Basic Information

Insect: Xanthostigma xanthostigma
Gene Symbol: -
Assembly: GCA_963575645.1
Location: OY754466.1:5454726-5459224[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 3.5e-05 0.00072 20.4 0.8 1 23 180 202 180 202 0.98

2 23 1.2e-05 0.00025 21.9 3.6 1 23 208 230 208 230 0.98

3 23 3.3e-06 6.8e-05 23.6 0.7 1 23 236 258 236 258 0.99

4 23 0.0018 0.036 15.0 0.4 1 23 264 286 264 286 0.98

5 23 4.8e-06 9.9e-05 23.1 5.9 1 23 292 314 292 314 0.99

6 23 0.0082 0.17 12.9 2.0 1 23 320 342 320 342 0.97

7 23 0.2 4 8.6 3.4 1 23 348 370 348 370 0.94

8 23 0.00082 0.017 16.1 6.9 1 23 376 398 376 398 0.97

9 23 0.00018 0.0037 18.1 0.2 1 23 404 427 404 427 0.97

10 23 0.00011 0.0022 18.9 0.7 2 23 434 455 433 455 0.96

11 23 5.6e-08 1.1e-06 29.2 1.1 1 23 461 483 461 483 0.99

12 23 0.00034 0.007 17.3 1.4 1 23 628 650 628 650 0.96

13 23 3.9e-06 8e-05 23.4 2.1 1 23 656 678 656 678 0.98

14 23 1e-05 0.00021 22.1 0.3 1 23 683 705 683 705 0.99

15 23 0.00043 0.0088 17.0 1.5 1 23 711 733 711 733 0.96

16 23 2.3e-05 0.00046 21.0 3.1 1 23 739 761 739 761 0.99

17 23 0.67 14 6.9 1.3 1 23 767 789 767 789 0.97

18 23 0.035 0.72 10.9 5.7 1 23 795 817 795 817 0.93

19 23 0.0062 0.13 13.3 4.7 1 23 823 845 823 845 0.98

20 23 5.2e-06 0.00011 23.0 0.1 1 23 851 873 851 873 0.97

21 23 0.0084 0.17 12.9 0.2 2 23 880 901 879 901 0.97

22 23 0.00043 0.0088 17.0 4.1 1 23 907 930 907 930 0.98

23 23 7.9e-06 0.00016 22.4 2.2 1 23 936 958 936 958 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	3.5e-05	0.00072	20.4	0.8	1	23	180	202	180	202	0.98
2	23	1.2e-05	0.00025	21.9	3.6	1	23	208	230	208	230	0.98
3	23	3.3e-06	6.8e-05	23.6	0.7	1	23	236	258	236	258	0.99
4	23	0.0018	0.036	15.0	0.4	1	23	264	286	264	286	0.98
5	23	4.8e-06	9.9e-05	23.1	5.9	1	23	292	314	292	314	0.99
6	23	0.0082	0.17	12.9	2.0	1	23	320	342	320	342	0.97
7	23	0.2	4	8.6	3.4	1	23	348	370	348	370	0.94
8	23	0.00082	0.017	16.1	6.9	1	23	376	398	376	398	0.97
9	23	0.00018	0.0037	18.1	0.2	1	23	404	427	404	427	0.97
10	23	0.00011	0.0022	18.9	0.7	2	23	434	455	433	455	0.96
11	23	5.6e-08	1.1e-06	29.2	1.1	1	23	461	483	461	483	0.99
12	23	0.00034	0.007	17.3	1.4	1	23	628	650	628	650	0.96
13	23	3.9e-06	8e-05	23.4	2.1	1	23	656	678	656	678	0.98
14	23	1e-05	0.00021	22.1	0.3	1	23	683	705	683	705	0.99
15	23	0.00043	0.0088	17.0	1.5	1	23	711	733	711	733	0.96
16	23	2.3e-05	0.00046	21.0	3.1	1	23	739	761	739	761	0.99
17	23	0.67	14	6.9	1.3	1	23	767	789	767	789	0.97
18	23	0.035	0.72	10.9	5.7	1	23	795	817	795	817	0.93
19	23	0.0062	0.13	13.3	4.7	1	23	823	845	823	845	0.98
20	23	5.2e-06	0.00011	23.0	0.1	1	23	851	873	851	873	0.97
21	23	0.0084	0.17	12.9	0.2	2	23	880	901	879	901	0.97
22	23	0.00043	0.0088	17.0	4.1	1	23	907	930	907	930	0.98
23	23	7.9e-06	0.00016	22.4	2.2	1	23	936	958	936	958	0.98

Sequence Information

Coding Sequence: ATGGAAACAGCTATAGTAAATGTGGATAATTTAAGTGTGCTTTGTAGAGTATGTCTATCAAAAGATGTTAACTCAACTAACATATTCACGTTTGTAACCCAATTTGGTTGTGAAATAGCAACAGCTATTGTAAAATGCGCTCCCGTTCATatatCTAAATATGACGGAATGCCAACCTACATATGTCAAAAGTGTTACGACACACTAAGTACAGCTTACGACTTTCAAGCAAAGGCTGTGAGCACTGAAAACACTcttctaaaattaaataaaaactcttGTTCTGTTAAAATTGAAACGATCGATTCAATTCCTGATTCAGTGACAAACTCCGCGTCAAATCTATGCGACATTAAAATTGAAGAAACGGATGAAAAAGAGCTTTCAAGCTCGAAAATTAAATCTACTTTTGAAGAAATCGAACCTCCCGACGACATTTCTAATAGTTCTGAAAATAATGACGTTGCAGAAACTACAATAGTAAACAGTAAAAAACGACCGAAAAATGTCCGATTAAAAAACAGTGTCAAAAATGATTACAGCTGTGATATTTGCGCCAAATCATTTTCGAAATCAGCATATTTAAAAAtccacaaacgtatacataccgtTGAGAAATCTCAtaaatgtgatatttgtaataaaagttTTACGCAACGGGCGTACTTAAAATTGCATAAACGCGTTCATTCTGAAGTAAAACCTTTTCAATGTGATATGTGTGACACCAGCTTTAGTGAATTACGCAACTTAATCAGACATCAACGTATTCATTCAGGTGAGAAACCGTTCCACTGTGACGTGTGCAACAAAGGTTTCATAGGAGCCGAAGGGCTAAAATTGCATAAACGTGTTCATTCGGACGAGCGACCTTACCAGTGCGACGTTTGCGGCAAATGTTTCAGGCAAAGAGTTCATTTGAAAacacacaaacgtatacattcaggagagaaaccgtatagATGCGCAGATTGTGATGTCTGTTATAGAACTTTGGATGGTCTTTATAAACATAAAGTTAAACATACCAGTGAGAAGCGACACCAGTGCGATGAATGCGGCGAATGTTTTTTATCATCAACAAAGCTGAATTATCATAAAGCTGAACATTCCGGTTTGAAATTGTTCCACTGCAATCTCTGCGATAAATCTTTTTCGAAACAACAAAGTTTAAAGCACCATACAAatctacatactggtgagaaaccgtatcaatgtgctGTTTGTTTAAAGAGATTCGCACAGCCTTCTGGACTGAGAACGCATCAAGTGACGACGCATTCTGGGAAAAAAACGTGCAAGTGTGACATTTGCGGGATGGGTTTCGCGTATCCTAATAATTTGATAATTCATAAACGAAAGCATTccggagagaaaccgtatcagtgcgaTGTATGCGATTGGAGGTTTCCTAATTCGTATAACTTAAAACGACATCAGCGGACACATTCGGGGGAAAAGTCGTTTAATTGCGATATAACTGAAAATGATGGCAAGCCAAACTTTATATGCCAGGTTTGTTATAGTATGCTACATGCCGCCTATGAATTTCAAATAAAGGCTGTACACACTGAATACAGTCTCCAAAAATTAGATCAAGTTGACTACGCTAGTTCTGTTAAAATCGAAATATTTGATCCGAGTTCTCTTGACTTTAATAATACTGCAAATCTCGCGTCTATcgatttttctgatattaaaatAGACGATCAAATTCATGACGAAACCGAAGCGACAAGAAGCCCAGAAATAGAATGTAGTTTTGAGGAAACAGAACCTTATTTTGACGATGAAAAAACTGAAAACGCAGTTCGTTTGGAAAAAACAAAAAGTCCTAAACAAGCCAAAAAGGTTCGAAAAAAAAGCGGAGTTGCGGGAGATTACCGTTGCGAAATTTGCGATAAAAGCTTTgcgaaatattattatgtaaaaagacACAAAGTTATTCATAACAGTGAGCGACCATTTAAGTGTGACATTTGCGACAAATCATTCACTCGTCAAGCGTATTTCAATATTCATAAACGACTTCATGGCGAGAAACCGTTTAAATGCAGCGAGTGTCCAGCGAGTTACATTCGAGTAGACAACTTGACCAGACACCAAAGAATTCATTCAGGAGAAAGGCCTTTCCAGTgcgacatttgtaaaaaatgtttcatggaTTCAAGAGGACTTAATGCTCATAAAGTtattcatactggtgagaaaccgtatcaatgtgacgtaTGCAGCAAGCGATTTAGACAAAAACCGCACTTAATCACTCATAAACGTATACATACAGGCGAGAAGCCATATAAATGCATGAGCTGTGATGCATTCTTTCGAAATTTAGCTGATCGCGACAGACACAAACTTAAACATACCAACgaaaaaccgtatcagtgcGATGAGTGCGGTAAATGTTTTACTACGCTGAATGTATTGAAATGTCATAAACTGAGACATGCCGGCGTCAAAGAGCACCAGTGTCAGTTTTGTGAGAAAATGTTCATAACGCATCAGCTACTGAAATATCACATAaatatacatactggtgagaaaccgttccAGTGTGTTGTTTGTGGAAAACGATTCGCGCAGCCGTCTTCGTTGACTATACATCAAGTTTCGCATAACGAGAAAAAATCGGTTGAATGCGATGTCTGCGGTAAACTTGTTTCGTCCGCTAAAACTCTATTGATTCATAAACGAAAACATTCGGGGGAGAAACCGTTTCAATGCACCGTATGCGGGTGGAGGTTTACTTGTCTGCAAAACTTAAAAAGACATCAGAAAACGCAACATACTGGGGAGATACATTTTACGTGCGATGTCTGCGATAaagattttacaaacaaaacGAACTTGAATATACATAAGAAGAAACATGGAATAatttttccttaa
Protein Sequence: METAIVNVDNLSVLCRVCLSKDVNSTNIFTFVTQFGCEIATAIVKCAPVHISKYDGMPTYICQKCYDTLSTAYDFQAKAVSTENTLLKLNKNSCSVKIETIDSIPDSVTNSASNLCDIKIEETDEKELSSSKIKSTFEEIEPPDDISNSSENNDVAETTIVNSKKRPKNVRLKNSVKNDYSCDICAKSFSKSAYLKIHKRIHTVEKSHKCDICNKSFTQRAYLKLHKRVHSEVKPFQCDMCDTSFSELRNLIRHQRIHSGEKPFHCDVCNKGFIGAEGLKLHKRVHSDERPYQCDVCGKCFRQRVHLKTHKRIHSGEKPYRCADCDVCYRTLDGLYKHKVKHTSEKRHQCDECGECFLSSTKLNYHKAEHSGLKLFHCNLCDKSFSKQQSLKHHTNLHTGEKPYQCAVCLKRFAQPSGLRTHQVTTHSGKKTCKCDICGMGFAYPNNLIIHKRKHSGEKPYQCDVCDWRFPNSYNLKRHQRTHSGEKSFNCDITENDGKPNFICQVCYSMLHAAYEFQIKAVHTEYSLQKLDQVDYASSVKIEIFDPSSLDFNNTANLASIDFSDIKIDDQIHDETEATRSPEIECSFEETEPYFDDEKTENAVRLEKTKSPKQAKKVRKKSGVAGDYRCEICDKSFAKYYYVKRHKVIHNSERPFKCDICDKSFTRQAYFNIHKRLHGEKPFKCSECPASYIRVDNLTRHQRIHSGERPFQCDICKKCFMDSRGLNAHKVIHTGEKPYQCDVCSKRFRQKPHLITHKRIHTGEKPYKCMSCDAFFRNLADRDRHKLKHTNEKPYQCDECGKCFTTLNVLKCHKLRHAGVKEHQCQFCEKMFITHQLLKYHINIHTGEKPFQCVVCGKRFAQPSSLTIHQVSHNEKKSVECDVCGKLVSSAKTLLIHKRKHSGEKPFQCTVCGWRFTCLQNLKRHQKTQHTGEIHFTCDVCDKDFTNKTNLNIHKKKHGIIFP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -