Xxan022481.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754475.1:16237849-16267028[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.0011 0.023 15.7 5.3 1 23 247 269 247 269 0.99
2 17 2.5e-05 0.00052 20.8 1.2 1 23 275 297 275 297 0.99
3 17 0.00057 0.012 16.6 5.7 1 23 303 325 303 325 0.98
4 17 8.6e-06 0.00018 22.3 1.0 1 23 331 353 331 353 0.99
5 17 0.038 0.78 10.8 7.9 1 23 359 381 359 381 0.99
6 17 4.3e-06 8.9e-05 23.2 3.5 1 23 387 409 387 409 0.99
7 17 0.00052 0.011 16.7 6.1 1 23 415 437 415 437 0.99
8 17 0.0011 0.022 15.7 5.6 1 23 1147 1169 1147 1169 0.99
9 17 0.00023 0.0047 17.8 2.5 1 23 1175 1197 1175 1197 0.99
10 17 0.00067 0.014 16.4 6.9 1 23 1203 1225 1203 1225 0.98
11 17 2.6e-06 5.3e-05 24.0 0.9 1 23 1231 1253 1231 1253 0.99
12 17 1.2e-05 0.00025 21.9 2.4 1 23 1259 1281 1259 1281 0.98
13 17 0.00066 0.014 16.4 7.3 1 23 1470 1492 1470 1492 0.99
14 17 6.4e-06 0.00013 22.7 2.6 1 23 1498 1520 1498 1520 0.99
15 17 4.9e-06 0.0001 23.1 5.9 1 23 1526 1548 1526 1548 0.99
16 17 0.00023 0.0047 17.8 7.2 1 23 1554 1576 1554 1576 0.99
17 17 6e-06 0.00012 22.8 3.4 1 23 1582 1604 1582 1604 0.99

Sequence Information

Coding Sequence
ATGGAACAAATATCAATAATTGGATCTGACTTAGGTTCAATGTGCCGATTGTGCTTATCAAGAGGCGTTGTACTGTTTGACGTATTTAGGATTTCACCCAAAATGAAGAATAGCGTAGCAGGTGTAATAATGAAATGTGCCGCTGTCCAGATAACTAGAGGCGACGGGATGCCGAATTTCATCTGTCAATCATGTTACACTCAACTGGAGAAAACTCACCAGTTTCAGATGCAAATAGAGAATTCTGACAAAACACTGCGACGCTATTTTCAGCAATTATTTGCTTctgacaaacaaataaaaactgaaaGTTCTGTTCAACCTTCTGAAAATCATTTAATCCTTAACAGTAATAAAGATATTGTCAAATGTGAATCTTTAGAGCTCCATGATGAATTTGACATAGATCTTGGTTGGAAAGAGAACGACCCTGCAATTTTCAGTGAAGAAAATAAACATAAcgaagaaattttattaaaatccgaaatcaaagacgaacagATGGATGacagtttattaattttaacagaaCCAGTCGGCGATACGGTAAATGCTTCATTAAACACCAATGAAAATGAAATTAGCTGCGAggatatgaaaattaatattagcCTCGCATCAGAGATTTCGTGTTTACGTTCTGCAAATGTGACTGAAAATTTCAGTAAGTGtgatgaaacaaatgaaaatcttTCGGCCTATCGTCAGAAGCACAAAGAAGcaaataaattgaaatcttATAAATGCGACATTTGTAACAAGTGTTTCTCTGGTTATTCGAGTTTCTATTATCATAGACGagtacacactggtgagaaaccttatcagtgtgatatttgtaataagtatttttcTTCCTCATTCAGTTTAATTGTACATAAACGTGTTCATACTGGTGTAAAACCtcatcagtgtgacctttgcaATAAGTTTTTCTCTCAGTTAAAACATTTGAATGTTCACAAGCGTatccatactggtgagaaaccgtatcagtgtgacctttgtaataagtcTTTCTCTCAGGCAGGCTCTTTATATAATCACAAGCGTATACACACcggcgagaaaccttatcagtgtaacCACTGTACTAAGTATTTCTCTTGCTCATCCGATTTAAGTAAACACAAGCGTATtcatactggcgagaaaccttatcagtgtgacctttgtaataagtgtttctctcagtCAAGTAGTTTAAATATACACAAGCGTATACACACTGGTGtaaaaccttatcagtgtgaccgtTGTAGTAAGTGTTTCTGTGACTTAGGCAGTTTAAATAGACATAAGCGTATACATACGGGGGTGTGTCCAATAGAGGATGTAGAAGAAGATGGAGACTACCCCAATGATGAAATTGAACAAAAGTTTGATGTCTATCCTGCTTTTCAAATGGGCATTAACCTGCCCATCGACATCTCCCCACTCGTCGAAGTTGATTTTGATACTCCTGGGCCCTCAAAGAAGACGCGTAGAATGAAACCAATATCAATAATTGGATCTGACTTAGGTTCAATGTGCCGATTGTGCTTATCAAAAGGCGTTGCACTGTTTGACGTATTTAAGATTTCACCCAAAATGAAGAATAGCGTGGCAGGTGTAATAATGAAATGTGCCGCTGTCCAGATAACTAGAGGCGACGGGATGCCAAAATTCATCTGTCAATCATGTTACACTCAACTGGAGAAAACTCACCAGTTTCAGATGCAAATAGAGAATTCTGACAGAACACTGCGACGCTATTTTCAGCAAACCAATAAAAAACCAATCAAAACTGAAAGTTCTGTTCAACCTTCTGAAAATCATTTAATCTTTAACACTAATAAGGATGTCGTGAAATGTGAATCTGTTGAGTTCCAAGATGGTTCTGATTTAAATCTTGGTTGGAAAGAGAACGACCCTGCAATTTTCAGCGAAGAAAATAAACATAAcgaagaaatatttataaaatccgaaatcaaagatGAACCGATGgatgacaatttattgtttctaACAGAGTCAGTCGACGATACGGTAAACGCATCGTTTTTCGCCAATGAAAATGAAGATAACTGCGAAGACTCGAAAATTAATATTGGCCATGCATCGGAGATTTCGTGTTTACGTTCTGCCACTGTGACTGAAAATTTCAAATCTGTCGATGACTCCGATCTTGATTGGAAAGAGAGCGAACCTGCAAATTTcattcaagaaaataaaaatgtcgataaaatttctttaaaattcgaaattaaagaCGAACAGATGGATGATAGTTTACTAATTCTAACAGACTCAGTCGATGGCATGGTAAACGTATCATCGAACGACGATGGTAATGAAATTGTCTGCGAAGACacgaaaataaatattggtCACGTATCAGAGATATCGTGTTTACGTTCTGTAAATGTGACTGAAAATTTCAATAAAATGAAACAAATATCAATAATTGCATCAAGCTTAAGTTCAATGTGCCGATTGTGCTTATCAAGAGGCGTTATACTGTTTGACGTATTTAGGATTTCACACAAAATGAATAGCGTGGCAGGTGTAATAATGAAATGTGCTGCTGTCCAGATAACTAGGGGCGACGGGATGCCGAATTTCATCTGTGAATCATGTTGCACTCAACTGGAGAAAACTCACCAGTTTCTGATGCAAATAGAGAATTCTGACAAAACACTGCGACGCTATTTTCAGCAATTATTTACTTCTGACGAACCAATCAAAACTGAATGTTCTGTTCAACCTTCTGGAAGTCATTTAATCCTTAACAGTAATAAAGATATTGTGAAAAGTGAATCTTTACAGCTCCATGATGAGTTTGATATAGATCTTGGTTTGAAAGAGAGCGAAGCCGCGAATTTcattcaagaaaataaaaatatcgatggaATTACTTTGGATtccgaaatcaaagacgaacagATGGAtgacaatttattaattctaacagAATCAGTCGATGACTCCGATCTTGATTGGAAAGAGAGCGAAGCCGCGAATTTcattcaagaaaataaaaatatcgatgtaaTTACTTTGAATtccgaaatcaaagacgaacagATGGAtgacaatttattaattctaacagAATCAGTCGATGACTCCGATCTTGATTGGAAAGAGAGCGAACCTGCAAATTTcattcaagaaaataaaaatattgatggaatttctttaaaatccgaaatcaaagacgaacagATGGATGATAGTATACTAATTCTAACAGACTCAGTCGATAGCAGGGCAAACTTATCATCTAACGACGATGGTCATGAAATTGTCTGCGAAGACACGAAAATAAATATCGTATCAGAGATTTCGTGTTTACGTTCCGCAAATGTGACTGAAAATTTCAGTAAGTGtgatgaaacaaatgaaaatcttTCGGCCTATCGTCAGAAGCACAAAGAAGcaaataaattgaaatcttATAAATGCGACATTTGTAACAAGTGTTTCTCTGGTTATTCGACTTTCTTTTATCATAGACGAGTACACagtggtgagaaaccttatcagtgtgatgtttgtaataagtgcGTTTCTTCCTCATTCAGTTTAACTGTACACAAACGTGTTCATACTGGTGTAAACGCtcatcagtgtgacctttgcaATAAGTTTTTCTCtcagttaaaacatttaaatgagCACAAgcgtacacatactggtgagaaaccgtatcagtgtgacctttgtaataagtcTTTCTCTCAGTCAGGCTCTTTAAATAttcacaagcgtatacatactggtgagaaaccttatcagtgtgatatttgtaataagtgtttctctttCTTAGGCAATTTAATTAGACACAATCGTATACACACTGGTATAACTAGGGGCGACGGGATGCCGAATTTCATCTGTCAATCATGTTACACTCAACTGGAGAAAACTCACCAGTTTCAGATGCAAATAGAGAATTCTGACAAAAGACTGCGACGCTATTTTCAGCAATTATTAACTTCTGACGAACCAATCAAAACTGAATGTTCTGTTCAACCACCAGAAAATCATTCAAGTTTTAGCACTAATAAAGTTGTCGTGAAATGTGAATCTGTCGAGTTTCATGATGGTTTTGATGTAGATCTTGGTTGTAAAGAGAACGACTCTGCAATTTTCAGTGAAGAAAATAAACATAacgaagaaatttttttaaaatccgaaatcaaagacgaaccgaTGGATGACAGTTTATTAATTCTGACAGAATCAGTCGACGATACTGTAAACGCATCATTAAACGCCAATGAAAATGAAATTAGCTGCGAGGATACGAAAATTAATATTAGCCACGCATCAGAGGTTTCGTGTTTACCTTTTGCAAATGTGACTGAAAATGTCAGCAAATTAAATAAGCACAAgcgaatacatactggtgagaaaccttatcagtgtgaccgtTGTAGTAAGTGTTTCTCTGActtatgcaatttaaataaacataagcGTATACATACGGGTgaaaaaccttatcagtgtgacctctGTAATAAGTCTTTCTCCCAGTCAATCCATTTAAATGAACACAGgcgcatacatactggtgagaaaccttttcAGTGTGATCTTTGTAATAAGTCTTTCTCTCAGTCAAGCCATTTATATAAACACAAGCGTACACATACTggggagaaaccttatcagtgtgacgtttgtaaaaagtgtttttctcaCTCATTCAGTTTAAATCAACACAAGCGTattcatactggtgaaaaaccttatcagtgtgacatttgtaataagtgtttcactcagtcaaACAGCTTAAATATACACAAGCGTGTACATTag
Protein Sequence
MEQISIIGSDLGSMCRLCLSRGVVLFDVFRISPKMKNSVAGVIMKCAAVQITRGDGMPNFICQSCYTQLEKTHQFQMQIENSDKTLRRYFQQLFASDKQIKTESSVQPSENHLILNSNKDIVKCESLELHDEFDIDLGWKENDPAIFSEENKHNEEILLKSEIKDEQMDDSLLILTEPVGDTVNASLNTNENEISCEDMKINISLASEISCLRSANVTENFSKCDETNENLSAYRQKHKEANKLKSYKCDICNKCFSGYSSFYYHRRVHTGEKPYQCDICNKYFSSSFSLIVHKRVHTGVKPHQCDLCNKFFSQLKHLNVHKRIHTGEKPYQCDLCNKSFSQAGSLYNHKRIHTGEKPYQCNHCTKYFSCSSDLSKHKRIHTGEKPYQCDLCNKCFSQSSSLNIHKRIHTGVKPYQCDRCSKCFCDLGSLNRHKRIHTGVCPIEDVEEDGDYPNDEIEQKFDVYPAFQMGINLPIDISPLVEVDFDTPGPSKKTRRMKPISIIGSDLGSMCRLCLSKGVALFDVFKISPKMKNSVAGVIMKCAAVQITRGDGMPKFICQSCYTQLEKTHQFQMQIENSDRTLRRYFQQTNKKPIKTESSVQPSENHLIFNTNKDVVKCESVEFQDGSDLNLGWKENDPAIFSEENKHNEEIFIKSEIKDEPMDDNLLFLTESVDDTVNASFFANENEDNCEDSKINIGHASEISCLRSATVTENFKSVDDSDLDWKESEPANFIQENKNVDKISLKFEIKDEQMDDSLLILTDSVDGMVNVSSNDDGNEIVCEDTKINIGHVSEISCLRSVNVTENFNKMKQISIIASSLSSMCRLCLSRGVILFDVFRISHKMNSVAGVIMKCAAVQITRGDGMPNFICESCCTQLEKTHQFLMQIENSDKTLRRYFQQLFTSDEPIKTECSVQPSGSHLILNSNKDIVKSESLQLHDEFDIDLGLKESEAANFIQENKNIDGITLDSEIKDEQMDDNLLILTESVDDSDLDWKESEAANFIQENKNIDVITLNSEIKDEQMDDNLLILTESVDDSDLDWKESEPANFIQENKNIDGISLKSEIKDEQMDDSILILTDSVDSRANLSSNDDGHEIVCEDTKINIVSEISCLRSANVTENFSKCDETNENLSAYRQKHKEANKLKSYKCDICNKCFSGYSTFFYHRRVHSGEKPYQCDVCNKCVSSSFSLTVHKRVHTGVNAHQCDLCNKFFSQLKHLNEHKRTHTGEKPYQCDLCNKSFSQSGSLNIHKRIHTGEKPYQCDICNKCFSFLGNLIRHNRIHTGITRGDGMPNFICQSCYTQLEKTHQFQMQIENSDKRLRRYFQQLLTSDEPIKTECSVQPPENHSSFSTNKVVVKCESVEFHDGFDVDLGCKENDSAIFSEENKHNEEIFLKSEIKDEPMDDSLLILTESVDDTVNASLNANENEISCEDTKINISHASEVSCLPFANVTENVSKLNKHKRIHTGEKPYQCDRCSKCFSDLCNLNKHKRIHTGEKPYQCDLCNKSFSQSIHLNEHRRIHTGEKPFQCDLCNKSFSQSSHLYKHKRTHTGEKPYQCDVCKKCFSHSFSLNQHKRIHTGEKPYQCDICNKCFTQSNSLNIHKRVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-