Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754475.1:20352774-20357504[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.041 0.84 10.7 3.6 1 23 269 293 269 293 0.98

2 20 0.0023 0.048 14.6 1.7 1 23 299 323 299 323 0.96

3 20 1.3e-06 2.6e-05 24.9 3.6 1 23 329 351 329 351 0.99

4 20 0.029 0.59 11.2 3.3 1 23 711 734 711 734 0.96

5 20 9.5e-06 0.00019 22.2 3.6 1 23 738 761 738 761 0.97

6 20 1.3e-05 0.00027 21.7 3.2 2 23 891 913 890 913 0.96

7 20 6.2e-06 0.00013 22.7 1.2 1 23 918 941 918 941 0.98

8 20 2.5e-05 0.00052 20.8 3.4 1 23 1044 1067 1044 1067 0.94

9 20 3e-05 0.00061 20.6 1.4 1 23 1076 1099 1076 1099 0.98

10 20 0.83 17 6.6 1.2 1 23 1110 1132 1110 1132 0.93

11 20 0.0001 0.002 19.0 1.0 2 23 1144 1165 1143 1165 0.97

12 20 0.00024 0.0049 17.8 3.6 1 23 1172 1194 1172 1194 0.98

13 20 1.2 24 6.2 0.1 2 23 1202 1221 1202 1221 0.89

14 20 0.00011 0.0022 18.8 2.8 1 23 1227 1249 1227 1249 0.97

15 20 0.0011 0.023 15.6 0.5 2 23 1255 1277 1254 1277 0.89

16 20 0.01 0.21 12.6 1.8 1 23 1282 1305 1282 1305 0.98

17 20 0.00015 0.0031 18.4 1.2 1 23 1311 1334 1311 1334 0.96

18 20 5.3e-06 0.00011 23.0 3.0 1 23 1340 1362 1340 1362 0.98

19 20 2e-07 4e-06 27.5 1.4 1 23 1368 1391 1368 1391 0.98

20 20 0.00089 0.018 16.0 1.7 1 23 1397 1420 1397 1420 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.041	0.84	10.7	3.6	1	23	269	293	269	293	0.98
2	20	0.0023	0.048	14.6	1.7	1	23	299	323	299	323	0.96
3	20	1.3e-06	2.6e-05	24.9	3.6	1	23	329	351	329	351	0.99
4	20	0.029	0.59	11.2	3.3	1	23	711	734	711	734	0.96
5	20	9.5e-06	0.00019	22.2	3.6	1	23	738	761	738	761	0.97
6	20	1.3e-05	0.00027	21.7	3.2	2	23	891	913	890	913	0.96
7	20	6.2e-06	0.00013	22.7	1.2	1	23	918	941	918	941	0.98
8	20	2.5e-05	0.00052	20.8	3.4	1	23	1044	1067	1044	1067	0.94
9	20	3e-05	0.00061	20.6	1.4	1	23	1076	1099	1076	1099	0.98
10	20	0.83	17	6.6	1.2	1	23	1110	1132	1110	1132	0.93
11	20	0.0001	0.002	19.0	1.0	2	23	1144	1165	1143	1165	0.97
12	20	0.00024	0.0049	17.8	3.6	1	23	1172	1194	1172	1194	0.98
13	20	1.2	24	6.2	0.1	2	23	1202	1221	1202	1221	0.89
14	20	0.00011	0.0022	18.8	2.8	1	23	1227	1249	1227	1249	0.97
15	20	0.0011	0.023	15.6	0.5	2	23	1255	1277	1254	1277	0.89
16	20	0.01	0.21	12.6	1.8	1	23	1282	1305	1282	1305	0.98
17	20	0.00015	0.0031	18.4	1.2	1	23	1311	1334	1311	1334	0.96
18	20	5.3e-06	0.00011	23.0	3.0	1	23	1340	1362	1340	1362	0.98
19	20	2e-07	4e-06	27.5	1.4	1	23	1368	1391	1368	1391	0.98
20	20	0.00089	0.018	16.0	1.7	1	23	1397	1420	1397	1420	0.97

Sequence Information

Coding Sequence: ATGGAAAAGCAACTAGTAATTCAAGCAGAAGGGTTAAAAGATGATATGTGTCGATTCTGTTTAGCAATGGATGTTAAATTGGCGCATGTTTATAGCGGTTCAAGCAATCTTGGATGTACAATAGCTGAAGCAGCCATGGAGTGCGCCACTATACAGATTTCACTGAATGATGGCTTGCCACTGTACGTCTGCAAAGATTGTTTTTTGAAACTACAAGACGTtcgacaatttaaaaaaatggtcctCAAATCCGACGCCGTGTTAAGAACTTATCTCAAACAGCTGCGTATTGACCGCCACTCAACAAGAAGCAGTTTTCCCATAAAGGATGACCCTTTTGACCTTGACGAGGCACGGTGTACGGATCAAAATGACGACAAAATGAAGACTGAAGACACCGACAATAATATCACGGTATCAACGACGTTGGAAGACATCACTTCTAATTCCGCGGAAAATATCAATTTAGTAGATTATAGTTCCattgaaaaattaagttcatccatttcagaaaaaaacagaTCAGATGCACAAAGCGAATTCGAAAATAGAAATCTCATAGATAGTGAaataatagacgctgatgaatCTGATAATCGAGAAATAAGTGGAACTACTTCTGACTATGTTGTAGAAATGGATGCAACAAGTTGTGAGACAGAAGATGATGCAGACAATAGTGAAATAGAGGAATTGGGGTCAAGTGAAGGTTCCGAACAACAAACGCATGACGGTTTACAGAAAGTTAAAGTGAAAAAAGTAGCCTTCAGTGAAGGAGACAGGCATTCAGATCGTAAAAAGCAGCACAAATGTCACATGCCAGGATGCAGCAAAGTTTACGGGAAAGAATCGCATCTTGGGGTTCATTTAAGGCGGCACACCGGAGAAAAACCCTTTGTATGCGATTGGCCGTTCTGCAGTAAAGATTTCACCAGCTCCAATGCATTGCATAGACATCAGAAATCTCATACTGGAGAAACACAATTTCAATGTCCCGAATGCGATAAGAAGTTTATGCGTAGGGATCATTTATCAAAACACATTAAAACTCATACGAAACAAAAGACAATGGAGGCAGCTACATCAACTCAACCTGCTTCTTTAGACACTTCTGGTGGCGCTGAAAAAATGTTGATCACTATTACTACAGAAACTGACCAATCGGATTTAACTATTGCCGATGGTTTAGAATCTTCGATATTGAGTTGTATCAAGCCTTTACCGAAATCCACTGATGGGGTTTGTGAAACGCCTACTGTTTTTGAAACGCCTGTAGAAAAAggcataagtaataaaaataatactcaAGCAAATACCATAAAAGTTAATGAATCTTTGAGCGAGCGAATTGATAGCGTAATTTCAACCAATGAAAAAGTTTTATCAGCCAATTTCCATACAGGAAATAATGCTACATCTAGTTTAAAATCTGACCAGCAAGGAAGAACCAACTTAGAGTCGGCTGAACAAAGTTTAGAAGCAGAAAGCGACGAAATTTTGGGAAATACTAACATTATAGAGTGTGAAAAAATAGATAGTAATAAATCCAATGATCACGAAACAAGTGGGAATATTTCGGATAATTCTTCAGTATCGGACCATACCGATGACTGGGTGTTAGAAGAAGATTCCACTTCTGAAACAGAAGAAGGCTCTGCTTCTGAAACAGAGGAAGATTCCGGTTCTTCTGACGATGCCGCTGAGAATAAatttaagaataataaaaaaaacaatttaaaacgtAAAATATCCGAAGAAACCTTTTCTAGAAAACGTGTTTTACGTGGACATACAAAGCGTACACCAAACgaacaagaaaaaattaattcttcaAAGGAAAATGAGAACTTATTGATTAGTAATGCAGTTGAAAAACTAATTTCCGCCAATTCAGAGAATCACAATTTGGACGTGCAAACCAATGAACCTTTAGAGAATTCGAATATCGCAGATCTTGacatattaaatactaataaACGCAGCGATCAAGAAAAATCTCGATATTCTTCGAACGATAACACTTTGGACAATGCTGTAGAAAGGGATTATGTTGACGCTTTACATTCAGAAGAAGTGGGGTCGAAAGATGATACTTCTGAAAAGAAATCTGGCAAAGATGAAAACACCGATTTCAAATGTATCATATGTAAAAAATTGTATACGAGTAAAGATAGTTTAtgtaaacatattttgaaagaacataaaaatatgtttcagtGTGAAATATGCAAAAAAAGCTTTACTTCAAAATCTGGTTTATGTAGACATGCGAAAAAAATTCATGGTTCAGCTACAAACGAAAATAAATCAACGTCAAACGAACAAGAAACGTCAAGTAAATTAGATTCCTCGAAGGAAAATGATAACTCGATAAACAGTAAGCCGGCTAACAAGTTAACTTTTACCAGTTCAGCTAGCCAGAGTTTGGAAACACAAAGCGAAGAGTTTTTGGAGAAAACAAATCATGAAAATATATCGGACGCTAAAAAACGCAAGGGTCGAGAAAAAAGTGGAAGTTCTACGAGAGATCATGTTTCAGAAAGTGCGGTAGAAGTCGGCGTAACAAACTCTTTGATAGAGGATAATATTGACGACCGGCAAGCAGAAGAAGTGGACCCGACAGATGATAATTCCGAAAAGGAAtctgagaaaaataaaaacccatttttaaaatgtaaaatatgtaagaAATTCTTTAAAAGGAGAGATAGTTTACGTAGACATATTTTCAcagtacataaaaataaacattttaagtgTCAAATGTGCGAGAAAAGCTTTGCTCGCAAAGATGGTTTGAATagacatgtaaaaaaaattcatggctCAGCTGAGCAATCTATAAACGAAAATAAATCAACGTCAAACAAACAAGAAATATCAAGTGAATTAGAAAAAATGAACTCCTCGAAGGAAAATGACAATTCGATAAACAGTAAATCGGCTAACCAGAGTTTGAAAACGCAGAGCGAAAAGTCTTTAGAAAAAACAAATCAGGAAAATATATCGGACGCTAAAAAACGCAAGGATGATTTTGAAGAAGATGATTTTGACAACTGGCATTCAGAAAAAGAGGGGTCGGAAGAAGATAGTTCTGAAAACGAATCTTACGAGAATAAAAGAATCGATTTCAAAtgtgaaatatgtaaaaaatcctATGCTACCAAAGATAATTTACGAAGACATCATTTGGAAAAACATGGAAGCAATTTAACAAAAGATGAATTTAAGTGTGAAAAATGCGAAAAAAACTATGTTCGAAAAGAGAGTTTACTTAGACATATGACAACAGTCCatgaatcaaataaaaatgaGAAAGAAGTCGACTACAGCTGCAATACTTGTAATGAAAAATTTGATGAATATCGCGAATTTTACATCCATGAAGTCAGACACTTCGATAAGAATTACCAACCGGGCAAACCTATTCAATGCAATGCGTGCGGGAAGTTGTTTAAGAGACTATCTAAATTAAAAGAGCATATCAGGAGACATGACGACGACGATAGACCTTTTCAATGCACTAAATGTGTTAAAAAATTCAAGACTAAAAACGACTTAGCAAGTCACCAACGGTTCCACAGCGACATTGCAGTATGCCCTGTATGTCCCGTTTGTGGAAAAGCTGTGAAATATAACATGAGTCAACATATAGAAAAACATTCAAAAAGCAAAAATTTCATGTGTCCGAAATGTGGCAAAAAGTTCAAAACTTTGTTCTTCTTAAAACGGCATAAAGAAATTCACGATGGAGAAATGATGGAATGTAAAATTTGCAACAAAAGTTTTAAAGGGAAAACAGCATTAAATGCACATAATATAAATAGTCACCACGGAAaagaatttaaatgtaagatttgttttaaaatttccagTTCGAAGCAAACTTTAAGCATTCACAATAGAACAGTTCACGAAAAAAAACGTACGTTTGATTGTTCtgaatgtaaaaaaacattttcttcttCAGAGGGTTTAAGGTTGCATAAAAAATCAGTTCATAGCAAAGCTAAACCTTTTGAATGTCAAGAATGCGGTAAATGTTTCACTCGTAAGGATTTCTTGGTTATGCACCTAAGGATGCACAGCGGGGAGAAGCCCTACAAGTGTGACGAGTGCGATAAACGTTTTTCACGAAATGACAATCTCAAAATACATTTAAAGAAAGTCCATGGCAAGTCTACGAAATACAAATGTCAAGTTTGCGACAagaaattcaaaatgaaacgtAAATTAGATAGTCACATCGAAGTTCGCCATAATGTGCCTATGTAa
Protein Sequence: MEKQLVIQAEGLKDDMCRFCLAMDVKLAHVYSGSSNLGCTIAEAAMECATIQISLNDGLPLYVCKDCFLKLQDVRQFKKMVLKSDAVLRTYLKQLRIDRHSTRSSFPIKDDPFDLDEARCTDQNDDKMKTEDTDNNITVSTTLEDITSNSAENINLVDYSSIEKLSSSISEKNRSDAQSEFENRNLIDSEIIDADESDNREISGTTSDYVVEMDATSCETEDDADNSEIEELGSSEGSEQQTHDGLQKVKVKKVAFSEGDRHSDRKKQHKCHMPGCSKVYGKESHLGVHLRRHTGEKPFVCDWPFCSKDFTSSNALHRHQKSHTGETQFQCPECDKKFMRRDHLSKHIKTHTKQKTMEAATSTQPASLDTSGGAEKMLITITTETDQSDLTIADGLESSILSCIKPLPKSTDGVCETPTVFETPVEKGISNKNNTQANTIKVNESLSERIDSVISTNEKVLSANFHTGNNATSSLKSDQQGRTNLESAEQSLEAESDEILGNTNIIECEKIDSNKSNDHETSGNISDNSSVSDHTDDWVLEEDSTSETEEGSASETEEDSGSSDDAAENKFKNNKKNNLKRKISEETFSRKRVLRGHTKRTPNEQEKINSSKENENLLISNAVEKLISANSENHNLDVQTNEPLENSNIADLDILNTNKRSDQEKSRYSSNDNTLDNAVERDYVDALHSEEVGSKDDTSEKKSGKDENTDFKCIICKKLYTSKDSLCKHILKEHKNMFQCEICKKSFTSKSGLCRHAKKIHGSATNENKSTSNEQETSSKLDSSKENDNSINSKPANKLTFTSSASQSLETQSEEFLEKTNHENISDAKKRKGREKSGSSTRDHVSESAVEVGVTNSLIEDNIDDRQAEEVDPTDDNSEKESEKNKNPFLKCKICKKFFKRRDSLRRHIFTVHKNKHFKCQMCEKSFARKDGLNRHVKKIHGSAEQSINENKSTSNKQEISSELEKMNSSKENDNSINSKSANQSLKTQSEKSLEKTNQENISDAKKRKDDFEEDDFDNWHSEKEGSEEDSSENESYENKRIDFKCEICKKSYATKDNLRRHHLEKHGSNLTKDEFKCEKCEKNYVRKESLLRHMTTVHESNKNEKEVDYSCNTCNEKFDEYREFYIHEVRHFDKNYQPGKPIQCNACGKLFKRLSKLKEHIRRHDDDDRPFQCTKCVKKFKTKNDLASHQRFHSDIAVCPVCPVCGKAVKYNMSQHIEKHSKSKNFMCPKCGKKFKTLFFLKRHKEIHDGEMMECKICNKSFKGKTALNAHNINSHHGKEFKCKICFKISSSKQTLSIHNRTVHEKKRTFDCSECKKTFSSSEGLRLHKKSVHSKAKPFECQECGKCFTRKDFLVMHLRMHSGEKPYKCDECDKRFSRNDNLKIHLKKVHGKSTKYKCQVCDKKFKMKRKLDSHIEVRHNVPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -