Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754467.1:37514976-37520547[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.6e-05 0.0018 19.2 1.5 1 23 442 464 442 464 0.97

2 18 0.0015 0.031 15.2 0.7 1 23 470 492 470 492 0.96

3 18 5.4e-05 0.0011 19.8 0.7 1 23 498 520 498 520 0.99

4 18 0.00016 0.0033 18.3 3.5 1 21 526 546 526 548 0.94

5 18 0.00013 0.0027 18.6 4.6 1 23 554 576 554 576 0.99

6 18 0.00013 0.0026 18.6 5.3 1 23 582 604 582 604 0.97

7 18 2.1e-05 0.00043 21.1 7.2 1 23 610 632 610 632 0.97

8 18 4.9e-07 1e-05 26.2 2.7 1 23 638 660 638 660 0.98

9 18 0.00036 0.0074 17.2 6.7 1 23 666 688 666 688 0.97

10 18 4.1e-05 0.00084 20.2 5.6 1 23 694 716 694 716 0.97

11 18 2.3e-06 4.7e-05 24.1 2.8 1 23 722 744 722 744 0.98

12 18 3.3e-05 0.00067 20.5 7.9 1 23 750 772 750 772 0.98

13 18 1.7e-05 0.00034 21.4 6.7 1 23 778 800 778 800 0.98

14 18 8.4e-05 0.0017 19.2 7.7 1 23 806 828 806 828 0.98

15 18 2.1e-05 0.00043 21.1 7.2 1 23 834 856 834 856 0.97

16 18 0.00056 0.012 16.6 0.4 1 23 862 884 862 884 0.97

17 18 0.16 3.3 8.9 4.5 1 23 894 916 894 916 0.98

18 18 8.9e-06 0.00018 22.3 1.7 1 23 922 944 922 944 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.6e-05	0.0018	19.2	1.5	1	23	442	464	442	464	0.97
2	18	0.0015	0.031	15.2	0.7	1	23	470	492	470	492	0.96
3	18	5.4e-05	0.0011	19.8	0.7	1	23	498	520	498	520	0.99
4	18	0.00016	0.0033	18.3	3.5	1	21	526	546	526	548	0.94
5	18	0.00013	0.0027	18.6	4.6	1	23	554	576	554	576	0.99
6	18	0.00013	0.0026	18.6	5.3	1	23	582	604	582	604	0.97
7	18	2.1e-05	0.00043	21.1	7.2	1	23	610	632	610	632	0.97
8	18	4.9e-07	1e-05	26.2	2.7	1	23	638	660	638	660	0.98
9	18	0.00036	0.0074	17.2	6.7	1	23	666	688	666	688	0.97
10	18	4.1e-05	0.00084	20.2	5.6	1	23	694	716	694	716	0.97
11	18	2.3e-06	4.7e-05	24.1	2.8	1	23	722	744	722	744	0.98
12	18	3.3e-05	0.00067	20.5	7.9	1	23	750	772	750	772	0.98
13	18	1.7e-05	0.00034	21.4	6.7	1	23	778	800	778	800	0.98
14	18	8.4e-05	0.0017	19.2	7.7	1	23	806	828	806	828	0.98
15	18	2.1e-05	0.00043	21.1	7.2	1	23	834	856	834	856	0.97
16	18	0.00056	0.012	16.6	0.4	1	23	862	884	862	884	0.97
17	18	0.16	3.3	8.9	4.5	1	23	894	916	894	916	0.98
18	18	8.9e-06	0.00018	22.3	1.7	1	23	922	944	922	944	0.97

Sequence Information

Coding Sequence: ATGAATTCAGGGGACCAACACAATTTGGCCCCAACTTCGGGAGCTTCGTCAGTTCCAATTACGTCATCTGagGATGCAAATCAAAGATCGCATCAGCAGAACACCCCCACAACAGTGCCGACTGATCTACGGGTAAATCCGACCGCTCTGAATGCAGTCGCTTTGTCGAGCGTGGCTAAATATTGGGTGCTGACTAATCTTTTACCCGGACCACTTCCACAAGTGTCCGTGTATGGTTTACCGACAACACCGCGAGTGGAAAGCAGTAAACCGGGACAGgaTGCCATGCTTCAGCAGCATTCTTCTTTATTACCAACCGACCCGCTACTTCTGCAACATCACAACGTAGCAGGTCTAAACTCCCAAATACCTGTAAGTATATCGACGACGCAGGGTGTGGCCAACATTTCCATACCTACGAGTGTTATGCAACATCAGGCCCATTTGGATTCGCAACAAGTGTCGCAACAGTCGAGCTCTCAACAGTTAACTGGCTCACAAAACGCCGTTCAGCAACAACAAAGCTCGCAGCATGTCTCGCAACACTCGCACCAACAGATGTCTAGACAGAGTCACGGTCCGAGTGGAAATAATGGAAACAACGCGTCGAACTCACAGCAGAGCATGGTTCAGGTGCAGGTTCAAGATAATTTGGTGTCCGTCATAGAAGAACAGAAAGAACAAAAAGTCGATACTTTAGCGttacaaaatcaaataaatcaACAGAACATCAATCACGAGAATAATCCGCAGCTGAACCAGCAACAGATGCAACACTTGCAGCAGTTACAAGTTCAGCAAGTGCTCGACAATGTCGATAATTCCGAGAGTGCCATAAACAACAGTAGTGATGCCGATCCGTTGCAAATTAAAGACGAAAAAGGCATACAGAACTGCGCCAAGTTGTTGTCGGGCACTCAGTTTAATTTGACTGACGTTAAAGGGAATTTTACGATGCCCGACATAAAGCCGGGTCACCATATGATGGACGTTCGAACGGCCGACGGCAGCATAGTCAAAATAGCTACGGGCGGAATACAGGACCAGGATTTAGCTAAATCGCTCGGCGTCGAAATGGTACAAAACATGTACAAAGTAAACGTCGAAGATATAAACCAGTTACTCGCTTACCACGAAGTATTCGGCAAACTTCAAAGTGAAATTGCAGTACAAGGCAACCAGGGGAATATTGTCACGAACGTTTCGGCCGGAAATGTCAACCTCCAAGGAACTCCCAATCTGAGTATGGTTAAAGATGGCGATCAGGAAGCGACGACCAGCACGCTAACAAACGAAAGTCCTCCCGCTGTAGTTACTGGAACTCACGTTTGCGATTTGTGCGGAAAAATGTTTCCGTTTAGATATCAGTTAATCGTACACAGGCGCTATCATACCGAACGTAAACCGTTCACTTGCCAAGTCTGCGGTAAGGCTTTTACGTGCGCAGCTGAATTGACGCGGCACGGTAAAGGTCATTTAGGGGGCAGCATGTACACGTGTGCCGTTTGTTTCCACGTGTTTGCGAATGCCGCTTCGCTAGAAAGGCACATGAAGCGCCATTCTACGGATAAACCTTATGCGTGCACGATCTGCGGCAAGTCCTTTGCTCGTAAAGAACACTTGGACAACCACACCAGATGTCACACCGGTGAAACACCGTATCGATGTCAATATTGTGCTAAAACTTTCACTCGGAAAGAACACATGGTCAACCATGTTCGTAAACATACCGGAGAGACGCCGCACCGTTGCGAAATATGTAAAAAGTCGTTCACTCGCAAGGAGCATTTCATGAACCACGTGATGTGGCATACGGGTGAGACGCCGCATCACTGTACAATATGCGGCAAGAAATACACGAGAAAGGAGCACTTGGCCAATCATATGCGCTCTCACACCAACGATACGCCGTTCCGTTGTGAAATTTGCGGCAAGTCGTTCACTAGAAAAGAACACTTTACGAATCACATTATGTGGCATACTGGAGAGACTCCGCATCGTTGTGATTTCTGTTCAAAGACGTTTACTCGCAAGGAACATCTTTTGAATCATGTCCGTCAGCACACCGGGGAATCGCCGCATCGATGCGGTTATTGTTCAAAATCGTTCACGAGAAAGGAACACTTGATAAATCACGTCAGGCAACATACGGGCGAAACGCCGTTCAGGTGTAGCTACTGTCCTAAAGCGTTCACGAGGAAAGATCATTTGGTAAACCATGTCAGGCAGCACACCGGGGAGTCCCCGCATAAATGTACGTATTGTACGAAGTCGTTCACCAGAAAAGAACATTTAACAAATCACGTTCGTCAACATACGGGCGAATCGCCGCATAGATGTCAGTATTGTTCGAAATCGTTCACGCGGAAAGAACATCTGACAAATCATGTTCGCATTCATACGGGCGAGTCGCCTCATCGCTGCGAGTTCTGTCAGAAGACGTTTACTCGCAAGGAACACTTGACGAATCATTTGAGGCAACATACGGGCGAGACCCCGCACTGTTGCAACGTGTGCAACAAACCGTTCACTCGAAAGGAGCATCTCATAAATCACATGCGGTCTCATACGGGAGAGCGTCCGTTCGCCTGTCAGGAATGCGGCAAGTCGTTCCCGTTGAAAGGAAACTTGTTGTTCCACCAGCGTTCGCACAACAAGGGACAGAATGCCGAGCGGCCGTTCCGTTGCGATCTGTGTCCGAAAGATTTTATGTGCAAGGGACATTTGGTTTCTCACAGGAGATCGCACAGCGGCGAACGGCCGCATTCGTGCCCGAACTGCGGCAAGACGTTCGTCGAGAAAGGCAACATGCTGAGGCATTTGAGAAAGCACAATGCCGATGCCCAACAAACGCAGACCGGTGCGCAGCAGACGACGACGACTACGGCGATACACGCGCCTCAACAACAGAACAACATCGTTCAACCGCAACCGAACGCCGGCGGCGCTTTGCAGATACCCCAAGTGACGACGCAAGCACAGCAAACTCTGACCCAGGCGCAGGTTTCACAGCAACAGGGCGTCATATCGCAGGCCGTGCCTCCTGCTGTTGGGCACATGCAGTTGCATCAGCAAGGAGCTCATCCGGTTGTCGTTCCCACACCTAACGGAAACGTCTTAGcgtcatattaa
Protein Sequence: MNSGDQHNLAPTSGASSVPITSSEDANQRSHQQNTPTTVPTDLRVNPTALNAVALSSVAKYWVLTNLLPGPLPQVSVYGLPTTPRVESSKPGQDAMLQQHSSLLPTDPLLLQHHNVAGLNSQIPVSISTTQGVANISIPTSVMQHQAHLDSQQVSQQSSSQQLTGSQNAVQQQQSSQHVSQHSHQQMSRQSHGPSGNNGNNASNSQQSMVQVQVQDNLVSVIEEQKEQKVDTLALQNQINQQNINHENNPQLNQQQMQHLQQLQVQQVLDNVDNSESAINNSSDADPLQIKDEKGIQNCAKLLSGTQFNLTDVKGNFTMPDIKPGHHMMDVRTADGSIVKIATGGIQDQDLAKSLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAVQGNQGNIVTNVSAGNVNLQGTPNLSMVKDGDQEATTSTLTNESPPAVVTGTHVCDLCGKMFPFRYQLIVHRRYHTERKPFTCQVCGKAFTCAAELTRHGKGHLGGSMYTCAVCFHVFANAASLERHMKRHSTDKPYACTICGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCSKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCQYCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCNKPFTRKEHLINHMRSHTGERPFACQECGKSFPLKGNLLFHQRSHNKGQNAERPFRCDLCPKDFMCKGHLVSHRRSHSGERPHSCPNCGKTFVEKGNMLRHLRKHNADAQQTQTGAQQTTTTTAIHAPQQQNNIVQPQPNAGGALQIPQVTTQAQQTLTQAQVSQQQGVISQAVPPAVGHMQLHQQGAHPVVVPTPNGNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01511032;
90% Identity: iTF_01511032;
80% Identity: -