Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754475.1:1024824-1027577[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.24 5 8.3 4.5 1 21 55 75 55 76 0.96

2 26 3.7e-06 7.6e-05 23.5 2.8 1 23 112 134 112 134 0.99

3 26 1.4e-05 0.00029 21.6 4.6 1 23 140 162 140 162 0.99

4 26 0.0016 0.033 15.1 0.5 1 23 168 190 168 190 0.99

5 26 1.4e-05 0.00029 21.6 1.6 1 23 196 218 196 218 0.98

6 26 0.011 0.22 12.6 7.1 1 20 224 243 224 245 0.95

7 26 0.0052 0.11 13.5 2.7 1 23 268 290 268 290 0.95

8 26 0.00022 0.0044 17.9 4.9 1 23 296 318 296 318 0.98

9 26 0.015 0.31 12.1 7.6 1 23 324 346 324 346 0.97

10 26 0.00014 0.0029 18.5 0.8 1 23 352 374 352 374 0.98

11 26 5.6e-06 0.00011 22.9 1.8 1 23 380 402 380 402 0.98

12 26 2.6e-05 0.00054 20.8 3.0 3 23 410 430 408 430 0.98

13 26 0.00068 0.014 16.3 2.1 1 23 436 458 436 458 0.98

14 26 0.017 0.34 12.0 1.3 1 23 467 489 467 489 0.98

15 26 0.00039 0.008 17.1 7.4 1 23 578 600 578 600 0.97

16 26 0.015 0.31 12.1 2.1 1 23 606 628 606 628 0.98

17 26 3.8e-05 0.00078 20.3 0.5 1 23 634 656 634 656 0.99

18 26 0.013 0.26 12.3 4.1 1 20 662 681 662 684 0.95

19 26 0.00044 0.009 16.9 4.9 1 23 690 712 690 712 0.98

20 26 0.00046 0.0094 16.9 3.7 1 23 718 740 718 740 0.98

21 26 7.3e-05 0.0015 19.4 5.7 1 23 746 768 746 768 0.99

22 26 6.8e-05 0.0014 19.5 2.2 1 23 774 796 774 796 0.96

23 26 0.00024 0.0049 17.8 6.2 1 21 802 822 802 824 0.93

24 26 0.00078 0.016 16.1 3.2 1 23 830 852 830 852 0.98

25 26 9.2e-05 0.0019 19.1 3.3 1 23 858 880 858 880 0.99

26 26 0.0035 0.071 14.1 2.0 1 23 886 908 886 908 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.24	5	8.3	4.5	1	21	55	75	55	76	0.96
2	26	3.7e-06	7.6e-05	23.5	2.8	1	23	112	134	112	134	0.99
3	26	1.4e-05	0.00029	21.6	4.6	1	23	140	162	140	162	0.99
4	26	0.0016	0.033	15.1	0.5	1	23	168	190	168	190	0.99
5	26	1.4e-05	0.00029	21.6	1.6	1	23	196	218	196	218	0.98
6	26	0.011	0.22	12.6	7.1	1	20	224	243	224	245	0.95
7	26	0.0052	0.11	13.5	2.7	1	23	268	290	268	290	0.95
8	26	0.00022	0.0044	17.9	4.9	1	23	296	318	296	318	0.98
9	26	0.015	0.31	12.1	7.6	1	23	324	346	324	346	0.97
10	26	0.00014	0.0029	18.5	0.8	1	23	352	374	352	374	0.98
11	26	5.6e-06	0.00011	22.9	1.8	1	23	380	402	380	402	0.98
12	26	2.6e-05	0.00054	20.8	3.0	3	23	410	430	408	430	0.98
13	26	0.00068	0.014	16.3	2.1	1	23	436	458	436	458	0.98
14	26	0.017	0.34	12.0	1.3	1	23	467	489	467	489	0.98
15	26	0.00039	0.008	17.1	7.4	1	23	578	600	578	600	0.97
16	26	0.015	0.31	12.1	2.1	1	23	606	628	606	628	0.98
17	26	3.8e-05	0.00078	20.3	0.5	1	23	634	656	634	656	0.99
18	26	0.013	0.26	12.3	4.1	1	20	662	681	662	684	0.95
19	26	0.00044	0.009	16.9	4.9	1	23	690	712	690	712	0.98
20	26	0.00046	0.0094	16.9	3.7	1	23	718	740	718	740	0.98
21	26	7.3e-05	0.0015	19.4	5.7	1	23	746	768	746	768	0.99
22	26	6.8e-05	0.0014	19.5	2.2	1	23	774	796	774	796	0.96
23	26	0.00024	0.0049	17.8	6.2	1	21	802	822	802	824	0.93
24	26	0.00078	0.016	16.1	3.2	1	23	830	852	830	852	0.98
25	26	9.2e-05	0.0019	19.1	3.3	1	23	858	880	858	880	0.99
26	26	0.0035	0.071	14.1	2.0	1	23	886	908	886	908	0.96

Sequence Information

Coding Sequence: ATGGAAACAACGGTGTTAAACTGTATGAAACCAAATGATAAACTAGATCATATTCCGATCGGAGCAAACAGCAGTAGCTCGATAATGAACGATTCGAGCGTAAAACTAGAAATCAATTTAGATGAAACGTTAGCGAATTTATACAATACTGCGTATGACGAGTACAAATGTCACAATTGTCTACAGTATTTTAGTGACAGAACGAGGCTACAGAATCACCAGTGCGCTCTAAGTGCTCCACAACCAGCTGCGTTACCTCCGCCCCCGCCTCCTCCTCCTCCGCCGCAACCGAGCAACGATGCAcaaaaaaagaacgatattaaaaaattcaactatcagtgtgacgtttgcggcAAATGCTTTAAGGCACCGAGCAAGCTGACAACACATTATCGGTCGCATACCGGTGAACGACCATTTCAGTGCGACATTTGCAGTAAACGATTTTCTCAAAATTGCGACTTGATCAGACACAGACGTCGGCACGTAAGCGATAAACCGTTCCGATGCGACGTTTGTATCAGGTACTTTAATTCAGCCGACGGTTTGAAAATACATCAACGAACTCACACGGGCCAAGAGCACTATCAGTGCGACATCTGCAGCAAACGATTCAGTTACTCCGGCAGCTTGAAGATTCATAAACGTCTACACACaggcgagaaaccgtatcaatgcaGCAAGTGTTACAAATGTTTCACGCAGAAGAGTACGATGAATACACATCGGTGCGGAGATGCGCCCAGAGTCCGTAAGAAGCCGGCACCCGGTACGATAAAAAAACGCACCGAACAGAAACCGTACCTGTGCGACATTTGTTTCAAATGTTTCAGTGCTCCGAGTAAACTGGCCACGCACAAACGGTTTCATACCGGAGAGAAACCGTTTCAATGCGATCTGTGCGACAAAAGGTTTATACAGAACTGTGACTTGACGAGACATAAACGGTTCCACACGGTCGAGAGACCGCATAAATGCGATTCGTGTTCTCGGAGCTTCACGCAGAAATGCGATTTGATCAAACATAAAAAGAATCATGCGAAAAATAAACCTTATAAATGCAATGTatgcaataaatattattcttcGCTGGGCAGCTTGAAAGCACATAAATTGATTCACGACGATAAAAAGTGCTTTCAATGCGATGTCTGTAAAAAGCGTTTCACGTTTTCGAGTAATTTGATCGCTCATAAACGATTACATTTCGGCGAGAAACCGTATGGATGCAAGGTTTGCGGTAAACGATTCGCTCACAAAAACAACTTGAAAATTCATAAGCGGTCGCATAACAAGAACAAACATTATCAGTGCACCGTTTGTGATAAAAACTTTTCCGACTTGAAAGTGTTTAAATCACACAAACAAATGCACGAAGACGATGCGAGCGAAAAACCGTACAAATGCGAAGTTTGTAACGAAGGTTTTGATTTGACGTGCGAACTCAATGCGCACAAGAAATCACacgaaaagaaaaaagacgacGATTTCGTCTCGGACATTAAAGAGGAAAGCGATGACGAAGACGATTTCGTGCTCGCAACATTCATCAATAACGACATGTCGAGCGACGACGAAACGGAACGTAAACCACAAAACGATATGTCGAACGAGAAAATTAAAGAGGAAAGTTCCGCGACTGATTTTCCTAATTCGTTGTTCGAGAACGCCGTAACGATATCGGAAGACAAACTGACGTTCAAAATTAACTTGAAGACGTtggagaaaccgtatcaatgcgaTGTGTGCAGTAAACGTTTCTGTCATTCCAGCAGTTTAAAGAAACATAAATTGAATCATACCGGTCAAAGGACATTCCAATGCGAGTTGTGcgataaaagtttttttcaactGCAGATTTACAAATCGCATCAGCGTCTTCAtaccggagagaaaccgtaccagtgcgaCGTTTGCAGTAAAAGTTTCAGCCAAATGGGCGGTCTGATTTCGCATAAACGTTCACAtaccggagagaaaccgtaccaatgtGAAGTTTGCGATAAGCGATTCGGTCATATCAGTAACCTGTACACGCACAAGCTGTGTCACAACGAAGGCAAACGATACCAGTGCGACATCTGCGCCAAGTGTTTTCGACACTCGACGAGTCTAAATACTCATAAACTCATTCACTCGGGTATAAAACCGCACAAGTGTGACATTTGTTCGAAAGCGTTCTCGAAACTGAATAAACTCAAATCGCATAaacgcgtacatactggtgagaagccgtacAAGTGCGAAATGTGCGACAGATGCTTTTCGCATTTGACAGCGATGCGATCGCATATGCGGTCACACACGGGGGAGAAACCGTACCTCTGCGACGTATGCAGCAAGAGCTTCAGTCAGTTGAACACCCTGAAAACGCATAAACGCACTCATAGCGGGAACAAACCGTATTTGTGCGATGTCTGCGATAAGTGTTTTAACAGCTCGTCGAATTTAAAAACGCATCAGCGTTGTCACACGGGGGAAAAACCGTTTCACTGCGATATGTGCGAGAAACAGTTCTCCCAAAAGAACGCTCTTGTGTCGCATAAACGATcccatacaggagagaaaccgtttcAGTGCGATGTTTGTTACAAATCGTTTTCGTATTCGACATATTTGAAGGAACATAAACGATCGCATACGGGAGAGAAACCACACATGTGCAATATTTGTTACAAACCGTTCAATTACCTAAGTGCGTTGTATACTCATAAACGCGCGCATAAAAAGAATCTTGCGAATGCAGTTGAATAA
Protein Sequence: METTVLNCMKPNDKLDHIPIGANSSSSIMNDSSVKLEINLDETLANLYNTAYDEYKCHNCLQYFSDRTRLQNHQCALSAPQPAALPPPPPPPPPPQPSNDAQKKNDIKKFNYQCDVCGKCFKAPSKLTTHYRSHTGERPFQCDICSKRFSQNCDLIRHRRRHVSDKPFRCDVCIRYFNSADGLKIHQRTHTGQEHYQCDICSKRFSYSGSLKIHKRLHTGEKPYQCSKCYKCFTQKSTMNTHRCGDAPRVRKKPAPGTIKKRTEQKPYLCDICFKCFSAPSKLATHKRFHTGEKPFQCDLCDKRFIQNCDLTRHKRFHTVERPHKCDSCSRSFTQKCDLIKHKKNHAKNKPYKCNVCNKYYSSLGSLKAHKLIHDDKKCFQCDVCKKRFTFSSNLIAHKRLHFGEKPYGCKVCGKRFAHKNNLKIHKRSHNKNKHYQCTVCDKNFSDLKVFKSHKQMHEDDASEKPYKCEVCNEGFDLTCELNAHKKSHEKKKDDDFVSDIKEESDDEDDFVLATFINNDMSSDDETERKPQNDMSNEKIKEESSATDFPNSLFENAVTISEDKLTFKINLKTLEKPYQCDVCSKRFCHSSSLKKHKLNHTGQRTFQCELCDKSFFQLQIYKSHQRLHTGEKPYQCDVCSKSFSQMGGLISHKRSHTGEKPYQCEVCDKRFGHISNLYTHKLCHNEGKRYQCDICAKCFRHSTSLNTHKLIHSGIKPHKCDICSKAFSKLNKLKSHKRVHTGEKPYKCEMCDRCFSHLTAMRSHMRSHTGEKPYLCDVCSKSFSQLNTLKTHKRTHSGNKPYLCDVCDKCFNSSSNLKTHQRCHTGEKPFHCDMCEKQFSQKNALVSHKRSHTGEKPFQCDVCYKSFSYSTYLKEHKRSHTGEKPHMCNICYKPFNYLSALYTHKRAHKKNLANAVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01511012;
90% Identity: iTF_01511012;
80% Identity: -