Xxan022791.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754475.1:19157017-19170021[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.13 2.8 9.1 4.1 1 23 274 296 274 296 0.98
2 29 4.9e-05 0.001 19.9 2.2 1 23 302 324 302 324 0.99
3 29 1.8e-05 0.00036 21.3 5.1 1 23 330 352 330 352 0.99
4 29 2.6e-05 0.00054 20.8 4.9 1 23 392 414 392 414 0.98
5 29 0.0018 0.036 15.0 6.7 1 23 420 442 420 442 0.99
6 29 0.18 3.7 8.7 1.0 1 23 448 470 448 470 0.97
7 29 2e-05 0.0004 21.2 5.7 1 23 476 498 476 498 0.99
8 29 0.00086 0.018 16.0 2.7 1 23 536 558 536 558 0.98
9 29 0.00049 0.0099 16.8 0.4 1 23 562 584 562 584 0.98
10 29 2.2e-05 0.00045 21.0 7.2 1 23 590 612 590 612 0.98
11 29 0.12 2.5 9.3 6.1 1 23 835 857 835 857 0.98
12 29 4.8e-05 0.00098 20.0 2.6 1 23 863 885 863 885 0.99
13 29 3.5e-05 0.00071 20.4 5.0 1 23 891 913 891 913 0.99
14 29 0.013 0.26 12.3 4.7 1 23 1237 1259 1237 1259 0.99
15 29 4.8e-05 0.00098 20.0 2.6 1 23 1266 1288 1266 1288 0.99
16 29 3.5e-05 0.00071 20.4 5.0 1 23 1294 1316 1294 1316 0.99
17 29 0.0007 0.014 16.3 0.7 1 23 1354 1376 1354 1376 0.99
18 29 0.00021 0.0044 17.9 0.5 1 23 1380 1402 1380 1402 0.99
19 29 0.00016 0.0033 18.3 6.4 1 23 1408 1430 1408 1430 0.98
20 29 0.002 0.04 14.9 6.8 1 23 1436 1458 1436 1458 0.99
21 29 5e-05 0.001 19.9 2.1 1 23 1464 1486 1464 1486 0.99
22 29 0.45 9.2 7.5 1.3 1 14 1492 1505 1492 1509 0.88
23 29 0.0078 0.16 13.0 4.3 1 21 1711 1731 1711 1732 0.97
24 29 0.74 15 6.8 0.2 5 20 1733 1748 1733 1750 0.91
25 29 0.00054 0.011 16.6 1.6 1 23 1785 1807 1785 1807 0.98
26 29 3.4e-05 0.00069 20.4 0.9 1 23 1811 1833 1811 1833 0.99
27 29 4.9e-05 0.001 19.9 2.8 1 23 1839 1861 1839 1861 0.98
28 29 0.00079 0.016 16.1 4.1 1 23 1867 1889 1867 1889 0.99
29 29 0.00035 0.0071 17.3 3.4 1 23 1895 1917 1895 1917 0.99

Sequence Information

Coding Sequence
ATGGTAGAAATAACGGTAAATATCGATCAGATAGATAaaatgtgtcgattgtgcttatcaaCAAGCGATACGCTGTTGGATATATTTCAGTCTTCGACAAGTACAAAAAACAGAGTAGCTGATGTAATAATGCAATGTGCTCCCGTTAAGataaataaatgcgATGCGATGCCGAAGTTTATCTGCCGATTGTGTTACACCAAACTGGATAAAAATCACCAGTTCCAGACGCAAATagtacagtctgaaaaaacaTTGCAACGCTATTTGCAACAGCTCCGCGCTTCTGATAACCAAATCAACAATAAAAGTACAAAAGATCTTTTAATTCGAAATACTAATACAGTTAATGTAACCGTGAAGACTCCAATTTCAAACAAATGTGCAGATGACGCAGCGGACCCTCTTTCAAGGTATGATTACAGTGAGATCAGCTGCGAAgacacaaaaaactattttgacaGCAGCAAATTAATCGAAGACATAGACGTCAGTTGGAAAGAGGAAGTGattgtaaatttaaattcagAAAATAAAGTTGAGGACACGGCTTTCAGTTTCGGAATCAAAAACGAATTGATAATAGATGATGATTCATCATTTTCAACAGAGCATCTAGACGACTCATGCGAAACTTTTTCTAAGTGTTATGAAAGTGAAATTAGTTGCGAAGGCCCAAAAATCACTATTGACCGCACTACGAGGAATTTCGAGCGTCCTTGTTCAGCTGACATAACAGAAGATTGTGATAAACACGAAGAAGAGAACACAAATACCTTGGTAAATAATGAGATTCACAGTGACGCAAGTAAAACCAAGTTTAAATGTGACCTTTGTGACAATTGTTTCCTCAACCTATCAAGTTTATTTCGACACAGAAGCTCGCATAGTGCTACGAAATTATATGAATGTGACGTCTGCAAAAAATGTTTCCCTCAAGCAAATACTTTAAATATccacaaacgtacacatactggtgataAACCGTATCGGTGTCACGTTTGTGATAAACACTTTACTCAGCTGAGCAACTTAATTGATCACAAACGTATGCATACCGGTGAGAGAGACTGTGATGATATAATAGAAAACTTTGAAAAACGTACACCGAGAAACAAAATTGTACTAGACAATTTGAAGAAACACAAACTTATGCACACCGGAGAGAAGCGGTATATGTGTGAAATGTGCAGTAAGTGTTTTACTAAATCGGATCATTTGAAGATTCACATACGTATACATACGGGTGAgaagccgtatcagtgtgacgtttgtgagAAGCACTTTGCTTATTTATACTGCCTAAAAAGACATaaacgcacacacactggtgagaaaccatatcaatgtgacgtgTGTTATAAGCAGTTTGGACAgtctttcattttaaaaattcacaaacgTGCACATACCGGTGATAAACCGTATCGGTGTCACGTTTGTGATAAACGCTTTACTCAGGTGAGCAACTTAATTCATCACAAACGTATGCATACCGGTGAGAGAGACTGTGATGATAGAATAGAAAACTTTGAAAAACGTACACCGAGAAGCAGAATTGTTCCAAAAACTAAAGAGACTCGCAAGAGAGCAAGTAAAAACGAATATAAGTGTGACGGTTGTAATAAAAGTTTCCCCGCCTTGCATACCTTGAATAATCACAAACGTTATCAtcagaaaccatatcagtgtgacgtttgtgagAAGCGTTTTTCTATACTAGGCAATTTGAAGAGTCACAAACTTATACACACCGGAGAGAAGTCGTATATGTGTGAAATGTGCAGTAAGTGTTTTAGTAGATTGTATCATTTGAAGACTCACATGCGCATGCATACGGGCGTTACGCTGTTGGATATATTTCAGTCTTCGACAAGTACAAAAAACAAAGTAGCTGATGTAATAATGCAATGTGCTCCCGTTAAGATAAAAAAATGCGATGCGATGCCGAAATTCATCTGCCGATTGTGTTACACTAGACTGGAGAAAAATCACCAGTTCCAGACGCAAATattacagtctgaaaaaacaCTGCAACGCTATTTGCAACAGACTCCAATTTCAAGCAAATGCGCAGATGACGCAGCGGACCCTCTTTCAAGGTATGATTACAGTGAGATCAGCTGCGaagacacaaaaaaatattttgacaacaGCAAATTAATCGAAGACATAGACGTCAGTTGGAAAGAGAAAGTGACTGTAAATTTAAATTCAGAAAATAAAGTTGAGGACACGGCTTTCAATTTCGGAATCAAAAACGAATTGATAATAGATGATGATTCATCATTTTCAACAGAGCATCTAGACGACTCTTGTGAAACTTTTTCTAAGTGTTATGAAAGTGAAATTAGTTGCGAAGGCCCAAAAATTGACCGCACTACGAGGAATTTCGAGCGTCCTTGTTCAGCTGACATAACAGAAGATTGTGATAAACACGAAGAAGAGAACACAAATACCTTGGTAAATAATGAGATTCACAGTGAAGCAAGTAAAACCAAGTTTAAATGTGACCTTTGTGACAATTGTTTCCTCAATCCATCAAGTTTATTTCGACACAGATGCTCGCATATTGTTATGAAATTATATGAATGTGATGTgtgcaaaaaatgtttccctcaagcaaatactttaaaaatccacaaacgtacacatactggtgataAACCGTATCGGTGTCACGTTTGTGATAAACACTTTAATCAGCTGAGCAACTTAATTGATCATAAACGTATGCATACCGGTGAGAGAGACTGTGATGATAGAATAGAAAACTTTGAAAAACGTGCACCGAGAAACAAAATTGTTCCAAAAACTGAAGTGATTTGCAAGAAAGCcagtaaaaatgaatataagtGTGACGTTTCTGATAAGCATTTTCCTATAATAGACAATTTGAAGAAACACAAACTTATGCACACCGGAGCGAAGCCGTATATGTGTGAAATATGCAGCGTTACGCTGTTGGATATATTTCAGTCTTCGACAAGTTCGAAAAACAAAGTAGCTGATGTAATAATGCAATGTGCTCCCGTTAAGATAAAAAACTGCGATGCGATGCCGAAATTTATCTGCCGATTGTGTTACACCAAACTGGAGAAAAATCACCAGTTCCAGACGCAAATagtacagtctgaaaaaacaCTGCAACGCTATTTGCAACAGCTCCGCGCTTCTGACAAGCAAATCAACACTAAAAGTCCAGAAGATCTTTTAATTCGAGATACTAATGCAGTTAATGTAACCGTGAAGACTCCAATTTCAAACAAATGCGCAGATGACGCAGCGGACCCTCTTTCAAGGTATGATTACAGTGAGATCAGCTGCGAAgacacaaaaaactattttgacaACAGCAAATTAATCGAAGACATAGACGTCAGTTGGAAAGAGAAAGTGACTGTAAATTTAAATTCAGATTCAGAAAATAAAGTTAAGGGCACGGCTTTCAGTTTCGGaattaaaaacgaattgatAATAGATGATAATTCATCATTTTTAACGGAGCATCTAGACGACTCATGCGAAACTTTTTCTAAGTGTTATGAAAGTGAAATTAGTTGCGAAGGCTCAAAAATTGACCGCACTACGAGGAATTTCGAGCGTCCTTGTTCAACTGACATAACAGAAGATTGTGATAAACACGAAGAAGAGAACACAAATACCTTGGTAAATAATGAGATTCACAGTGAAGCAAGTAAAACCAAGTTTAAATGTGACTTTTGTGACAATTGTTTCCTCAATCCATCAAGTTTATTTCGTCACAGACGCTCGCATAATTTAGTTATGAAATTATATGAATGTGATGTGTGCAAGAAATGTTTCCCTCAagcaaatactttaaaaatccacaaacgtacacataccgGTGATAAACCGTATCGGTGTCACGTGTGTGATAAACACTTTAATCAGCTGAGCAACTTAATTGATCACAAACGTATGCATACCGGTGAGAGAGACCGTGACGATAGAATAGAAAGCTTTGAAAAACGTACACCGAGAAACAAAATTGTTCACGAAACTAAAGAGACTCGCAAGAAAGCAAGTATAAAAGAATATAAGTGTGACGATTGTAATAAAAGTTTCCCCGTCTTGTATATCTTGAATAGGCACAAACGTATACAtcagaaaccatatcagtgtgacgtttgtgagAAGCGTTTTTCTGCACTTGGCAATTTGAACAGTCACAAACTTACACACACCGGGGAGAAGCCGTATATGTGTGAAATGTGCAGTAAGTGTTTTACTAAATCGGATCATTTGAAGATTCACACACGTATGCATACAGGAGAGAAGCCGTATCAGTGCGACGTTTGTGAGAGGCACTTTGCCCATTTACACGGCCTAAAAAGAcataaacgcacacatactggtgagaaaccatatcagtgtgacgtgtgTAATAAGGAGTTTGGACAGTCTACCCATTTAAAAgttcacaaacgtatacatactggtgagaaaccgtatcagtgtaacTTGTGTAATAAACGTTTCGCCAGCTCAGGCTGTATCAAAAATTGCGATGAGATGCCGAATTTTATCTGCCGCTTGTGTCACACTAAACTGGAGAAAAATCATCAGTTTCAGGCACAAATAGTTCAGTCTGAAAAAACACTACGACGCTACTTACAACAGCTTCGGAGTTCTGACGCACCAATCAAGACAGAATATTCTGAAGAAATTCGTGATATTAATGCAGATAACACTGAAAAATCACTAATTTCAACAGAATGTGCAGATGACACAGTGGAAACGTTATCAAGTTGTGAGGACACAAAAAACGATTTTGATAACCGTAAATTAATCGAAGACATAGACGCTAGTTGGAAAGGGAAAGAGCATGATCATTTTATTTCAGAGAATAAAGTTAAGGAAGAATCGACGTACAGTTTAGAAATCAAAGACGAATTGGTACTAGATGATAATTCCTCATTTTCACCAGAGTGTGTAGATGACTCAAAAGGGactttttcaaagttttataaaaGTGAAATTAGTTGCGAAACCCCAAAAATCGCTACGAGGAATTTCGAGCGTCCTTGTTCATCTGATATAATAGAAGATTGTGAAAAACGAGAAGGGGGGGATAATGAGATTCACAGTGAAGCAAGTAAAACCAAATATAAATGTGACTTTTGTAACAAGTGTTTTCTCAACCAATCAAGTTTATCGAGACACAGACGCTTGGTGTGTAATAAATGTTTCCCTCAAGCAAATACTTTAAATATCCACAAAAGTTCACGTACTGGTGAGAGACACTGTAATGATACAATAGAAAAACGTATACCAAGAAGCAAAATTGTTCGAAAAACTAAAACTCGCAAGACTGCGACTAAAAACGAATTTAAGTGTGCcgattgtaataaatgtttcccCGCCTTATATGCCTTAAATCAGCACAAGCGTATACAtcagaaaccgtatcagtgtgacaatTGTGATAAGCGTTTTTCTGTACTAGGTAATTTAAATAGTCACAAacttacacatactggtgagaaaccatacatgTGTGAACTTTGCAGTAAAAGTTTTAGCAAAGCGGACCATTTAAAGATTCACAAACGTATGCATACTGGTGAAaagccgtatcagtgtgacgtttgtgaaaAGCACTTTGCTTATTTACACGGCCTAAAAAGACATAAACGcattcatactggtgagaaaccatatcagtgtgacctttgtggGAAGTGTTTCATTGAATCGAGTAAAATGAAATATCATCGgcgcgtacatactggtgagaaaccgtgtCAGAGTAACTAG
Protein Sequence
MVEITVNIDQIDKMCRLCLSTSDTLLDIFQSSTSTKNRVADVIMQCAPVKINKCDAMPKFICRLCYTKLDKNHQFQTQIVQSEKTLQRYLQQLRASDNQINNKSTKDLLIRNTNTVNVTVKTPISNKCADDAADPLSRYDYSEISCEDTKNYFDSSKLIEDIDVSWKEEVIVNLNSENKVEDTAFSFGIKNELIIDDDSSFSTEHLDDSCETFSKCYESEISCEGPKITIDRTTRNFERPCSADITEDCDKHEEENTNTLVNNEIHSDASKTKFKCDLCDNCFLNLSSLFRHRSSHSATKLYECDVCKKCFPQANTLNIHKRTHTGDKPYRCHVCDKHFTQLSNLIDHKRMHTGERDCDDIIENFEKRTPRNKIVLDNLKKHKLMHTGEKRYMCEMCSKCFTKSDHLKIHIRIHTGEKPYQCDVCEKHFAYLYCLKRHKRTHTGEKPYQCDVCYKQFGQSFILKIHKRAHTGDKPYRCHVCDKRFTQVSNLIHHKRMHTGERDCDDRIENFEKRTPRSRIVPKTKETRKRASKNEYKCDGCNKSFPALHTLNNHKRYHQKPYQCDVCEKRFSILGNLKSHKLIHTGEKSYMCEMCSKCFSRLYHLKTHMRMHTGVTLLDIFQSSTSTKNKVADVIMQCAPVKIKKCDAMPKFICRLCYTRLEKNHQFQTQILQSEKTLQRYLQQTPISSKCADDAADPLSRYDYSEISCEDTKKYFDNSKLIEDIDVSWKEKVTVNLNSENKVEDTAFNFGIKNELIIDDDSSFSTEHLDDSCETFSKCYESEISCEGPKIDRTTRNFERPCSADITEDCDKHEEENTNTLVNNEIHSEASKTKFKCDLCDNCFLNPSSLFRHRCSHIVMKLYECDVCKKCFPQANTLKIHKRTHTGDKPYRCHVCDKHFNQLSNLIDHKRMHTGERDCDDRIENFEKRAPRNKIVPKTEVICKKASKNEYKCDVSDKHFPIIDNLKKHKLMHTGAKPYMCEICSVTLLDIFQSSTSSKNKVADVIMQCAPVKIKNCDAMPKFICRLCYTKLEKNHQFQTQIVQSEKTLQRYLQQLRASDKQINTKSPEDLLIRDTNAVNVTVKTPISNKCADDAADPLSRYDYSEISCEDTKNYFDNSKLIEDIDVSWKEKVTVNLNSDSENKVKGTAFSFGIKNELIIDDNSSFLTEHLDDSCETFSKCYESEISCEGSKIDRTTRNFERPCSTDITEDCDKHEEENTNTLVNNEIHSEASKTKFKCDFCDNCFLNPSSLFRHRRSHNLVMKLYECDVCKKCFPQANTLKIHKRTHTGDKPYRCHVCDKHFNQLSNLIDHKRMHTGERDRDDRIESFEKRTPRNKIVHETKETRKKASIKEYKCDDCNKSFPVLYILNRHKRIHQKPYQCDVCEKRFSALGNLNSHKLTHTGEKPYMCEMCSKCFTKSDHLKIHTRMHTGEKPYQCDVCERHFAHLHGLKRHKRTHTGEKPYQCDVCNKEFGQSTHLKVHKRIHTGEKPYQCNLCNKRFASSGCIKNCDEMPNFICRLCHTKLEKNHQFQAQIVQSEKTLRRYLQQLRSSDAPIKTEYSEEIRDINADNTEKSLISTECADDTVETLSSCEDTKNDFDNRKLIEDIDASWKGKEHDHFISENKVKEESTYSLEIKDELVLDDNSSFSPECVDDSKGTFSKFYKSEISCETPKIATRNFERPCSSDIIEDCEKREGGDNEIHSEASKTKYKCDFCNKCFLNQSSLSRHRRLVCNKCFPQANTLNIHKSSRTGERHCNDTIEKRIPRSKIVRKTKTRKTATKNEFKCADCNKCFPALYALNQHKRIHQKPYQCDNCDKRFSVLGNLNSHKLTHTGEKPYMCELCSKSFSKADHLKIHKRMHTGEKPYQCDVCEKHFAYLHGLKRHKRIHTGEKPYQCDLCGKCFIESSKMKYHRRVHTGEKPCQSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-