Xxan020454.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754474.1:6106131-6128262[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2.1e-05 0.00043 21.1 3.6 1 23 162 184 162 184 0.98
2 20 0.0001 0.0021 18.9 5.4 1 23 190 212 190 212 0.98
3 20 0.00052 0.011 16.7 3.2 1 23 218 240 218 240 0.99
4 20 0.0007 0.014 16.3 3.7 1 23 526 548 526 548 0.98
5 20 0.00018 0.0038 18.1 3.8 1 23 1149 1171 1149 1171 0.98
6 20 5.3e-05 0.0011 19.8 2.1 1 23 1177 1199 1177 1199 0.98
7 20 0.00018 0.0038 18.1 3.8 1 23 1483 1505 1483 1505 0.98
8 20 5.3e-05 0.0011 19.8 2.1 1 23 1511 1533 1511 1533 0.98
9 20 0.00043 0.0087 17.0 4.5 1 23 1792 1814 1792 1814 0.99
10 20 9.2e-06 0.00019 22.2 4.7 1 23 1820 1842 1820 1842 0.99
11 20 0.00015 0.003 18.4 3.0 1 23 1848 1870 1848 1870 0.98
12 20 4.3e-06 8.8e-05 23.3 2.4 1 23 1876 1898 1876 1898 0.99
13 20 4e-05 0.00081 20.2 1.0 1 23 1904 1926 1904 1926 0.98
14 20 3.9e-05 0.00081 20.2 3.3 1 23 1932 1954 1932 1954 0.99
15 20 4.8e-06 9.8e-05 23.1 1.6 1 23 1960 1982 1960 1982 0.99
16 20 1.6e-05 0.00032 21.5 1.5 1 23 1988 2010 1988 2010 0.99
17 20 8.9e-05 0.0018 19.1 3.5 1 23 2016 2038 2016 2038 0.99
18 20 0.11 2.3 9.3 7.0 3 23 2046 2066 2044 2066 0.97
19 20 1.9e-05 0.0004 21.2 5.4 1 23 2072 2094 2072 2094 0.99
20 20 0.013 0.27 12.3 6.6 1 23 2100 2122 2100 2122 0.98

Sequence Information

Coding Sequence
ATGGACATTATCGTGAAAGAGAAACATTTGAAATCAACGAACATAATTAGCCGGGAAGtgcctttaaaattcgaaatcaaAGACGAGTTAACAGATGATAATTATTCCAAGTGTTCTCAGGAATATTTCATTCCAAAAACGGATCACTGTGGCGTTACTGTGAAATTCGAATCTATTGTTTTTCGTGATACATTTGGCACGAACTTTACAACGAGTGAAGGAGCGCCTTTAAATGATCCGTCAGCGAACAAAATGCCTCTAAAATtggaaatcaaagacgaaccaaTGGATTATAACTCATTAAATCTAACAGAATGCGTTGATGATGCAGTACACTCCTTATATATGGGTGACGATAGCAAAAACTCAAATATTGGCCACCTAACGGAAAATAAAGTTCTAGAATGTGTGGGCAAAAGTGTAGAGGATGAGAAACAAATTTCGGTAAATGATGATAATCATAAAGTAGCCACTAAAAAGAAATATCACtgcgacatttgtaataagaattTCACCAGATCTACTACTTTGAAAATTCACCAGCGTATACATACGGGTGAGAAGCcgcatcagtgtgacgtttgtaataagtgtttcaaccAATCGAGTAGTTTAAATCTTCACAAACGCatacatactggcgagaaaccgtatcagtgtgacgtctgtaaaaagtgtttctccATATCGGGTGATATGCTTagacacaaacgcacacataccgTAGAATGTGTTAATGACACAACAGAAACTTCATCCAATGGTGATGGTAGTGATGGTAGTTGGAAAAACGCAAAAGTTGATACTAACTACAACAATAAATTAGTTGAAAACATGGATATTGTTGAGAGAGAGAAACATTTTAAATCAACGAACAAAGCGAACCAGGAAAtgcctttaaaattcgaaatcaaAAACGAACTAACCGATGATAAGTATTCCATTGAAAAGGATTTTGAGgaacattttattcaaaaaccgAATCATTGTGGCGTTACTGTGAAATGTGAGTCTATTGTTTTGGATAATATTTCTAGCAGGAACCTTACCACGGATGAAATAACACCATTAAATTATACGTCAGCGAACAAAATTAACGTAGAAATGTATTCAGAAATCAACATCAAAGACGAACTAACGGATGATAATTCATTAAATCTAACAGCACGTACTGGTGAGACAGTAGAAACTTTATCCAACGGTGATGATAGTGAAATCGGTTGCGAAGATTCAAAAGTAGATATTAGCTGTCACACTAAATTGAGGGAAGACACGTATATTAACGAAAAAGAGACAAATATTAAACTAGCAAAGAAAAATGAGAATGAAATGCCTGGAAAATTCGAAATCAAACACGAACATATAGATTATAATACATCAAATCAAACAGAATGCGATGAAGGTGTAATAGACCCTTTAAATATGAGTGACGATAGCGAAATCTGTAGCAAAAACTCAAAGATCAATGGTTGCATACCGGAAAataatgttgcagaatgtctgAGCAAAAGCGCAGAAGGCGAGAAGAAAATGTCAGTAaatgatgataaaaataaaatagcaacTGAAAAGAAGTATCACTGTGACACCTGTAGTAAGAGTTTTTCCAACTCTTTTACTCTGAAAATGCACGCGCGTATACATAAGATAGTgcctttaaattatttttctgcgACCAAAATTACCGAGGAATTGCCTTTGAAAATGGAAATCGAAGAATTAAACCTACCAGAATGTGCTGACGATGCAGTAGAAACTTTATATGCGGGCGACACGAAtaaacataccgtacagattagtgCACTAAATTCTATTGTTCTTCATAATATATTTGGCATGAAGGTTCCCAAGAATGAAATGGTGCCTATAAAGTATAATTCATCAAACAAAATTAACGAAGAGCCGttgaaattcaaaatcaaaGACGAGCCAACGGATGATTCTTCATTAAATCTAACAAAATGTGCTGATGAGACAGCAGAAACTTCATCCAAGGGTGATGGTAGTGAAATCGTTTGCGATGATTCAAAGATTGGTATCAGCTTTTATACTAAATTGGGCGATAACACGAATATTATCGAGGAAGAGCaaaagtatatatcaataaataaaaataagcatgaaatgcctttgaaattaaaaatcaaagacGAGCCAACGGATGATTCTTCATTAAATCTAACAAAATGTGCTGATGAGACAGCAGAAACTTCATGCAAGGATGACGGTTGTGAAACCGTTTGGAAGGACTCAAAAGTTGATACTAACTACTGCAataatttagttgaaaacatgGATATTGTTGGGAGAGAGAAACATTTCAAATCAACAAACATAGTTAACcaggaaatgtttttaaaatccgaaatcaaagacgaaccaacggattataattcattaaatcaTACAGAATGCGTTGATGATGCAATAGACCCATTATATATGGGTGACGATACCGAAATCTACagccaaaactcaaaaatcaacAGTGGCCGCATACCGGAAAATAATGTTGTAGAATGTCTGGGCAAAAGTGCAGAGGACGAGAAACAAATGTCGATTCCCAAGAATGAAATGGCGCCTATAAAGTATACTTCAGCAAACAAAATTAACGAAGAgcctttgaaattaaaaatcaaagacGAGCCAACGGATGATTCTTCATTAAATCTAACGAAATGTGCTGGTGAGACAGCAGAAACTTCATCCAAGAATGACGGTTGTGAAACCGTTTGCAAGGACTCAAAAGTTGATACTAACTACTGCAataatttagttgaaaacatgGATATTGTTGGGAGAGAGAAACATTTTAAATCAACAAACATAGTTAACCAGGAAAagcctttaaaattcgaaatcaaagacgaactaACCGATGATAATCATTCAATTGAAATGACTTCTGAGGAACATTTAATTCAACAAACAAATCACTTCTATGTCACTGAAAAACGTGAGTTTATTGTTTTTCGTAATACATTTGACTCGAACTGTACCACAAGTGAAATAGAACCTTTAAATGATACGTCAGCGAACAAAATGCTTCTGAAATtggaaatcaaagacgaaccaaTGGAATCTTTAAATGTAACAGCAAGTGCTGATGAGACAGTAAAAACTTTATCCAACAGAAATGGTAGCGCAATCGGTTGCGAAgatttaaaagagaaaaatattaaattagcaaagaaaaaaaagcaTGAAATGCCTGGAATATTCGAAATCAAAGTCGAGCCTGTAGATTATTATACATCAAATCTAACAGAATGCGTTGATGATGCAATAGACCCTTTATATATGGGTGACGATAGCGAAATCTACAGCCAAAACCCAAAAATCAACAGTGGCCGCATACCGGAAAATAATGTTGCAGGATGTCTGGGCAAAAGTGTAGAGGACGAAAAAACAATGTCGGTAAATGAAACAGCAACTGAAAAGAAATATTcctgtgacatttgtaataagagttttagCAACTTTTGTACTTTGAAAATTCACACGCGTATACATACGGGTGAGAAGCCACAtcgatgtgacgtttgtaataaaggtTTCAACCAATCAGGCAGTTTAAATGTTCATAAACGCACACATACAGCAAACAAAATTAACGAAGAgcctttgaaattaaaaatcaaagacGAGCCAACGGATGATTCTTCATTAAATCTAACGAAATGTGCTGGTGAGACAGCAGAAACTTCATCCACAAATGACGGTTGTGAAACCGTTTGCAAGGACTCAAAAGTTGATACTAACTACTGCAataatttagttgaaaacatgGATATTGTTGGGAGAGAGAAACATTTTAAATCAACAAACATAGTTAACCAGGAAAagcctttaaaattcgaaatcaaagacgaactaACCGATGATAATCATTCAATTGAAAAGACTTCTGAGGAACATTTAATTCAACAAACAAATCACTTCTATGTCACTGAAAAACGTGACTTTATTGTTTTTCGTAATACATTTGGCTCGAACTCTACCACAAGTGAAATAGAACCTTTAAATGATACGTCAGCGAACAAAATGCCTCTGAAATtggaaatcaaagacgaaccaaTTGAATCTTTAAATGTAACAGCATGTGCTGATGAGACAGTAAAAACTTTATCCAACAGAAATGGTAGCGCAATCGGTTGCGAAgatttaaaagagaaaaatattaaattagcaaagaaaaaaaagcaTGAAATGCCTGGAATATTCGAAATCAAAGTCGAGCCTGTAGATTATTATACATCAAATCTAACAGAATGCGTTGATGATGCAATAGACCCTTTATATATGGGTGACGATAGCGAAATCTACAGCCAAAACCCAAAAATCAACAGTGGCCGCATACCGGAAAATAATGTTGCAGGATGTCTGGGCAAAAGTGTAGAGGACGAAAAAACAATGTCGGTAAATGAAACAGCAACTGAAAAGAAATATTcctgtgacatttgtaataagagttttagCAACTTTTGTACTTTGAAAATTCACACGCGTATACATACGGGTGAGAAGCCACAtcgatgtgacgtttgtaataaaggtTTCAACCAATCAGGCAGTTTAAATGTTCATAAACGCACACATACAGAGTGTGCTAATGATTCAGTAGCAACTTTATCCAAAGTTGATGGCAGTGAAATCTTTTGCGAGGACACAAAGGTTGATACTAACTACTACAGTAAATTAGGCGAAAACATGCACGCTATCGGGAaacatgaaaattttaaatcagcGACCCAACGTAATGAAATtcctttaaaatttgaaatcaaaGTCGAACCAACGGACGATACTTCATTAAACCTAACAGATTGTGCTGATGATACGGTAGAAGATAGTGAAATCGATTTCGAAGAGTCAAAAGTTGGTATTAACAGCTACCATAAATTGGTCGAAGACAAAGACATTTTTGAGAGagagaaacattttaaaaaaaggaacaaAGTTACCGAAGAAATCActttaaaatctgaaatcaaagtcGAGCCAACGAATGATGATAATCTAACAAAATGTGCTGATGATATAGCAGACACTTCATCCAAGGGTGATGGTAGTGAAACCGTTTGGGAAGACTCAAAGGTTGGCACTAATTACCACAATGAATTGGTCGAAAACATGGATGTAATTGGGAACGCGAAACGTTTTAAAATAACGAACAAAATTAATCAAGGAGtacctttaaaattcgaaatcaaAGAAGAACCAACAAATGATGATTCATCAAATCTAACGGAGTATGCTGATAATACAGTAAAAACTTCATATATAGAAGACACGTATGAACATACGAGTGAGAAGCCAGATCAGTGTGACGTCAGTAAAAAATTATCCGTatcacatactggtgagaaaccgtaccagtgtggtGTTTGTAATAAGTACTTCACCGAATCAAGACATTTAACtagtcacaaacgcacacatactggtgagaaaccatatcaatgtgaagtttgtaataagtgtttcagccaATCAAGCAGTTTAAATCTTCATAAACGtaaacataccggtgagaaaccatacaagtgtgacgtttgtaataagtgcttTTCCGTATTAAGTAGTTTAAATAATCACAAAgtcacacatactggtgagaaaccataccagtgtgacgtttgcaacaagaACTTCTCCATGTCGAGTCATTTGATTAGGCACGCTCGCACacatacaggtgagaaaccataccagtgtgacgtttgtgataAGCGCTTCTCCGTATCAAGTAGTTTAAGTAATCACAAGCTctcacatactggtgagaaaccataccaatGTGAAGTTTGTAATAAGTGCTTCTCTGCATCAAGTTATTTAATtagtcacaaacgcacacatactggtgagaaaccatatcaatgtgacactTGCAATAAGAGTTTTAGCCAATTAATCAACTTAAATGTTCATAAACGcacgcatactggtgagaaaccataccagtgtgacgtttgtaataagcagTTCTCCGTTTCAAGTAGTTTAAATctacacaaacgcacacatactggtgagaaaccatatcagtgtgacgtttgcaataagtgCTTCTCCGTGTCAAGTCGTCTAATTAgccacaaacgcacacatactggtgagaaaccatactggtgtgacgtttgtaataagtgtttcagccaGCTGTGCAGTTTAAATAATCACAAACAcatacatactggagagaaaccataccagtgtgacgtttgtaataagtgcttCTCTGTATCAAGTCATTTAATtagtcacaaacgcacacataccggTGAAAAACCATACCGGTGTGACGTCTGTAACAAGTGTTTCAGCCAATTAAGCAGTTTAAATTGTCACAAACTCACACATAATGCAGAGAAATCACATTAG
Protein Sequence
MDIIVKEKHLKSTNIISREVPLKFEIKDELTDDNYSKCSQEYFIPKTDHCGVTVKFESIVFRDTFGTNFTTSEGAPLNDPSANKMPLKLEIKDEPMDYNSLNLTECVDDAVHSLYMGDDSKNSNIGHLTENKVLECVGKSVEDEKQISVNDDNHKVATKKKYHCDICNKNFTRSTTLKIHQRIHTGEKPHQCDVCNKCFNQSSSLNLHKRIHTGEKPYQCDVCKKCFSISGDMLRHKRTHTVECVNDTTETSSNGDGSDGSWKNAKVDTNYNNKLVENMDIVEREKHFKSTNKANQEMPLKFEIKNELTDDKYSIEKDFEEHFIQKPNHCGVTVKCESIVLDNISSRNLTTDEITPLNYTSANKINVEMYSEINIKDELTDDNSLNLTARTGETVETLSNGDDSEIGCEDSKVDISCHTKLREDTYINEKETNIKLAKKNENEMPGKFEIKHEHIDYNTSNQTECDEGVIDPLNMSDDSEICSKNSKINGCIPENNVAECLSKSAEGEKKMSVNDDKNKIATEKKYHCDTCSKSFSNSFTLKMHARIHKIVPLNYFSATKITEELPLKMEIEELNLPECADDAVETLYAGDTNKHTVQISALNSIVLHNIFGMKVPKNEMVPIKYNSSNKINEEPLKFKIKDEPTDDSSLNLTKCADETAETSSKGDGSEIVCDDSKIGISFYTKLGDNTNIIEEEQKYISINKNKHEMPLKLKIKDEPTDDSSLNLTKCADETAETSCKDDGCETVWKDSKVDTNYCNNLVENMDIVGREKHFKSTNIVNQEMFLKSEIKDEPTDYNSLNHTECVDDAIDPLYMGDDTEIYSQNSKINSGRIPENNVVECLGKSAEDEKQMSIPKNEMAPIKYTSANKINEEPLKLKIKDEPTDDSSLNLTKCAGETAETSSKNDGCETVCKDSKVDTNYCNNLVENMDIVGREKHFKSTNIVNQEKPLKFEIKDELTDDNHSIEMTSEEHLIQQTNHFYVTEKREFIVFRNTFDSNCTTSEIEPLNDTSANKMLLKLEIKDEPMESLNVTASADETVKTLSNRNGSAIGCEDLKEKNIKLAKKKKHEMPGIFEIKVEPVDYYTSNLTECVDDAIDPLYMGDDSEIYSQNPKINSGRIPENNVAGCLGKSVEDEKTMSVNETATEKKYSCDICNKSFSNFCTLKIHTRIHTGEKPHRCDVCNKGFNQSGSLNVHKRTHTANKINEEPLKLKIKDEPTDDSSLNLTKCAGETAETSSTNDGCETVCKDSKVDTNYCNNLVENMDIVGREKHFKSTNIVNQEKPLKFEIKDELTDDNHSIEKTSEEHLIQQTNHFYVTEKRDFIVFRNTFGSNSTTSEIEPLNDTSANKMPLKLEIKDEPIESLNVTACADETVKTLSNRNGSAIGCEDLKEKNIKLAKKKKHEMPGIFEIKVEPVDYYTSNLTECVDDAIDPLYMGDDSEIYSQNPKINSGRIPENNVAGCLGKSVEDEKTMSVNETATEKKYSCDICNKSFSNFCTLKIHTRIHTGEKPHRCDVCNKGFNQSGSLNVHKRTHTECANDSVATLSKVDGSEIFCEDTKVDTNYYSKLGENMHAIGKHENFKSATQRNEIPLKFEIKVEPTDDTSLNLTDCADDTVEDSEIDFEESKVGINSYHKLVEDKDIFEREKHFKKRNKVTEEITLKSEIKVEPTNDDNLTKCADDIADTSSKGDGSETVWEDSKVGTNYHNELVENMDVIGNAKRFKITNKINQGVPLKFEIKEEPTNDDSSNLTEYADNTVKTSYIEDTYEHTSEKPDQCDVSKKLSVSHTGEKPYQCGVCNKYFTESRHLTSHKRTHTGEKPYQCEVCNKCFSQSSSLNLHKRKHTGEKPYKCDVCNKCFSVLSSLNNHKVTHTGEKPYQCDVCNKNFSMSSHLIRHARTHTGEKPYQCDVCDKRFSVSSSLSNHKLSHTGEKPYQCEVCNKCFSASSYLISHKRTHTGEKPYQCDTCNKSFSQLINLNVHKRTHTGEKPYQCDVCNKQFSVSSSLNLHKRTHTGEKPYQCDVCNKCFSVSSRLISHKRTHTGEKPYWCDVCNKCFSQLCSLNNHKHIHTGEKPYQCDVCNKCFSVSSHLISHKRTHTGEKPYRCDVCNKCFSQLSSLNCHKLTHNAEKSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-