Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754469.1:9742840-9745757[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.3e-06 6.8e-05 23.6 0.7 1 23 19 41 19 41 0.98

2 19 0.0065 0.13 13.3 3.4 1 23 47 69 47 69 0.95

3 19 0.26 5.2 8.2 5.2 1 23 75 97 75 97 0.97

4 19 0.0045 0.092 13.8 1.3 3 23 105 125 104 125 0.96

5 19 1.7e-05 0.00035 21.4 0.9 2 23 131 152 131 152 0.98

6 19 0.11 2.2 9.4 0.8 1 23 163 186 163 186 0.90

7 19 0.00014 0.0028 18.5 1.2 1 23 192 214 192 214 0.98

8 19 1.6e-06 3.2e-05 24.6 0.4 1 23 220 242 220 242 0.99

9 19 2.3e-05 0.00048 20.9 0.3 1 21 248 268 248 269 0.96

10 19 0.022 0.46 11.6 0.4 1 23 295 317 295 317 0.97

11 19 3.1e-05 0.00064 20.5 1.0 1 23 323 345 323 345 0.97

12 19 4.8e-05 0.00098 20.0 0.1 1 23 351 373 351 373 0.98

13 19 0.35 7.3 7.8 0.2 3 23 381 402 380 402 0.92

14 19 0.00018 0.0037 18.1 3.3 1 23 407 429 407 429 0.95

15 19 0.0012 0.025 15.5 0.7 1 23 437 460 437 460 0.93

16 19 0.0094 0.19 12.7 2.1 1 23 466 488 466 488 0.97

17 19 1.1e-05 0.00022 22.0 3.4 1 23 494 516 494 516 0.98

18 19 4.2e-06 8.6e-05 23.3 3.8 1 23 522 544 522 544 0.98

19 19 0.0081 0.17 13.0 0.6 1 23 550 573 550 573 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.3e-06	6.8e-05	23.6	0.7	1	23	19	41	19	41	0.98
2	19	0.0065	0.13	13.3	3.4	1	23	47	69	47	69	0.95
3	19	0.26	5.2	8.2	5.2	1	23	75	97	75	97	0.97
4	19	0.0045	0.092	13.8	1.3	3	23	105	125	104	125	0.96
5	19	1.7e-05	0.00035	21.4	0.9	2	23	131	152	131	152	0.98
6	19	0.11	2.2	9.4	0.8	1	23	163	186	163	186	0.90
7	19	0.00014	0.0028	18.5	1.2	1	23	192	214	192	214	0.98
8	19	1.6e-06	3.2e-05	24.6	0.4	1	23	220	242	220	242	0.99
9	19	2.3e-05	0.00048	20.9	0.3	1	21	248	268	248	269	0.96
10	19	0.022	0.46	11.6	0.4	1	23	295	317	295	317	0.97
11	19	3.1e-05	0.00064	20.5	1.0	1	23	323	345	323	345	0.97
12	19	4.8e-05	0.00098	20.0	0.1	1	23	351	373	351	373	0.98
13	19	0.35	7.3	7.8	0.2	3	23	381	402	380	402	0.92
14	19	0.00018	0.0037	18.1	3.3	1	23	407	429	407	429	0.95
15	19	0.0012	0.025	15.5	0.7	1	23	437	460	437	460	0.93
16	19	0.0094	0.19	12.7	2.1	1	23	466	488	466	488	0.97
17	19	1.1e-05	0.00022	22.0	3.4	1	23	494	516	494	516	0.98
18	19	4.2e-06	8.6e-05	23.3	3.8	1	23	522	544	522	544	0.98
19	19	0.0081	0.17	13.0	0.6	1	23	550	573	550	573	0.97

Sequence Information

Coding Sequence: ATGAACTCGTTCCATATGGCAATACATCGCAGGATACATACCGACGAGAGACCTTTTGTCTGTAGTGTTTGTAGTAAATCTTTTAGGAGTAACGGCATGCTAAAATCTCATATGTCGGTGCACTCGACCGAGAAACCGTTTTCGTGCGGCGTGTGCAATCGTCACTTTAAAACGAAACAGTATTTGTTGACTCACAGTTTGTTGCACGGCGCCGAGAAAAAACACGTTTGCGACATTTGCGGCTATTCGtgttttcaaaagaaaattctTACGATGCACAGAAAGagacacaataaaaattatttggtgTTCTGCGAAAGTTGCGGgaaaggtttttttaataatacggaCCTGAACGCTCACAAATTTAAACATAGGGAAGACAAACCGAAATGTCAATTTTGCGGCAAGTCGTACAGCTACGAGGCCGACTTGAAAAGGCACGTTCAGACGCACGATccgaatttcgaaaataaaaacccGAAATACAGATGCGAACGTTGCGACAAGACGTTTTTGTCGAAGCGCGGATTTGATTTGCATGTTTTGGTTCAGCACGTCGAGCGAAATTTGTACGTGTGCGACATTTGCGGGAAGAAtttgagcactaagaaaggctTGCACCTTCACTTGCAAAGGCATTCGGGGGAGAAGCCTTTCAAGTGCGTCGATTGCGGGAAAGTGTTCGGTACCAAAGATAATCTCGTTTTGCACTCGCGTACGCATTCGGGGGTGAAGCCGTACGAATGTTTGGAGTGCGGAAAACGGTTCACCCAGCGCAGCACTCTTGTAGTTCATAAACGAGAGGCGTCGTTAGCTTTGAAAGAGGAGTTCTTTGTAGATTTTGACAATGACAATAATTACACTTTTGCGGACGGAGCTTACGCGTGTAACGTTTGCGGAAAGAAGTGGGGCGTAAAATCGAGCTGGAAACGCCATTTCATGACCCATATTGATCTGAAACCGTTTGCGTGCGACGTGTGCCAGAAGAGATTTAAAATGTCGTACGAACTGAAGGCCCATCGGAAAATACACGGCGACCGCGTTAAATTTCAGTGCGACGATTGCCCGAAAGTGTTTCAGTCGAAAGACGGTCTCATCTTACACAAACTTGTACATTCCCAAAATTACAAGGTGTTCTGTTCGTTTTGCGAGCGCGGTTTCTTGTACGCGTCTCAATTGCGCACTCACATCGACGCCGAGCACAATAAAACCCAACACGCGTGCGCCGTTTGCCACAAGTCGTTTTCGACCGTGTCGAATTTGAACGTGCACTCGAAAAAGCACGATCCCGATTACGAGAAGCGATTCAAATGCGAGATTTGCGACAGAGCTTTCGTTTACAAAGCCGGGCTGATCTATCACGAGGACAGTTGTCATAAGAAcgttaaaaattttacttgCGACGTTTGCGGCAAGTCTATGACGTGTCGCGGCAGCTTGAAGAAACATATGCTGTTGCATTCGGGAGAGAAGCCCTTTAATTGCGAAACGTGCGGCAAAAGTTTCTCCAAACGACACACTTTGGTCCTGCATCTCAGGACGCATTCGGGCGTCAAACCGTACGAATGCACCGAGTGTCATAAAAAGTTCACGCAAAGAACCAGTCTAGTTGTCCACATGAGATATCATAGCGGGGAGAGGCCCTACGCGTGTCACTTGTGTCCCGAAACGTTTGTCAGTAGAACTATTCTCGTCactcatattaaaaaacttcacgGGTTTTAA
Protein Sequence: MNSFHMAIHRRIHTDERPFVCSVCSKSFRSNGMLKSHMSVHSTEKPFSCGVCNRHFKTKQYLLTHSLLHGAEKKHVCDICGYSCFQKKILTMHRKRHNKNYLVFCESCGKGFFNNTDLNAHKFKHREDKPKCQFCGKSYSYEADLKRHVQTHDPNFENKNPKYRCERCDKTFLSKRGFDLHVLVQHVERNLYVCDICGKNLSTKKGLHLHLQRHSGEKPFKCVDCGKVFGTKDNLVLHSRTHSGVKPYECLECGKRFTQRSTLVVHKREASLALKEEFFVDFDNDNNYTFADGAYACNVCGKKWGVKSSWKRHFMTHIDLKPFACDVCQKRFKMSYELKAHRKIHGDRVKFQCDDCPKVFQSKDGLILHKLVHSQNYKVFCSFCERGFLYASQLRTHIDAEHNKTQHACAVCHKSFSTVSNLNVHSKKHDPDYEKRFKCEICDRAFVYKAGLIYHEDSCHKNVKNFTCDVCGKSMTCRGSLKKHMLLHSGEKPFNCETCGKSFSKRHTLVLHLRTHSGVKPYECTECHKKFTQRTSLVVHMRYHSGERPYACHLCPETFVSRTILVTHIKKLHGF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -