Xxan022929.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754475.1:20445696-20457020[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0038 0.077 14.0 5.9 1 23 272 294 272 294 0.99
2 25 0.51 11 7.3 0.3 1 15 300 314 300 316 0.84
3 25 0.00036 0.0073 17.2 8.5 1 23 585 607 585 607 0.98
4 25 2.1e-05 0.00044 21.1 2.5 1 23 613 635 613 635 0.98
5 25 0.00016 0.0032 18.4 4.4 1 23 641 663 641 663 0.99
6 25 5.8e-06 0.00012 22.9 5.6 1 23 669 691 669 691 0.99
7 25 0.00087 0.018 16.0 8.8 1 23 697 719 697 719 0.97
8 25 3.1e-06 6.4e-05 23.7 0.8 1 23 725 747 725 747 0.99
9 25 5.5e-05 0.0011 19.8 4.3 1 23 753 775 753 775 0.99
10 25 2.1e-06 4.4e-05 24.2 0.9 1 23 781 803 781 803 0.99
11 25 0.0019 0.039 14.9 4.9 1 19 809 827 809 830 0.94
12 25 2.9 60 4.9 5.6 1 23 1080 1102 1080 1102 0.97
13 25 1.7e-05 0.00035 21.4 2.1 1 23 1108 1130 1108 1130 0.99
14 25 0.00068 0.014 16.3 9.4 1 23 1136 1158 1136 1158 0.98
15 25 4.3e-06 8.8e-05 23.3 1.2 1 23 1164 1186 1164 1186 0.99
16 25 1.2 24 6.2 3.7 1 23 1472 1494 1472 1494 0.91
17 25 0.00017 0.0034 18.3 1.2 2 23 1695 1716 1694 1716 0.97
18 25 0.0009 0.018 16.0 0.8 2 23 1775 1796 1774 1796 0.97
19 25 0.00022 0.0045 17.9 1.7 1 23 1802 1824 1802 1824 0.97
20 25 0.00052 0.011 16.7 4.9 1 23 1830 1852 1830 1852 0.98
21 25 1.1 22 6.3 4.0 1 23 1858 1880 1858 1880 0.98
22 25 5.6e-06 0.00011 22.9 1.5 1 23 1886 1908 1886 1908 0.96
23 25 0.00021 0.0044 17.9 2.0 1 23 1914 1936 1914 1936 0.96
24 25 3.2e-06 6.5e-05 23.7 0.9 1 23 1942 1964 1942 1964 0.99
25 25 4.2e-05 0.00086 20.1 1.2 1 23 1970 1992 1970 1992 0.98

Sequence Information

Coding Sequence
ATGGATGAAGTATCGGCAAATTTGTTCGATTTAAGTACAACGTGTAGATTGTGTTTGTCGAGAGGCGTTGCGACGTTAGATATATTTGCCTTTTCAAAAGCGATGAAGAACAAAGTAGCCGATGCCATTATGGAGTGTGCTCCGGTTCACATAACGAGATGCGATGAGCTGCCAAATTTAATCTGCAATTCATGCAACACACAACTGGAGAAAAGCCACCAGTTCCAGAAGCAAATAGTGCAGTCTGACCAGACACTGCGACGCTATCTACAACAACGTCGAACTACTAACAAACAAATCAAGGTTGAATGTTCCAATCAGGGACCGTCTGAAGTTTCTGTAATTCATAATACTAGTACAGATATCAAGATAAAACGCGAATCTTCAGAATTTCAAAACGTGTCTGATATAAATGTCAACTTGCAAGAAGATATACCTTCAAATTATACTTCAGTATACAAAAGAAACGAAGAAAtctatttgaaatctgaaattaaagaagAACCGATAGACGATTATTCATCAATTTCAACGGAATGCATTGATAACGCAATGGCTATTTTATCTGGGAGTGATGGCAGTAAAGCCAGCTGTAAAATTAAAGAAGAACCCACAGATGTTAATTCAATTACAATGGAATGCACTGCTAATTTAATAGACACTTCATCTAAGGGTGGCCAAGGAATTGAAGTCGAGCCAAAAAATTCAGAAATCGCACAACAATCGCATAACTGTACGCGCCGTCCTGatttaacagaaaattttacTAAACCTGAAGGTGGAGCCAAAAATATTCCGGGAATGCTTCAAAAATATAAGTGCGATCTTTGTAATAAACAGTTTAATTTTCTAAGTCATTTTAATATTCACAAACGTAGACATACTGGAGAGAAGTTATATCATTGTGaaatttgtaataagagtttcgcCGAATCAaTAAATTTTGACTCGAAGTGGAAgccaaaaattcacaaaatggaAGAAGTATCGGGAAATACGTTCGATTTAAGTACAACGTGTAGACTGTGTTTGTCAAAAGGCGTTGCGACGTTAGATATATTTGCATTTTCCACAGCAATGATGGACAAAGTAGTCAATGCCATTATGAAGTGTGCTCCGGTTCAGATAACGAGTAGCGATAAGATGCCAAATTTAATTTGCAATTCATGCAACACTCAACTGGAGAAAAGCCACCAGTTCCAGAAGCAAATAGTGCAGTCTGACCAGACACTGCAACATTATCTACAGCAACTACGAACTTCTAACAAACAAATCAGGGTTGAATGTTCCATTCAGGGGTCGTCTGAggattttttaattcataattcTAGTACAGATATCAAGATAAAACGCGAACCTTCAGAATTTCAAGACGTGTCTGATATTAATGTCAACTTACAAGAAGATATACCTTCAAATTATACTTCAGTATACAAAAGAAACGAGGAAAtctatttgaaatctgaaattaaagaagAACCGATAGACGATTATTCATCAATTCCAACGGAATGCATTGATAACTCAATGGCTATTTTATCTGGGAGTGATGGCAGTAAAGATAGCTGTAAAATTAAAGAAGAACCCACATATGTTAATTCAATTACAATGTTATGCACTGCTAATTTAATAGACACTTTATCTGAGGGGGGCCAAGGAATAGAAGTCGAGTCAAAAAATTCAGAAATCGAACAACAATCGCATAACTTCACGCCCCGTTCTGAATTAACagtgcatactggtgagaaaccatatcaatgtgacgtttgtaataagtgttttagCCAATCACAACATTTGAAAAATCACCAACACTTACATACTGATGaaaagccatatcagtgtgacgtttgtaaaaagggTTTCACTCGATCATttgatttgcaaaaacataagcgcctacatactggtgagaagccattccagtgtgacgtttgtaatatgtGTTTCAGAGAATCgcgttatttgaaaaaacatcagcgtgtacatactggtgagaagccgtatcaatgtgacgtttgcaataaatgtttcagtcaattggttcatttgaaaaaacaccaacgtatacatactggtgagaggccatatcaatgtgacgtttgtaataagtgttttagCCAATCACAACATTTGAAAAATCATCGACACTTACATACTGatgagaagccatatcagtgtgacgtttgtaaaaagggTTTCACTCGATCAATTGATTTGCAAAACCATCAgcgcatacatactggtgagaaaccataccagtgtgacgtttgtaatatgtGTTTCAGAGAATCAcgtaatttgaaaaaacatcagcgtctacatactggtgagacGCCCTATCGATGTGACgtatgtaataagagtttcagcgAATTAGGTAGTTTGAAAAGACATCAAcgtgtacatactggtgagaagccgtatcgatgtgacgtttgtaataagtgttttagCAAATCAGCTTCTTTGAAAAAACATAATTGCGTATatactgTAAATTCTGACTCGAAGTGGAAGACTAAAATTCACAAAATGGAAGAAGTATCGGCAAATACGTTTGATTTAAGTACAACGTGTAGACTGTGTTTGTCAAAAGGCGTTGCGACGTTAGATATATTTGCATTTTCCACAGCAATGACGGAAAAAGTAGCCAATGCCATTatgaagtgtgctccgattcagATAGCGAGATGCGATGAGATGCCAAATTTAATTTGCAATTCATGCAACACTCAACTGGAGAAAAGCCACAATTTCCAAAAACAAATAGTGCAGTCTGATCAAACACTACGAAGCTATCTACAACAACGTCGAACTACTTACAAACAAATCAAGGTTGAATGCTCCAATCAAGGACCGTCTGAAGTTTCTGTAATTCATAATACTAGTACAGATATCAAGATAAAACGTGAACCTTCAGAATTTCAAGACGTGTCTGAAATTAATGTGAACTTGAAAGAAGATATACCTTCAAATTATCCTTCAGTATACAAAAGAAACGAGGAAAtctatttgaaatctgaaattaaagaagAACCCATAGAATGGAATGGAATGGATTGCACTGCTAATTTGATAGACACTTCAGCTGAGGGTGGTCACGGAATTGAAGTTGAGTCAAAAAACTCAGAAATTGATAAACAATCGCATAACTTCACGCCTCGTCctgatttaacaaaaaattttactaaacGTGATGATGAAACCAAAAATACTTCGaaaatacttcaaaaatataaatgtgaactctgtaataaagaatttgcttttttgtgtaaattaaattttcacaaaCGTAAACATACTGGAGAGAGGTTATACCAGTGTGACGtatgtaataagtgtttcagcgAATCGGGTGTTTTAAGAAGACATCAGCGCGTGCATACTGGTGATaaaccatacaagtgtgacgtttgtaataagtgttttagGCAATCACAACATTTGAAAAATCACCAACACTTACATACTGCTCAGATGCCATATCAGTGTGTGGTTTGTAAAAAGGGTTTCACTCAATCAActgatttgcaaaaacatcagcgcatacatactgTAAATTCTGACTCGAAGTGGAAGCCTAAAATTCACAAAATGGAAGAAGTATCAGCAAGTACGTTCGATTTAAGTACAACGTGTAGACTGTGTTTGTCAAAAGGCGTTGCGACGTTAGATATATTTGCATTTTCCACAGTAATGATGGACAAAGTAGTCAATGCCATTATGAAGTGTGCTCCGGTTCAGATAATGAGATGCGATGAGATGCCAAATTTAATTTGCAATTCATGCAACACTCAATTGGAGAAAAGCCACCAGTTCCAGCAGCAAATAGTGCAGTCTGACCAGACACTGCAACGCTATCTACAGCGACAACGAACTTCTAACAAACAAATCAGGGTTGAAGGTTCCATTCAGGGGTCGTCTGAGGATTCTTTAATTCATAACACTAGTACAGATATCAAGATAAAACGTGAACCTTCAGAATTTCAAGACGAGTCTGATATTAATGTCAACTTGCAAGAAGATATACCTTCAAATATTACTTCAGTATACAAAAGAAACGAGGAAAtctatttgaaatctgaaattaaagaagAACCGATAGACGATTATTCATCAATTTCAACGGAATGCATTGATAACTCAATGGCTATTTTATCTGGGAGTGATGGCAGTAAAGATAGCTGTAAAATTAAAGAAGAACCCACAGATGTTAATTCAATTACAATGGAATGCACTGCTCATTTATTAGACACTTCATCTGATGGTGGCCAAGGAATTAAAGTCGAGCCAAAAATATCAGAAATCGAAAAACAATCGCATAACTTCACGCCCCGTCCTGatttaacagaaaattttacGAAACGTGATGATGGAACCAAAAATACttcgaaaatatttctaaaatataaatgtgaactCTGTAATAAAGGATTTGCTTTTTtgagtaaattaaattttcacaaaTGTGGACATACTGGAAAGAGTGGAGACATCACAAAGTTGTGCCGACTGTGCCTCAAGAAAAGTGCTAATTTAATTGATTTATATTCGCATTCACACAAACTTGGAGGACGAATAGTCGACGTTATTGAAATGTGCACCCCCGTTCGCATCGGAATGAGACAAGAAAAACTAACAAACGTCATCTGCAAACAGTGTTGCATAGAATTGGACAGAGTTCAgttctttctaaaaaaaattatgcaatcGGCAAGAGTACTGGAAAACTATTTACAACGGTTAGACCCCGGTTACGAAAATACAAAAGACGTCTCAATAAAACACGAAAGCATCGACGATGACGACACAAATCGGAGTTGGGAAGAAACAAGCGCCGATCAAGACGCTGCACCGGCGCCGACTTCCAACCAAGAAAACGTCACTTTCAATGCAAACTTTGTACTGAAATGCGAATACCCCGAACAACTGGTGAAAACACATTTCGAAGAAACGTTCAACACTCTTCCTTTAAATGCCGTAAAACAAGAAATAGACGACGTGACATCTGTCGCTGGCAGTAGCACTATTTTCGAACCTCTTGAAGATAACAAACCACCAGACAACAAAATCTTGCAATGTGAAATTTgcaataagatttttaaaaaggCTAGGTATTTGAATACACACAAACGAATTCATACTCGCACCAAACTGGTAAAAACTCGTTTCAAAGAAACTTTCAAAAATCTTCCTGCAAAGGACGTTAAACAAGAAACAGCCGACGTGATAAATGCATTGCCATCTATCGCTGGCAGCGGAACTACTTTAAAATCTTCTGAAGAAAATAATCCATCAAACgagacaaaaatattacaatgtgAGGTATGCAACAAAATCTTCACTAAAGTCAAATATTTAACCGTTCACAAACGTATTCATACTGGCAGAAAACCGTTCCAGTGTGACACTTGCGGCAAGTTTTTTGGCCGAGAAGACAATTTGAAATATCATAAACAATTGCATACAGGTGTGAAACCTTTTAAATGTAGCGTTTGCAGTAAATGTTTCAGCACAGATGATTATCTAAGGAGACATAAGTTAATGCATACTGGTGATAAACGGTACCAATGTGACGTTTGCAGTAAACTGTTCTTACGGATGACGCATTTGAAAATGCACAAAATGAAGCATACTGGGGAGAGACCGTTTCAATGTAAAGTTTGCGGTAAAGGTTTTACCCACGCGACTAATTTGACAAGACATACGGTCGTACACACTGGCCAGAAACCATTTCAGTGCGATGTCTGCGACAAAAGTTATAATCAGATGGGGCATCTCAAAAGACATAAACTTGCACAtaccggagagaaaccgtacagATGCGACATCTGCAATAAGTCTTACACGCAGTCGGCTAGTTTGAAGGCGCACAAACGAATACATGCCGGCGAGAAACCGTTCGAATGTGGGATATGTGGGCGATGCTTCGCTAATTCGAATAGTTTGAAGTTGCACCTTTCTTCTCACACGAATAAGCAAAATGAACAGTCCGATGTTTCGATTAAAAATGAACCATGCTCCGATTCAATTACCTAA
Protein Sequence
MDEVSANLFDLSTTCRLCLSRGVATLDIFAFSKAMKNKVADAIMECAPVHITRCDELPNLICNSCNTQLEKSHQFQKQIVQSDQTLRRYLQQRRTTNKQIKVECSNQGPSEVSVIHNTSTDIKIKRESSEFQNVSDINVNLQEDIPSNYTSVYKRNEEIYLKSEIKEEPIDDYSSISTECIDNAMAILSGSDGSKASCKIKEEPTDVNSITMECTANLIDTSSKGGQGIEVEPKNSEIAQQSHNCTRRPDLTENFTKPEGGAKNIPGMLQKYKCDLCNKQFNFLSHFNIHKRRHTGEKLYHCEICNKSFAESINFDSKWKPKIHKMEEVSGNTFDLSTTCRLCLSKGVATLDIFAFSTAMMDKVVNAIMKCAPVQITSSDKMPNLICNSCNTQLEKSHQFQKQIVQSDQTLQHYLQQLRTSNKQIRVECSIQGSSEDFLIHNSSTDIKIKREPSEFQDVSDINVNLQEDIPSNYTSVYKRNEEIYLKSEIKEEPIDDYSSIPTECIDNSMAILSGSDGSKDSCKIKEEPTYVNSITMLCTANLIDTLSEGGQGIEVESKNSEIEQQSHNFTPRSELTVHTGEKPYQCDVCNKCFSQSQHLKNHQHLHTDEKPYQCDVCKKGFTRSFDLQKHKRLHTGEKPFQCDVCNMCFRESRYLKKHQRVHTGEKPYQCDVCNKCFSQLVHLKKHQRIHTGERPYQCDVCNKCFSQSQHLKNHRHLHTDEKPYQCDVCKKGFTRSIDLQNHQRIHTGEKPYQCDVCNMCFRESRNLKKHQRLHTGETPYRCDVCNKSFSELGSLKRHQRVHTGEKPYRCDVCNKCFSKSASLKKHNCVYTVNSDSKWKTKIHKMEEVSANTFDLSTTCRLCLSKGVATLDIFAFSTAMTEKVANAIMKCAPIQIARCDEMPNLICNSCNTQLEKSHNFQKQIVQSDQTLRSYLQQRRTTYKQIKVECSNQGPSEVSVIHNTSTDIKIKREPSEFQDVSEINVNLKEDIPSNYPSVYKRNEEIYLKSEIKEEPIEWNGMDCTANLIDTSAEGGHGIEVESKNSEIDKQSHNFTPRPDLTKNFTKRDDETKNTSKILQKYKCELCNKEFAFLCKLNFHKRKHTGERLYQCDVCNKCFSESGVLRRHQRVHTGDKPYKCDVCNKCFRQSQHLKNHQHLHTAQMPYQCVVCKKGFTQSTDLQKHQRIHTVNSDSKWKPKIHKMEEVSASTFDLSTTCRLCLSKGVATLDIFAFSTVMMDKVVNAIMKCAPVQIMRCDEMPNLICNSCNTQLEKSHQFQQQIVQSDQTLQRYLQRQRTSNKQIRVEGSIQGSSEDSLIHNTSTDIKIKREPSEFQDESDINVNLQEDIPSNITSVYKRNEEIYLKSEIKEEPIDDYSSISTECIDNSMAILSGSDGSKDSCKIKEEPTDVNSITMECTAHLLDTSSDGGQGIKVEPKISEIEKQSHNFTPRPDLTENFTKRDDGTKNTSKIFLKYKCELCNKGFAFLSKLNFHKCGHTGKSGDITKLCRLCLKKSANLIDLYSHSHKLGGRIVDVIEMCTPVRIGMRQEKLTNVICKQCCIELDRVQFFLKKIMQSARVLENYLQRLDPGYENTKDVSIKHESIDDDDTNRSWEETSADQDAAPAPTSNQENVTFNANFVLKCEYPEQLVKTHFEETFNTLPLNAVKQEIDDVTSVAGSSTIFEPLEDNKPPDNKILQCEICNKIFKKARYLNTHKRIHTRTKLVKTRFKETFKNLPAKDVKQETADVINALPSIAGSGTTLKSSEENNPSNETKILQCEVCNKIFTKVKYLTVHKRIHTGRKPFQCDTCGKFFGREDNLKYHKQLHTGVKPFKCSVCSKCFSTDDYLRRHKLMHTGDKRYQCDVCSKLFLRMTHLKMHKMKHTGERPFQCKVCGKGFTHATNLTRHTVVHTGQKPFQCDVCDKSYNQMGHLKRHKLAHTGEKPYRCDICNKSYTQSASLKAHKRIHAGEKPFECGICGRCFANSNSLKLHLSSHTNKQNEQSDVSIKNEPCSDSIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-