Xxan022701.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754475.1:18295909-18307808[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.1 2 9.5 0.8 1 13 155 167 155 169 0.89
2 26 7.2e-06 0.00015 22.6 1.3 1 23 405 427 405 427 0.99
3 26 0.86 18 6.6 6.9 1 23 433 455 433 455 0.97
4 26 0.0002 0.0041 18.0 2.6 1 23 461 483 461 483 0.98
5 26 0.00034 0.007 17.3 5.2 1 23 489 511 489 511 0.98
6 26 2.2e-05 0.00044 21.0 0.6 1 23 517 539 517 539 0.98
7 26 0.00017 0.0035 18.2 3.0 1 23 545 567 545 567 0.98
8 26 0.0014 0.028 15.4 2.2 1 23 573 595 573 595 0.98
9 26 0.00081 0.017 16.1 3.0 1 23 601 623 601 623 0.98
10 26 2.2e-05 0.00044 21.1 0.9 1 23 743 765 743 765 0.97
11 26 1.3 27 6.0 2.5 1 17 771 787 771 788 0.94
12 26 0.0011 0.022 15.7 3.4 1 23 799 821 799 821 0.98
13 26 0.00037 0.0076 17.2 5.8 1 23 827 849 827 849 0.98
14 26 0.00012 0.0025 18.7 2.3 1 23 855 877 855 877 0.98
15 26 8.7e-05 0.0018 19.1 2.1 1 23 883 905 883 905 0.98
16 26 6.3e-05 0.0013 19.6 0.6 1 23 911 933 911 933 0.99
17 26 1.1e-05 0.00023 22.0 1.0 1 23 939 961 939 961 0.99
18 26 0.00011 0.0022 18.8 1.9 1 23 990 1012 990 1012 0.98
19 26 4.9e-05 0.001 19.9 6.0 1 23 1175 1197 1175 1197 0.99
20 26 1e-05 0.00021 22.1 1.8 1 23 1203 1225 1203 1225 0.98
21 26 3.7e-06 7.6e-05 23.5 5.1 1 23 1231 1253 1231 1253 0.98
22 26 3.6e-05 0.00073 20.4 1.2 1 23 1259 1281 1259 1281 0.99
23 26 3.3e-06 6.7e-05 23.6 4.6 1 23 1287 1309 1287 1309 0.98
24 26 1e-05 0.00021 22.1 0.6 1 23 1315 1337 1315 1337 0.99
25 26 6.3e-06 0.00013 22.7 3.3 1 23 1343 1365 1343 1365 0.99
26 26 0.00021 0.0042 18.0 1.1 1 23 1371 1393 1371 1393 0.99

Sequence Information

Coding Sequence
ATGAATGTCAACAGGGAAGAAAATTCGCCTGTGAATTTGAACGAAATGACTAatgaaatcattttaaaatctgaaatcaaagatGAACCGATGGATCCACTGTTTGCTGTTGAAACAGTAGAAACTCTATCCAAATACGATGACGAGGATTCAAAGACTGGAATCGGGGACTCTAAAATAGGTGTAGACATCAACTGGAAAGAGACAGGATCTGCTGCCTTTAATTCAACAAATCAAATTAGGGAAGGAATGTTtataaaatccgaaatcaaggAAGAACCGATAGATGATAATTCCATATTTTTACCAGAATATGTTGATAATACAGGAAACGCTTCACCAAACGGTGACGTCATTGAGAACAGTCGCGAAGACACACAATCAGATATTGGTCAGAAGTCAGCGATTCAgaatataaatgatttaaatagacacaaacgcGTACATTCTGGCAATAAACAATATCAGTGTAACATTTGTGAAAAGACTTTCAGGGATACAGACTATGCTGATAAAACAGTAGAACCTTTACTCAAATATGATAATAGTGAATTCAACACTGAGGACTCAAAGATCGAAATTGAGGACACAAAAATAGGAATTCCAACTTTAGAATCCACAGACAATTTTAACGAAGGAAtattaaaatctgaaataaaaaatgaaccgGTAGATGGTAGATCATCCATATATTTACCAGAATATGTGGATCAGCCTTTAAATGTGTCTACCAAAactatacatactgCAAACAAAatgaataatgaaatatttttaaaaacggaaaTCAAGGACGAACCGGTGGATGATTGTGATGACACAGTAGAAACTTTATCTCAATGCGATGTTTCACAGATCGATATTGAGGACACTAAACGAAGTGTAGAACTAGATAGCAACTGGAAAGAGACAGAAACTGTcacttttaattcaattaaCGAAATTACGGAAGGTATGTTCATAaaatccgaaataaaaaatgaaccgTTGGACGTAAATTCGTCCGTATTTTTACCAGAATATGTTGACGTACCAGTAAACATTGACGACAGTAAGAGTAACTGCAAAGACATTAAAGTATCGGAGAACTCACATTCTATCAATTTAGTTATAACTGATGAGAAACCAGATAAAAATGACGTTTGTTTCAAGAGTTTTTCGTATGACAGTCATTCAAATACTCATAAACTTAAACATACTGGAGTAAAACGATAtaagtgtgacatttgtgaCAACAGTTATACTAGATCATCAGATTTAAAAAGGCACAACCGCGTCcatacaggtgagaaaccttatcagtgtgacgctTGTAGCGAATGCTTCCAGCAATTGAGCCATTTGCATACTCACAAGTTTGTACATACTGGGGAAAAACCGCATCAGTGcgacgtttgtaaaaaattctttgtaaCATCAGCACTATTAAGGAAACATAATCGCATTCATACGAGTGTGAAATTATATAAATGCGACGTTTGCAATAAgagttttaaacaaataaatcatttaaaCCATCACAAgcttatacatactggtgagaagccgtatcagtgtgacgtttgcgatAAGCGTTTTAATCAGATAGGTAATTTAACGACTCACAATCGTATACATACGGGTGAAAAACCGTACCAGTGcaacgtttgtaaaaagtgcttcGGTATATCATCAGAGCTAAAGAGACACAATcgggtacatactggtgagaaaccatatacgTGTGACGTTTGTGAAAAGCATTATTTGACACCATCGGACTTGAAGAGACATTATCGCCtccatactggtgaaaaaccatatcagtgtgatttTTGTAAAGAATGCTTTTCTCGGTCAGAAGATCGAAAGAAACACATTGCAGTTCATACTGCAAACAAAatgaataatgaaatatttttaaaaacggaaaTCAAGGACGAACTGGTGGATGATGGTGATGACACAGTAGAAACTTTATCTAAATGTGATGTCTCACAGATCAATATTGACACTAAACAAAGTGTGGGACTAGATAGCAACTGGAAAGAGACAGAAACTGTcacttttaattcaattaaCGAAATTACGGAAGGTATGTCCATAaaatccgaaataaaaaatgaaccgTTGGACGACAATTCGTCCATATTTTTACCAGAATATGTTGACGTACCAGTAAACGCTCCGTCTAGCGTTGACAGTCATTCAAATACTCATAAACTTATACATGCTGGAGAGAAACGATAtaagtgtgacatttgtgaCAACAGTTATACTAGATCATCAGATTTAAAAAGGCACAGCCTCGTCcatacaggtgagaaaccttatcagtgtgacgctTGTAGCAAATGCTTCCAGCAATTGAGTCATCTGCATACTGACAAGTTTGTACATACTGGGGAAAAACCGCATCAGTGcgacgtttgtaaaaaattctttgtaaCATCAGCACTATTTAGGAAACATAATCGCATTCATACGAGTGTGAAATTATATAAAtgcgacgtttgtaataagagttttaaacaaatgaatcaTTTAAACCATCACAAgcttatacatactggtgagaagccgtatcagtgtgacgtttgtaataagcgttttAATCAAATAGGTCATTTAACGACTCACAATCGTATACATACGGGTGAAAAACCGTACCAGTGcaacgtttgtaaaaagtgcttcGGTATACCATCAGAGCTAAAGAGACACAATcgggtacatactggtgagaaaccatatcagtgtgacgtttgtagagAGGGATTTATTACATCAGTGTATTTAAAAAGACATTATCGGGTCCATACGGATGCAAAAGCGTACCAGTgcgacatttgtaataaatgctTTGGTATACCATCAGAGTTAAAGAGACATGAACGGGTTCATACTAGTAAGAAACCATATGAGGGTGACGTTAGTAGAGATGGCTTCATTACGTCAGCAAAAAGCACACATGCGGGTGAAAAatcataccagtgtgacatttgtaaagaGTGTTTTTCTCGATCTGAAGATCGAAAAAAACACATTGCAGTTcatgCAAACAAAATGAATAatgacgtatttttaaaatccgaaatcaaagacgagCCGATGAATGACAATTCTTTGTTTCCAACCGATCATACTGATGACACAGTAGACTCCAAATGTGATGATAGTGAAGTCAACTGTAGTGTGAGTGGGGACACTAAAAAAAGTTTAGAGATCGGTATCAATAGGAAACAGACAGAAAACCAAATTGACGAAGGAATATCaataaaatctgaaatcaagAGTGAACCGATTGATGATTATTCGTGTATATTTTTACCAGAATATGTTGATAACACATCAGACCCCTCGTCTGACGTTGACAGCGTTGAAATCAGCTACAAGGACATAAAAACAGATATTGAGCAGACATCGGACAGCTTCGTGAATTGCCGTTCTTCTGAGGAGACAAAGTGTTTTGATAAATCTGAAGAGGAATTCAAAAATCCTTCAGTAAATACTGAGAAAtctaaaaaacaaattgaaacaaactatcagtgtgacgtttgtaaaaagagTTTTAGTCATGCGCATAAATTGACAGTTCACAAACGTACTCATAATGAGgtgaaaccatatcagtgtgacgtttgtactAAAAGTTTTAATCAAGCCGGTCATTTAACAAGACACAAACTTATACATACCGGCgtgaaaccatatcagtgtgacgtttgtaaaaaatgcttCAGTAGATCGTCAGACTTAAAGACACACTATCGTTTGCACACTggggagaaaccgtatcagtgtgatttttgtaaaaaaagttacaaggatataagcaatttaatagttcacaaacgtatacacactgaagagaaaccataccaatgtgacgtttgtaaaaaatgctttaGTAGATCGTCAGAGTTAAAGAAACACAATCGTGTACATACTGGAgaaaaaccgtatcagtgcGACGTTTGTAAGAAGAATTTTCGTGATATAAGCAATTTGATAGTTCACAAACGTGTGCACACAGACGAGAAACCATTtcggtgtgacgtttgtaaaaaatgttttggccGATCATCACTCTTAAAGACGCACATTCGggtgcatactggtgagaaaccatatcggtGTGACGTCTGTAAAAGAAGTTTCAGTGCTATAAGCAATTTTATAGTTCACAAACGTACGCACACTGATGAGAAACCAtcttag
Protein Sequence
MNVNREENSPVNLNEMTNEIILKSEIKDEPMDPLFAVETVETLSKYDDEDSKTGIGDSKIGVDINWKETGSAAFNSTNQIREGMFIKSEIKEEPIDDNSIFLPEYVDNTGNASPNGDVIENSREDTQSDIGQKSAIQNINDLNRHKRVHSGNKQYQCNICEKTFRDTDYADKTVEPLLKYDNSEFNTEDSKIEIEDTKIGIPTLESTDNFNEGILKSEIKNEPVDGRSSIYLPEYVDQPLNVSTKTIHTANKMNNEIFLKTEIKDEPVDDCDDTVETLSQCDVSQIDIEDTKRSVELDSNWKETETVTFNSINEITEGMFIKSEIKNEPLDVNSSVFLPEYVDVPVNIDDSKSNCKDIKVSENSHSINLVITDEKPDKNDVCFKSFSYDSHSNTHKLKHTGVKRYKCDICDNSYTRSSDLKRHNRVHTGEKPYQCDACSECFQQLSHLHTHKFVHTGEKPHQCDVCKKFFVTSALLRKHNRIHTSVKLYKCDVCNKSFKQINHLNHHKLIHTGEKPYQCDVCDKRFNQIGNLTTHNRIHTGEKPYQCNVCKKCFGISSELKRHNRVHTGEKPYTCDVCEKHYLTPSDLKRHYRLHTGEKPYQCDFCKECFSRSEDRKKHIAVHTANKMNNEIFLKTEIKDELVDDGDDTVETLSKCDVSQINIDTKQSVGLDSNWKETETVTFNSINEITEGMSIKSEIKNEPLDDNSSIFLPEYVDVPVNAPSSVDSHSNTHKLIHAGEKRYKCDICDNSYTRSSDLKRHSLVHTGEKPYQCDACSKCFQQLSHLHTDKFVHTGEKPHQCDVCKKFFVTSALFRKHNRIHTSVKLYKCDVCNKSFKQMNHLNHHKLIHTGEKPYQCDVCNKRFNQIGHLTTHNRIHTGEKPYQCNVCKKCFGIPSELKRHNRVHTGEKPYQCDVCREGFITSVYLKRHYRVHTDAKAYQCDICNKCFGIPSELKRHERVHTSKKPYEGDVSRDGFITSAKSTHAGEKSYQCDICKECFSRSEDRKKHIAVHANKMNNDVFLKSEIKDEPMNDNSLFPTDHTDDTVDSKCDDSEVNCSVSGDTKKSLEIGINRKQTENQIDEGISIKSEIKSEPIDDYSCIFLPEYVDNTSDPSSDVDSVEISYKDIKTDIEQTSDSFVNCRSSEETKCFDKSEEEFKNPSVNTEKSKKQIETNYQCDVCKKSFSHAHKLTVHKRTHNEVKPYQCDVCTKSFNQAGHLTRHKLIHTGVKPYQCDVCKKCFSRSSDLKTHYRLHTGEKPYQCDFCKKSYKDISNLIVHKRIHTEEKPYQCDVCKKCFSRSSELKKHNRVHTGEKPYQCDVCKKNFRDISNLIVHKRVHTDEKPFRCDVCKKCFGRSSLLKTHIRVHTGEKPYRCDVCKRSFSAISNFIVHKRTHTDEKPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-