Xxan022529.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754475.1:16702986-16710416[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 6.2e-05 0.0013 19.6 4.9 1 23 297 319 297 319 0.99
2 17 0.00011 0.0023 18.8 4.6 1 21 569 589 569 590 0.96
3 17 0.0076 0.16 13.0 0.2 2 23 598 619 597 619 0.97
4 17 7.6e-06 0.00016 22.5 1.8 1 23 625 647 625 647 0.98
5 17 0.00017 0.0034 18.2 4.9 1 23 653 675 653 675 0.98
6 17 0.00011 0.0022 18.9 2.1 1 23 681 703 681 703 0.99
7 17 2.5e-06 5e-05 24.0 3.2 1 23 709 731 709 731 0.99
8 17 9.6e-07 2e-05 25.3 6.1 1 23 737 759 737 759 0.99
9 17 4.5e-05 0.00093 20.0 2.9 1 23 765 787 765 787 0.98
10 17 6.3e-06 0.00013 22.7 1.8 1 23 862 884 862 884 0.99
11 17 1.5e-05 0.00032 21.5 3.0 1 23 890 912 890 912 0.99
12 17 0.00025 0.0051 17.7 3.8 1 23 918 940 918 940 0.98
13 17 0.00014 0.0029 18.5 1.4 1 23 946 968 946 968 0.98
14 17 0.025 0.5 11.4 3.7 1 23 974 996 974 996 0.99
15 17 2.5e-05 0.00051 20.9 3.9 1 23 1002 1024 1002 1024 0.99
16 17 2.9e-06 5.9e-05 23.8 2.9 1 23 1030 1052 1030 1052 0.99
17 17 0.00085 0.017 16.0 5.9 1 23 1058 1080 1058 1080 0.97

Sequence Information

Coding Sequence
ATGACGAGTGGACGAATTGACGCTATGAAAGAAATATCGATTACGGGCTCTGGATTAAgtacaatgtgtcgattgtgcttatcgAATGGTGTTGTGCTGTTAGACATGTTTTCGTTTTCACCGAAAATAACAAATAGCGTGGTTGGTGTTGTCATGAAATGTACTTCTGTTCATATAAATAGAGGCGATGGAATGCCGAATTTCGTCTGCCAATCATGTTGCACTCAACTGGAGAAAACTCACCAGTTTTTGATGCAAATAGAACAGTCTGACAGAACACTCCGACGTTATATTCAACAATTAAACGCTTCTCAGAAACCAATCAAAGCTAAACGTCCTGTTCAACTATCTGAGGAGTCTTTGTTCCATAACGCTGTTAAATGTGAATCTTTAGACCTCAACGAAGAGTTTGAAATAGATCTTAATTCAAAAAATACCGTAACTGAACATTTTAATcaagacaataaaaataacgaGGAATTGAgtttgaaatctgaaatcaaagtcGAACTGATTAATGATAATTTATCTTTAACGACAGACTGTGAAACTGACCCATTAGACATTTCGTCCAATATAGATGGCAAAGAAATCAGCTGTGAAGACTCAAAGATTGACATAGGAGAGACAAAAGTGAACGTAGACATTGCGGGCAATTTGGAGGAGAAAAAACAGGAAAACAATATGTCTCTAAAATCCGAACTGGAATTCGAACAGAtagatgataatttattaattctaccaTCTAACGACGATGGAAATGAAACTAGCTGCGAAGATACGAAGATTAATATTGCAAACGTAACAGAAAATTTCAGTAAGTGtgatgaaagaaaaataaatatttttgtcaatcgTAAGCACAATCAAGACAATGAATTGAGATCGTATCAATGCGACATTTGCAGTAAATGCTTCTCTAGCCGTTCGGGTTTATATTATCATAAACGAACACATCCTGCTGAgagaccttatcagtgtgacatttGTGTAACGATGCTTGATCTGTTTCGGTTTTCAACTAGAGTTAAAGACAAAATTGCTGATATGATAATGAAGTGTGCTCCTGTACAGATACTGAGAAACGACGAGATGCCGAAATTCGTTTGTCAATTATGTTTTACTCGACTGGAGGAAATGCATCAgttccaaataaaaataatacagtctGACAAAACACTACGACGCTATTTACAGCAACTGCATGCTTCTGATAAAGAACGCCTGATCGAGAGTTCTATTCAGAGGTCAAATGATTCTTCAATCGTTAATACTAATGCAGACATCGAGTATGATTCTTCAGAACTCCATGACGTGTTTGACTTGAATGTCAACTGGAGAGAAAAAGAGTGTGAGAACTTTAGTTCGGAAAGCAAAAATAACGataaaatgtctttaaaatacGAAATAAAAGTAGAACAAATAGACAAGAATGCAATAACTCTACCAGACTGTGCTGATGATCCCTTAGACATTTGGTCTAAAGGTGATGAGTTCACTGATATCAATATTGGCGAGAGGAATATGGAAACAACTTTGAATTTTAACTCAACATGCAAAAGCATTGATATTAAACCCGAAATCAAAAACGAACCGATAGATGATGAATTGTTAATAAATACAGAAAATGTTTCATCTAACAATTATGACAGTGAAATCAACAATGAAAACATGAAGTCTGATATTGACCACATTTCTGGAAACTATTCCTGTAACacttgtaataagtgtttcgttAATTCAGATGATCTTAAAAATCATATGTGTAATGACACTGGAGAGAAAATGATTCAATGTGAGATTTGTAATAGGTTTATCTCCGgctatgaaaatttgattaaacacaaacgtatacataccgacgctaaaccatatcagtgtgatatATGTGATAAGTCTTTTGCGCGAAAAGCTTATTTAATTGACCACAAACATACGCATACTGGGGAAAAACCACATCAATGTAAAGTTTGTAATAAGTGCTTCGCTCTTGctgatagtttgaaaaaacataaaCGTGTGCATACAGGAAAAAAATCGTAtcgatgtgacatttgtaataagtgcttCGCTCTTGCTGATAGTTGGAAAAAACACAAACGtgtacatacaggagagaaaccatatgaatgtgacatttgtaagaagtgtttcgcAACAAGTTCGGATTTAGTTCGTCACAAACGTAagcatactggagagaaacgtTATCAATGccacatttgtaataaatgtttcattcaGTCATCTAGTTTAAAAAGTCATATGCGTttacatactggagagaaaccgtaccaatgtgacgtttgtgatAAATGTTTCACACATGCAGCTAGCTTAAGTTGGCACAAACTTTCCCATGCTgtagaaaaaacaaattataccgCCGAGTGTAAAGCGGAAGCACCTGCCAATTTTGAATCGGAAACCAAAAGTATTGaggaaatatatataaaatccgaaatcaaagacACGCCGACGTATAATGAATCAATAATTCAAACAGAATCAACTGTGGACACACAAAATACTAGATCCAACGATTGCGGTAGTGAAATCAACAATGATGACATATAtaaaccgtatcagtgtaacctttgtaataagtgtttcgctCGTGCGGATggtttgaaaattcacaaacgtgtgcatacaggagagaaaccatatcgatgtgacatttgtaataagtgtttcgctCGTGCTGATCGTTTGAAAAATCACAAGCGTgtgcatacaggagagaaaccgtataactgtgacatttgtaataaatctTTCGCTTTTTCTGGTTGTTTGAAAAAACACAAACGTttgcatacaggagagaaaccgtatcgaTGTGACATTTGTGATAAGTGCTTCGCTCTTGCTGATAGTtggaaaaaacacaaaaatgtacatacaggagagaaaccatatcaatgtgacatttgtatgAAGTGTTTCGCTTTAGATTCGACTTTGAAATATCACAAACGTACACATTCTGGTGAGAAATCGTATCGGTGTGACGTGTGTGATAGGTGTTTCACACAGCCAGGACATTTAGTTCTTCACAAACGTAGGCATACTGGAGACAGACGTTATCAATGCCACATTTGTAATAAAAGTTTCATTGAGTCATATAGCTTGAAACTTCATATGCGTctacatactggagagaaaccgcACCAATGTGACGTGtgtgaaaaatgttttacacATGCAGCTAGCTTAAGACAACACAAACTTTCCCATGCTGGAAAAAAACCAAATGAGTATTCAGATATCGATGTTGGCGAAATTAAAGTGGAAGCAGCTGCCAATTTTGAACCGAAAACCAAAAGTATTGATGAAACAAATTTAGAAGTTGAAATCAAAGACACGCCgatatattatgattattaa
Protein Sequence
MTSGRIDAMKEISITGSGLSTMCRLCLSNGVVLLDMFSFSPKITNSVVGVVMKCTSVHINRGDGMPNFVCQSCCTQLEKTHQFLMQIEQSDRTLRRYIQQLNASQKPIKAKRPVQLSEESLFHNAVKCESLDLNEEFEIDLNSKNTVTEHFNQDNKNNEELSLKSEIKVELINDNLSLTTDCETDPLDISSNIDGKEISCEDSKIDIGETKVNVDIAGNLEEKKQENNMSLKSELEFEQIDDNLLILPSNDDGNETSCEDTKINIANVTENFSKCDERKINIFVNRKHNQDNELRSYQCDICSKCFSSRSGLYYHKRTHPAERPYQCDICVTMLDLFRFSTRVKDKIADMIMKCAPVQILRNDEMPKFVCQLCFTRLEEMHQFQIKIIQSDKTLRRYLQQLHASDKERLIESSIQRSNDSSIVNTNADIEYDSSELHDVFDLNVNWREKECENFSSESKNNDKMSLKYEIKVEQIDKNAITLPDCADDPLDIWSKGDEFTDINIGERNMETTLNFNSTCKSIDIKPEIKNEPIDDELLINTENVSSNNYDSEINNENMKSDIDHISGNYSCNTCNKCFVNSDDLKNHMCNDTGEKMIQCEICNRFISGYENLIKHKRIHTDAKPYQCDICDKSFARKAYLIDHKHTHTGEKPHQCKVCNKCFALADSLKKHKRVHTGKKSYRCDICNKCFALADSWKKHKRVHTGEKPYECDICKKCFATSSDLVRHKRKHTGEKRYQCHICNKCFIQSSSLKSHMRLHTGEKPYQCDVCDKCFTHAASLSWHKLSHAVEKTNYTAECKAEAPANFESETKSIEEIYIKSEIKDTPTYNESIIQTESTVDTQNTRSNDCGSEINNDDIYKPYQCNLCNKCFARADGLKIHKRVHTGEKPYRCDICNKCFARADRLKNHKRVHTGEKPYNCDICNKSFAFSGCLKKHKRLHTGEKPYRCDICDKCFALADSWKKHKNVHTGEKPYQCDICMKCFALDSTLKYHKRTHSGEKSYRCDVCDRCFTQPGHLVLHKRRHTGDRRYQCHICNKSFIESYSLKLHMRLHTGEKPHQCDVCEKCFTHAASLRQHKLSHAGKKPNEYSDIDVGEIKVEAAANFEPKTKSIDETNLEVEIKDTPIYYDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-