Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754474.1:16194908-16200862[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.00018 0.0036 18.2 2.9 2 23 235 256 234 256 0.96

2 21 0.00011 0.0023 18.8 4.4 1 23 264 286 264 286 0.98

3 21 0.0046 0.095 13.7 0.4 1 23 292 314 292 314 0.98

4 21 0.021 0.42 11.7 0.3 2 23 320 341 319 341 0.96

5 21 0.052 1.1 10.4 1.3 1 23 346 368 346 368 0.94

6 21 0.00071 0.015 16.3 4.8 1 23 374 397 374 397 0.95

7 21 0.13 2.7 9.1 2.1 1 23 430 453 430 453 0.94

8 21 8.4e-06 0.00017 22.3 0.5 3 23 461 481 460 481 0.99

9 21 0.00018 0.0036 18.2 0.9 3 23 489 509 488 509 0.99

10 21 2.1e-05 0.00044 21.1 1.4 2 23 729 750 728 750 0.97

11 21 6.8e-05 0.0014 19.5 1.9 1 23 758 780 758 780 0.98

12 21 0.0044 0.09 13.8 0.3 1 23 786 808 786 808 0.98

13 21 1 21 6.3 0.7 2 23 814 836 813 836 0.95

14 21 0.0016 0.032 15.2 3.0 1 23 841 863 841 863 0.97

15 21 0.065 1.3 10.1 0.4 3 23 871 892 869 892 0.90

16 21 1.2 26 6.1 0.7 2 23 900 918 900 918 0.80

17 21 9.6e-05 0.002 19.0 2.2 1 23 925 948 925 948 0.97

18 21 0.0033 0.067 14.2 0.8 3 23 958 978 957 978 0.98

19 21 9.8e-06 0.0002 22.1 2.8 1 23 984 1006 984 1006 0.97

20 21 3.9e-05 0.0008 20.2 0.3 1 23 1012 1034 1012 1034 0.98

21 21 6.4e-06 0.00013 22.7 2.6 1 23 1040 1062 1040 1062 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.00018	0.0036	18.2	2.9	2	23	235	256	234	256	0.96
2	21	0.00011	0.0023	18.8	4.4	1	23	264	286	264	286	0.98
3	21	0.0046	0.095	13.7	0.4	1	23	292	314	292	314	0.98
4	21	0.021	0.42	11.7	0.3	2	23	320	341	319	341	0.96
5	21	0.052	1.1	10.4	1.3	1	23	346	368	346	368	0.94
6	21	0.00071	0.015	16.3	4.8	1	23	374	397	374	397	0.95
7	21	0.13	2.7	9.1	2.1	1	23	430	453	430	453	0.94
8	21	8.4e-06	0.00017	22.3	0.5	3	23	461	481	460	481	0.99
9	21	0.00018	0.0036	18.2	0.9	3	23	489	509	488	509	0.99
10	21	2.1e-05	0.00044	21.1	1.4	2	23	729	750	728	750	0.97
11	21	6.8e-05	0.0014	19.5	1.9	1	23	758	780	758	780	0.98
12	21	0.0044	0.09	13.8	0.3	1	23	786	808	786	808	0.98
13	21	1	21	6.3	0.7	2	23	814	836	813	836	0.95
14	21	0.0016	0.032	15.2	3.0	1	23	841	863	841	863	0.97
15	21	0.065	1.3	10.1	0.4	3	23	871	892	869	892	0.90
16	21	1.2	26	6.1	0.7	2	23	900	918	900	918	0.80
17	21	9.6e-05	0.002	19.0	2.2	1	23	925	948	925	948	0.97
18	21	0.0033	0.067	14.2	0.8	3	23	958	978	957	978	0.98
19	21	9.8e-06	0.0002	22.1	2.8	1	23	984	1006	984	1006	0.97
20	21	3.9e-05	0.0008	20.2	0.3	1	23	1012	1034	1012	1034	0.98
21	21	6.4e-06	0.00013	22.7	2.6	1	23	1040	1062	1040	1062	0.97

Sequence Information

Coding Sequence: ATGATGCTTTTGAATCACAATTTAGAGGTTATGAGAATGTTGCATACCTGCACTAGAATTAAGATTGGTTTAGATGATGGCTTGCCAGCTCATATTTGCAACGACTGTTCATTCGCCGTCGAGAAATGTTACAAATTTAAACACGAATGCGAGAAATCCGATCGGTTACTCAAAACAATACAGAAAGAATACGTTCAACAGCTAGAAAAACACAACGACATTGAGAAAAGCACGAAAGACGAAATCACAAATAACAGTGAAGCGTCAGACCTCAACGAAGAAAAAGGCCCCGAAATGAAAAAAGAGTATTGCGAAACGTCCGATATCAATGAAGAAAAAGTATCGGATATGAAAGAAGAGTATTACGATTACAGCGATAACAATGGTTGCGACGGTTTGTGGAAAGACGACGAAaccaaattatcaaattttagtTGTAGCGTCCAAAGGCCGATATGTTCACCGAAACTAGATTCGGATAACATTGAGAATAACGAACAGACCGACAAAAAAACAACTGCAAGTACAGTccgtaaaaaaaaacgaaagtcGCGTCGAAATCAGTCTAACAAGTTCGATCACAGTTTCAATAACCTAAGTAATCAAGTACAAACTATTGAAGATATTAAATTAAACGATATAAAAAAGGAACGCAAGCAGCCAATAGTGCTCGATCCAGAAAAATGCGACGAAAGTACTTGCACGTGTAAAATATGCGGAAAAGTTCTGGTTAATAAGCATACGTTGGCGCGCCATCTGGAAACGCACAACAAGAACCGACAATTCACGCATAAATGTGACATCTGTAGTAAAGGCTTCTACGAACTGGGACACTTGACAAAACACATGCGTCGACACGAAGGAAACAAACGATACTTCTGCGAGATATGCAATAAAGGTTTTTACGAACTGAGCGCCCAAGCAGTACACATGAAAAAGCACAAAGTCAAGCCAATGCCTTGCGATATATGCGGGAAAAAATTCCTCGTCAAATTGCAGCTCGAAATACACAAAAAGACGCACGAACAATGGAAACATTTTTGTCAAACGTGCGGGAAAGGTTTCGAAGCTTTACGGCTACTCAAGAAGCATTCGATCGTTCACAGTAAAGAGAAACCGTTCTTGTGCTTGGAATGTCACAATTCATTCAAGCATGAATCGACGCTGCGCAAACATATCAGAACCATACACGAGGGCATTAAAGATACGACCGTTTGTAATGTGTGCAGTAAACCGGTCACGTGTTTAAAATATCACATGTTAACTCATTACGGCGGCGAGAAACCTTTCAAGTGCATCGAATGCGAACTCTCGTTTTATCTCAACAGTCAATTAACTCAGCATATTTTGCACAAGCATCGCGGCGCAAAGCATGCATTGTGTCCGATATGCGGCAAAGAATGTATCAAGAATAGCGAACTCGAGGTCCATATGCGTACTCATACGGGCGAGCGTCCGCATGGGTGCGAATTCTGTGATAAGAAGTACAAAACTAAAAGCGCATTGGTCATACACAGGCGATCCCACACGAAGGAAAGACCGTATATTTATCTCAAAGATGGCTTGCCAAATCAAATTTGTTTCGAGTGCAAATATAGTGCTCGacaatcatttaaatttaagcaACGGTGCGaaaaattcgataaaatatTATGGGAAGTCTTCAGTAATGAAGTGATTCAAACGAAAATAAAAGACGATCAAGACGATGTCGACCGTGCAGAAAAAAAGAACGTGAAAATAGATCAAGAATGTACCGATGCTGAAAACGATAATAAGAATGTTAACGAATCTATTAAACAAGAAATAACCGTGAAATCCGATTTGGATTCAGAAAACGAGTCGCTCAGTTGTCTTCAGTCACTGATAAATATAAAGGAAGAAATCGATGGAAACAGCGACTGTTCAAATTCAGTTACGAAAAAAGAAATCGTTTCACCGAACGATTTCGAAGACGCGCATACCGATGGTGATAGCGTTAACGGCGAAGATGAGGTCAGCGAAGATTACTGTAAAAACGAAATGAGTAACGACACCGATTACAAAGAAGACGATTCTGCACaaggaaataaaattattatatttaaagtgAATCCGGACAAAAATTCcggtgaaataataaaaaggtATCCACCAAAACCGCCGGTCACTCTCGACCCTGAAAAATGTGATTTAGAAGCGCTAATGTGCAAGATTTGCGGTAAAACGTTGGTGACAAAACATACATTAGCGCGGCATATGGAAACGCataatgaaaatagaaaaattactCATACTTGTCCGACTTGTAACAAACCTTTTTACAACGTCGGTCAGTATAACAAACATATGCGATGGCACGAAGGAAAAACGAGGTACAACTGTGAAATCTGCAATAAACCGTTCTTCGAATTAAGCGCGCAAGCCGTGCACATGAAAAAACATAAAGTTAAACCGATGtcgtgtgacatttgtcaaaaacaattcctAGTTAAACTGCAACTAGagattcataaaaaaaagatgCACGAAAAAAAAGAATACTTCTGTTCGATCTGTAGCAAAAGTTTTCCACAACAGTGTCTCGTAAAAAAACACGAACGAATTCACACGACCGAGAAACCGTTTTTGTGTATTAAGTGTTCGGCTAGTTTTAAACAAGAGTGGTCATTGCGTATTCACATGAACAATGTACATTCGGAAAATTCGCACAAAGAAGTGTGCAACATTTGCGGCAAATCGGTTAAGAAACTACgatatcacaTGGTAACACATCAGAACAGAGAAAAAAGACACAAATGCGGAAAATGCGATCAGTCATTCTACACCGGTTACAGTCTCAACGCCCATATGCGAGTCAAACACGCAACCGAAAAACCATGTCTCGCTTTATGTCCTGTTTGCGGAAAACAGTGCGAAACCATCGGTTACTTAAATGCCCATATGCATATACacaaagCTGAACGTCCCCATTCCTGTAACGACTGTGgaaaaagtttcaaattaaaagtTCAACTGAAAAGTCACCAGATTACTCATACGGATTCAAGACCGTTCGTATGTAGTATGTGTGGAAGAGGTTTCACGGCCAAGAGTGTCTTAAAGAAGCATATCCTTACTCACACAGgtGAGCGTCCACACGTGTGCCACATATGCCAGAGAGCTTTTGCTCAACGAAGCGCGTTAAAAAcacatatgaaaatacattga
Protein Sequence: MMLLNHNLEVMRMLHTCTRIKIGLDDGLPAHICNDCSFAVEKCYKFKHECEKSDRLLKTIQKEYVQQLEKHNDIEKSTKDEITNNSEASDLNEEKGPEMKKEYCETSDINEEKVSDMKEEYYDYSDNNGCDGLWKDDETKLSNFSCSVQRPICSPKLDSDNIENNEQTDKKTTASTVRKKKRKSRRNQSNKFDHSFNNLSNQVQTIEDIKLNDIKKERKQPIVLDPEKCDESTCTCKICGKVLVNKHTLARHLETHNKNRQFTHKCDICSKGFYELGHLTKHMRRHEGNKRYFCEICNKGFYELSAQAVHMKKHKVKPMPCDICGKKFLVKLQLEIHKKTHEQWKHFCQTCGKGFEALRLLKKHSIVHSKEKPFLCLECHNSFKHESTLRKHIRTIHEGIKDTTVCNVCSKPVTCLKYHMLTHYGGEKPFKCIECELSFYLNSQLTQHILHKHRGAKHALCPICGKECIKNSELEVHMRTHTGERPHGCEFCDKKYKTKSALVIHRRSHTKERPYIYLKDGLPNQICFECKYSARQSFKFKQRCEKFDKILWEVFSNEVIQTKIKDDQDDVDRAEKKNVKIDQECTDAENDNKNVNESIKQEITVKSDLDSENESLSCLQSLINIKEEIDGNSDCSNSVTKKEIVSPNDFEDAHTDGDSVNGEDEVSEDYCKNEMSNDTDYKEDDSAQGNKIIIFKVNPDKNSGEIIKRYPPKPPVTLDPEKCDLEALMCKICGKTLVTKHTLARHMETHNENRKITHTCPTCNKPFYNVGQYNKHMRWHEGKTRYNCEICNKPFFELSAQAVHMKKHKVKPMSCDICQKQFLVKLQLEIHKKKMHEKKEYFCSICSKSFPQQCLVKKHERIHTTEKPFLCIKCSASFKQEWSLRIHMNNVHSENSHKEVCNICGKSVKKLRYHMVTHQNREKRHKCGKCDQSFYTGYSLNAHMRVKHATEKPCLALCPVCGKQCETIGYLNAHMHIHKAERPHSCNDCGKSFKLKVQLKSHQITHTDSRPFVCSMCGRGFTAKSVLKKHILTHTGERPHVCHICQRAFAQRSALKTHMKIH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -