Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754475.1:20039103-20044093[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.053 1.1 10.4 2.4 1 23 271 295 271 295 0.98

2 19 0.0025 0.052 14.5 0.3 1 23 301 325 301 325 0.96

3 19 1.5e-05 0.0003 21.6 4.2 1 23 331 353 331 353 0.99

4 19 0.00047 0.0097 16.8 3.5 1 23 816 839 816 839 0.97

5 19 5.9e-06 0.00012 22.8 3.9 1 23 843 866 843 866 0.97

6 19 0.00013 0.0026 18.6 4.3 1 23 999 1022 999 1022 0.97

7 19 0.016 0.34 12.0 1.4 3 23 1029 1050 1027 1050 0.96

8 19 0.0011 0.023 15.6 6.3 1 23 1144 1167 1144 1167 0.97

9 19 9.6e-05 0.002 19.0 1.4 1 23 1176 1199 1176 1199 0.97

10 19 0.0001 0.0021 18.9 1.5 2 23 1245 1266 1244 1266 0.97

11 19 3.8e-06 7.7e-05 23.4 2.8 1 23 1273 1295 1273 1295 0.99

12 19 2 42 5.4 0.2 3 23 1304 1322 1302 1322 0.83

13 19 2.4e-05 0.0005 20.9 3.2 1 23 1328 1350 1328 1350 0.98

14 19 0.012 0.24 12.5 1.3 2 23 1356 1378 1355 1379 0.95

15 19 0.0022 0.044 14.8 1.2 1 23 1383 1406 1383 1406 0.97

16 19 1.1 22 6.3 0.6 2 23 1413 1435 1412 1435 0.89

17 19 5.6e-06 0.00011 22.9 0.6 1 23 1441 1463 1441 1463 0.98

18 19 4e-07 8.2e-06 26.5 2.2 1 23 1469 1492 1469 1492 0.98

19 19 0.00079 0.016 16.1 1.1 1 23 1498 1521 1498 1521 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.053	1.1	10.4	2.4	1	23	271	295	271	295	0.98
2	19	0.0025	0.052	14.5	0.3	1	23	301	325	301	325	0.96
3	19	1.5e-05	0.0003	21.6	4.2	1	23	331	353	331	353	0.99
4	19	0.00047	0.0097	16.8	3.5	1	23	816	839	816	839	0.97
5	19	5.9e-06	0.00012	22.8	3.9	1	23	843	866	843	866	0.97
6	19	0.00013	0.0026	18.6	4.3	1	23	999	1022	999	1022	0.97
7	19	0.016	0.34	12.0	1.4	3	23	1029	1050	1027	1050	0.96
8	19	0.0011	0.023	15.6	6.3	1	23	1144	1167	1144	1167	0.97
9	19	9.6e-05	0.002	19.0	1.4	1	23	1176	1199	1176	1199	0.97
10	19	0.0001	0.0021	18.9	1.5	2	23	1245	1266	1244	1266	0.97
11	19	3.8e-06	7.7e-05	23.4	2.8	1	23	1273	1295	1273	1295	0.99
12	19	2	42	5.4	0.2	3	23	1304	1322	1302	1322	0.83
13	19	2.4e-05	0.0005	20.9	3.2	1	23	1328	1350	1328	1350	0.98
14	19	0.012	0.24	12.5	1.3	2	23	1356	1378	1355	1379	0.95
15	19	0.0022	0.044	14.8	1.2	1	23	1383	1406	1383	1406	0.97
16	19	1.1	22	6.3	0.6	2	23	1413	1435	1412	1435	0.89
17	19	5.6e-06	0.00011	22.9	0.6	1	23	1441	1463	1441	1463	0.98
18	19	4e-07	8.2e-06	26.5	2.2	1	23	1469	1492	1469	1492	0.98
19	19	0.00079	0.016	16.1	1.1	1	23	1498	1521	1498	1521	0.93

Sequence Information

Coding Sequence: ATGGATAAACAACTAGTAATTGAAGCGGAAGGATTAAAACAGGATATATGTCGATTCTGTTTAACGATGGATGTTCAACTAGCCCATATTTATAGCGGTTCAAGTAGTCTTGGGAGTACAATAGCTGAAGCTGCCATGGAATGTGCCACTATTCAGATTTCACCGAATGATGGCTTGCCAATGTACGTCTGTAAAGATTGCTTTCTAAAACTTCAAGACActcaacaatttaaaaaaatggtcctCAAATCCGACGCTGTGTTAAGAACTTATCTCAAACAGCTGCGTATTGACCGCCACTCAACAAGAAGCAGTTTTCCCATAAAGGATGACCCTTGTGACCTTGACGAGGCACTGTGCATGGATGAAAATGGCGACGACAAAATGAAGACTGAAGACACCGACAATAATATCACGGCATCAACGACGTTGGAAGACATCACTTCTAATTCAGAAGAGAATATTAATTTAGTAGGTAATAGTTCCCCTGACAAACTAAGTTCCTCCATTCCAAAAGACAGCGGATTAGATGCACAAAGCGAATTCGAAAATAGAAATCTCGTAGATAGAGAaataatagacgctgatgaatCTGATAATCGAGAAATAAGTGGAACTACTTCTGACTATGTTGTAGAAATGGATGCAACAAGTTCTGAGACAGAAGATGATGCAGACAATTGTGAAATAGAGGAATCGGGGTCAAGAAGTGATGGTTCAGAAGAACAAACGCATGACGGTTCACAGAAAGTTAAAGTGAAAAAAGTAGCCTTCAGTGAAGGAGAAAGGCATTCGGATCGTAAAAAGCAGCACAAATGTCACATGCCAGGATGCAGCAAAGTTTACGGGAAAGCATTGTATCTTCGTGTTCATTTAAGGCGACACACCGGAGAAAAACCCTTTGTATGCGATTGGCCGTTTTGCAGTAAAGATTTCATCCGCTCCGATGAATTGCTAAGACATAAGAAAATTCATACTGGGAAAAGACGGTTCCAGTGTCTCGAATGCGATAAGAAGTTTATGCGTAGGGATCATTTATCAAGGCACATTAAAACTCATACGAAACAAAAGACAATGGAGGCAGCTACATCAACTCAACCTGCTTCTTTAGACACTTCTGGCGGCGCTGAAAAAATGTTGATCACTATTACTACAGAAACTGACCAATCGGATTTAACTATTGCCGATGGTTTAGAATCTTCGATATTGAGTTGTATCAAGCCTTTACCGAAATCCACTGATGGAGTTTGTGAAACGCCTACAGAAAAAGGCATAAGCAATGAAACAACACAAACACAAGCAAATACCACAAAAATTAATGAATCTTTGAGTGAGCGAATTGATAGTGTAATCTCAAACAATGAAAAAGTTTCGTCAGCCAGTTTCCATACAGGAAATAATACTGCATCAAGTTTAAAATCCGACCAGCAAGAAAAAACCAACTCAGAGTCGGCTGATCAAAGTTTAGAAGCTAAAAGCGACGAAACTTTGGGAAATATTAACATTGCAGAGTGTGAAAAAATAGATAGTAATAAATCCAATGATCACGAAACAAGTGGGAATATTTCGGATAATTCTTCAGTATCGGACCATACCGATGACTGGGTGTTAGAAGAAGATTCCACTTCTGAAACAGAAGAAGGCTCTGCTTCTGAAACAGAAGAAGATTCCGGTTCTTCTGACGATTCCGCTGAGAATAAATttaagaacaataaaaaaaacaatttaaaacgtAAAATGTCTGAAGAAACCTTTTCTAGAAAACGTGTTTTACGTAGACATACAAAGCGTACACCAAACGAACAAGAAACATCggatacttttaataaaatcaattctTCAAAGGAAAATGAGAACTTATTGATTAGTAATGCAGTTGAAAAACTAATTTCCGCCAATTCAGCGAATCACAGTTTGGACGTGCAAACCAATGAACCTTTAGAGAATTCGAATATCGCAGAGCTTGacatattaaatactaataaACGCAGCGATCAAGAAAAATCTCGATATTCTTTGAACGATAACACTTTGGACAATGCTGTAGAAAGGGATTATGTTGACGCTTTACATTCAGAAGAAGTGGGGTCGAAAGATGATACTTCTGAAAAGAAATCTGGCAAAGATGAAAACACCGATTTCAGTAAGCCGGCTAACAAGTTAACTTTTACCAGTTCAGCTAGCCAGAGTTTGGAAACACAAAGCGAAGAGTCTTTAGAAAAAACAAATCATGAAAATATATCGGACGCTAAAAAACGCAAGGGTCGAGAAAAAAGTGGAAGTTCTACGAGAGGTCATGTTTCAGAAAGTGCTGTAGGAGTCGGCGTAAGTTTGTTACGCCAACTTCTACAGATGGAGGATAATATTGACGACCGGCAAGCAGAAGAAGTGGACCTGACAGATGATAATTCCGAAAAGGAAtctgagaaaaataaaaacccattttttgaatgtaaaatatgtaagaAATTGTATACGAGTAAAGATAGTTTAtgtaaacatattttgaaagaacataataatatatttcagtGTGAAATATGCAAAAAAAGCTTTAGTTCAAAATCTGATTTATGTAAACATGCGAAAAAAATTCATGGTTCAGCTACAAACGAAAATAAATCAACGTCAAACGAACAAGAAACGTCAAGTAAATTAGATTCCTCGAAGGAAAATGATAACTCGATAAACAGTAAGCCGGCTAACAAGTTAACTTTTACCAGTTCAGCTAGCCAGAGTTTGGAAACACAAAGCGAAGAGTCTTTAGAAAAAACAAATCATGAAAATATATCGGACGCTAAAAAACGCAAGGGTCGAGAAAAAAGTGGAAGTTCTACGAGAGGTCATGTTTCAGAAAGTGCTGTAGAAGTCGGCGTAAGTTTGTTACGCCAACTTCTACAGATGGAGGATAATATTGACGACCGGCAAGCAGAAGAAGTGGACCTGACAGATGATAATTCCGAAAAGGAAtctgagaaaaataaaaacccattttttgaatgtaaaatatgtaagaAATTCTATAATAGGAGAGATAATTTACATAGACATATTTTCAcagtacataaaaataaacttgttaATTGTCAAATATGCGAAAAAAGCTTTGTTTGCAAAGATGGTTTGAATagacatgtaaaaaaaattcatggctCAGCTGAGCAATCTATAAACGAAAATAAATCAACGTCAAACAAACAAGAAATATCAAGTGAATTAGAAAAAATGAACTCCTCGAAGGAAAATGACAATTCGATAAACAGTAAATCGGCTAACCAGAGTTTGAAAACACAGAGCGAAAAGTCTTTAGAAAAAACAGATCAGGAAAATATATCGGACGTTAACAAACGCAAGGATGATTTTGACAACTGGCGTTCAGAAAAAGTGGTGTCGGAAGAAGATAGTTCTTACGAGAATAAAAGAATTAAATTCAAATGTGAAATATGTAAACTATCCTTTACTACCAGATATAGTTTTCGAAGACATCATTTGAGAAAACATGAAAGCGATTTGACAAAGCATGAATTTAAGTGTGAAAAATGCGAAAAAAACTATGCTTCTAAAGACACTTTACTTAGACATATGACAAAAGTCCatgaatcaaataaaaatgaGAATGAAATCGGCATATATAGCTGCAATACTTGTAATGAAAAGTTTGAAGAACGTCGCGAATGTTACATCCATGAAGTCAGACACTTCGATAAGAATTACCAACCGGGCAAACCTATTCAGTGCAATGTGTGCGGGAAATCGTTTGAGACActatgtaaattaaaattgcACATCAGGGGACATGACGACGGCGATAGACCTTTTCAATGCACTAAATGTGATAAAAAATTCATGACTAAATACGATTTAGCAAAGCACCAACGAGTCCACGGCGACACTGGAATTTCCTCTATATGTCCCATTTGTGGAAAAGCTGTGAAATTTAACATGAGTCAGCATATAGAACGTCACTCAGAAAATAGGCCATACATGTGTCACGAATGTGGGAAATCATACAAAGATAAGAAAAGTTTAAATGAACATAAAGAAACTCACGATGGAAAAATGGTTGAATGTAAAATCTGCAACAAAAGTTTTAAAGGGGAATTATTGTTGCGGGGACATATTAAAAATAGGCACCACGGAAaagaatttaaatgtaaaatttgttttaaaatttccagTTCGaagcaaactttaaaaattcatattgaAAGAGTTCATCAAAAGAAACATACTTTAAATTGTTCTGAATGTAAAAAGGCATTTTTTTCTCCAATGGGTTTAATGTTTCATAAGAAATCAGCCCATAGCAGAGCGAAACCTTTTGAATGTCAAGAATGCGGTAAAGGTTTTACTCGTAAGGATTTCTTGGTTATGCACCTGAGGATGCACAGCGGGGAGAAGCCCTACAAGTGTGACAAGTGCGataaacgtttttctcgaaatgACAATCTCAAAATACATTTAAAGAAAGTTCATGGCAAGTCTATGAAATACAAATGTCAAGTTTGCGACAagaaattcaaaatgaaacgcGATTTAGATAGTCACATCGAAGATAATCACAATGTGCCCATGTAa
Protein Sequence: MDKQLVIEAEGLKQDICRFCLTMDVQLAHIYSGSSSLGSTIAEAAMECATIQISPNDGLPMYVCKDCFLKLQDTQQFKKMVLKSDAVLRTYLKQLRIDRHSTRSSFPIKDDPCDLDEALCMDENGDDKMKTEDTDNNITASTTLEDITSNSEENINLVGNSSPDKLSSSIPKDSGLDAQSEFENRNLVDREIIDADESDNREISGTTSDYVVEMDATSSETEDDADNCEIEESGSRSDGSEEQTHDGSQKVKVKKVAFSEGERHSDRKKQHKCHMPGCSKVYGKALYLRVHLRRHTGEKPFVCDWPFCSKDFIRSDELLRHKKIHTGKRRFQCLECDKKFMRRDHLSRHIKTHTKQKTMEAATSTQPASLDTSGGAEKMLITITTETDQSDLTIADGLESSILSCIKPLPKSTDGVCETPTEKGISNETTQTQANTTKINESLSERIDSVISNNEKVSSASFHTGNNTASSLKSDQQEKTNSESADQSLEAKSDETLGNINIAECEKIDSNKSNDHETSGNISDNSSVSDHTDDWVLEEDSTSETEEGSASETEEDSGSSDDSAENKFKNNKKNNLKRKMSEETFSRKRVLRRHTKRTPNEQETSDTFNKINSSKENENLLISNAVEKLISANSANHSLDVQTNEPLENSNIAELDILNTNKRSDQEKSRYSLNDNTLDNAVERDYVDALHSEEVGSKDDTSEKKSGKDENTDFSKPANKLTFTSSASQSLETQSEESLEKTNHENISDAKKRKGREKSGSSTRGHVSESAVGVGVSLLRQLLQMEDNIDDRQAEEVDLTDDNSEKESEKNKNPFFECKICKKLYTSKDSLCKHILKEHNNIFQCEICKKSFSSKSDLCKHAKKIHGSATNENKSTSNEQETSSKLDSSKENDNSINSKPANKLTFTSSASQSLETQSEESLEKTNHENISDAKKRKGREKSGSSTRGHVSESAVEVGVSLLRQLLQMEDNIDDRQAEEVDLTDDNSEKESEKNKNPFFECKICKKFYNRRDNLHRHIFTVHKNKLVNCQICEKSFVCKDGLNRHVKKIHGSAEQSINENKSTSNKQEISSELEKMNSSKENDNSINSKSANQSLKTQSEKSLEKTDQENISDVNKRKDDFDNWRSEKVVSEEDSSYENKRIKFKCEICKLSFTTRYSFRRHHLRKHESDLTKHEFKCEKCEKNYASKDTLLRHMTKVHESNKNENEIGIYSCNTCNEKFEERRECYIHEVRHFDKNYQPGKPIQCNVCGKSFETLCKLKLHIRGHDDGDRPFQCTKCDKKFMTKYDLAKHQRVHGDTGISSICPICGKAVKFNMSQHIERHSENRPYMCHECGKSYKDKKSLNEHKETHDGKMVECKICNKSFKGELLLRGHIKNRHHGKEFKCKICFKISSSKQTLKIHIERVHQKKHTLNCSECKKAFFSPMGLMFHKKSAHSRAKPFECQECGKGFTRKDFLVMHLRMHSGEKPYKCDKCDKRFSRNDNLKIHLKKVHGKSMKYKCQVCDKKFKMKRDLDSHIEDNHNVPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -