGCATGATATCAGAAGATAATAATCTCAAAAACAAACATATATCTGAAGAAGATGAACAAACAAATCTAAAGTGTACCTCGTGCAGTAAAACTTTTTCGAGAAAAGATAATTTGCGAAGACATATCGCAGAAAAACATCGGTCAGATGATTTTGAAACATCGAATGAGTTAGAGAAAATCAACTCTTGTCAGGAGAATGAGAACATTAGTCCTGCTAAAAAAACAGCTTTTGTTACTTCAGACACTGACAGTTTGAAAGCACAAAACGAAGAATCTTTTGAAACTACAAATATCGTGAATGCTAAAATAGTTAGGAAACGCAAACGCCAAAATACAGACGTTGCTTCGCAAGATGCTCCCAGTGATGTTTCAGTATTCAACGATAGTGATGATGATTGGGAATTAGAAAAAGATCTTACTTCTGAATCAATCGACGGTTCTTCTGGTTCTAAAACAGAGGAGAGCATGACATCAGAAGATAATAATCTCGAAAACAAACGCGTATCTGAAGAATATGAACAAACAAATCTAAAGTGTTTTactgttcatgttaaaaacgtCCACGGAAGAAAACGCACTTTTAATTGTAAGGAATGCAAAAAGACATTTACTACTTATGCTGGTCTAAAATTCCATGAGCAATCGGCTCATAGTGTAAATCAATTTGAGTGCAATGAATGCGGTAAAAGTTTCTCTCGTAAGAGTTACTTGTTTATGCACCAGAGAATGCACAGCGGGGAGAAGCCCTATAAGTGTAACGAGTGCGATAAACGGTTTTCACGAAACGATAACCTCAAAATGCATTTAAAGAAAGTCCATAGCAAATCGATGAAATACAAGTGTAAAGTTTGCGATCGGCAGTTCGAAATGAGACATCGTTTAGATAACCATATTGAAAAGAAACATAATGTTCCAATGGAACGAgactaa
Protein Sequence: MNEQNLRDNDLNKICRLCLANDALIHVFTSPCKHDIANIILKCASVQVLQDDDLPKCICQLCYDQLENIHTFQTKASESERTLRQYMQQLHATGCQTEPRNSDDDFSDDLKEKDSNSADIHSKAISKDSLNITKENNRKEETPGNLEFTILKPDNTIVDNSIERNQNIENKNMCRVTTFEKCEKSTSIKPVNFENSKSSKNQAQKHQCDICDKCFSQLGHLKTHMLLHTGEKPFQCSVCNKSFTHSNTLKAHKLLHTGEKPYQCDVCNKCFTRSFHLKQHKLLHIGVKPYLCDVCSKSFSLLHHLNRHKRLHTGEKPHRCEVCSKCFSDMTSLKTHKLLHTGEKSHQCEVCSKCFYKSSDLKRHMTMHTGEKPYQCDICNRRFSQLIHLKRHKILHTGEKPYQCDVCSKRFTFSSCLKKHKLLHSSEKPYECDVCKKCFTQISLLKSHKKVHTGEKPYQCSVCIKRFAHVGNLRKHELLHTDEKPYECEVCNKRFNDPSSLKRHKYLKQLCVDDHILRRHSIKDDTSDIDVSRYTDKSSDDEIMTRDTRFDPDDDITPILELTDEIVDETPEIEDEIEQTQTEINKCQNVNFGVESINKRAFISIPITEKMLTDKLSVQDSLTVNETESSNALEKINSCQENYNSSPAEKITSVTSDTERLKAQNEESFEIAKYVVNGKTLRKRKRQNIDVVSKDASSYDGSDDDWEIEKDLTPESTDGSSGSETEESMISEDNNLKNKHISEEDEQTNLKCTSCSKTFSRKDNLRRHIAEKHRSDDFETSNELEKINSCQENENISPAKKTAFVTSDTDSLKAQNEESFETTNIVNAKIVRKRKRQNTDVASQDAPSDVSVFNDSDDDWELEKDLTSESIDGSSGSKTEESMTSEDNNLENKRVSEEYEQTNLKCFTVHVKNVHGRKRTFNCKECKKTFTTYAGLKFHEQSAHSVNQFECNECGKSFSRKSYLFMHQRMHSGEKPYKCNECDKRFSRNDNLKMHLKKVHSKSMKYKCKVCDRQFEMRHRLDNHIEKKHNVPMERD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -