Xxan022527.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754475.1:16684129-16688699[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 2.1e-05 0.00044 21.1 3.3 1 22 238 259 238 259 0.96
2 27 0.031 0.65 11.1 0.4 2 23 267 288 266 288 0.97
3 27 1.8e-05 0.00037 21.3 6.5 1 23 294 316 294 316 0.99
4 27 8.2e-06 0.00017 22.4 4.3 1 23 322 344 322 344 0.99
5 27 0.00018 0.0037 18.1 5.6 1 23 350 372 350 372 0.99
6 27 8.6e-07 1.8e-05 25.5 2.1 1 23 378 400 378 400 0.99
7 27 1.6e-05 0.00034 21.4 2.9 1 23 406 428 406 428 0.99
8 27 4.2e-06 8.6e-05 23.3 2.6 1 23 434 456 434 456 0.98
9 27 0.0026 0.052 14.5 2.2 1 21 577 597 577 598 0.93
10 27 0.0032 0.065 14.2 1.4 1 23 605 627 605 627 0.98
11 27 0.033 0.68 11.0 6.7 1 23 636 658 636 658 0.99
12 27 6.3e-06 0.00013 22.7 1.9 1 23 664 686 664 686 0.99
13 27 0.00057 0.012 16.6 4.9 1 23 692 714 692 714 0.98
14 27 4.1e-05 0.00084 20.2 2.2 1 23 720 742 720 742 0.99
15 27 0.00028 0.0058 17.5 1.8 1 23 748 770 748 770 0.99
16 27 0.0004 0.0082 17.1 5.5 1 23 776 798 776 798 0.98
17 27 0.002 0.04 14.9 2.0 1 21 919 939 919 940 0.93
18 27 0.019 0.38 11.8 5.9 1 23 947 969 947 969 0.98
19 27 0.0085 0.17 12.9 6.9 1 22 1096 1117 1096 1117 0.95
20 27 0.00012 0.0024 18.7 0.5 2 23 1125 1146 1124 1146 0.97
21 27 1.5e-06 3e-05 24.7 3.5 1 23 1152 1174 1152 1174 0.99
22 27 1.4e-05 0.00028 21.7 3.3 1 23 1180 1202 1180 1202 0.98
23 27 0.00011 0.0023 18.8 3.0 1 23 1208 1230 1208 1230 0.99
24 27 0.039 0.8 10.8 6.9 1 23 1236 1258 1236 1258 0.98
25 27 6.6e-07 1.4e-05 25.8 1.5 1 23 1264 1286 1264 1286 0.99
26 27 3.6e-06 7.5e-05 23.5 2.9 1 23 1292 1314 1292 1314 0.99
27 27 0.00059 0.012 16.5 6.1 1 23 1320 1342 1320 1342 0.97

Sequence Information

Coding Sequence
ATGCTCGATGTGTTTCGATTTTCTACCAGATTTGAAGACAAAGTCGTTGATGTGATAATGAAGTGTGCTCCTGTACAGGTACTGAGATACGATGAGATGCCGAAATTCGTATGTCGAAAATGTCTTACTAAACTAGAGGAAATGCGTCAGTTCCAAATGCAAATAATACAGTCTGACAAAACACTACGACGCTATTTACAGCAACTGCATGCTTCTGATAATGAACGCCGGATCGAGAGTTCTATTCAAAGGTCAAATGATTCTTCAATCGTTAATACTGATGCAGACATCAAGTATGATTCTACAGTACTTCATGACGTGTTTAACTTGAATGTCAACTGGAGAGAAAAAGAATGTGAGAACTTTAGTTCGGAAAGCAAAAATAACGataaaatgtctttaaaatacGAAATAAAAGTAGAACAAATAGACAAGAATACAATAACGCTACCAGATTGTGCTGATGATCTCTTAGACATTTGGTCTAAAGGTGATGAGTTCACTGATATCAATATTGGCGAGAGGAAGATGGAAACAACTTTGACTATTAACTCAACATGcaaaaacattgaaattaaaCCCGAAATCAAAAAGGAACCGATAGATGATGAATTGATAATGAACACAGAAAATGTTTCATCTAACAattattctgacagtgaaatCAACAATGACAACATGAAGATTGATATTGACCTCATTTCGGAAAACTATTCTTGTGagatttgtaataagtgtttcattaATTCAGATGACCTTAAAAATCATATGTGTACTGTCACTGGAGAGAAACTGATTCAATGTGAGATTTGTAATAGGTTTATCTCCGGCTatgaaaatttcattaaacataaacgtatacataccgacgctaaaccatatcagtgtgacatgtgTGATAAGTGTTTCGCGCACAAATATCAATTAAATGAACACAAACGTACGCATACTGGGGAAAAACCATATAAAtgtaacgtttgtaataagtgcttCGCTCATGCTGATGGTTTGAAAAAACACACACGTgtgcatacaggagagaaaccatataAATGTGACATGTGTATTAAGTCTTTCTCTCAGTCAAACCATTTAAAGCGACATAAACGTACACATTCTGGTGAGAAGCCGTATCGGTGTGACGTTTGTGGTAAGTGTTTCACACAGCCAGGAAATTTAGTTAGTCACAAACGTAAGCATACTGGAGACCAAAATTATCAATGCCACATTTGTAATAAAAGTTTCATTGAGTCAAATAGCGTGAAACGTCATATGCGTctacatactggagagaaaccgtaccaatgtgacgtttgtgatAAATGTTTTACACAAGCATCTGATTTAAGTAAACACAAACTTTCCCATGTTGGAGAAGAACCAAACAAATATTTAGATATCAATGTTGGTGAGAGTAAAGCGGAAGCACCTGCCAATTTTGAATCGGAAACCAAAAGTATTGaggaaatatatttaaaatccgAAATAAAAAACTCGTCGATATATAATAATGAATCAATAATTCAAACAGAATCAACTGTGGACACACAAAATACTACATTTAACGATTGCGGTAGTGAAATCAACAATGGTGACTTACATAttgatttacacggtacttcgGGGAACTCTGCGTGTGTTCGTTCTACCGATGTAGAAAACATTATTGAGAATTGTGAAGACAAAGAAATCTCGGTAACTTTATCACAATCAGTGGGCAAACGTAGGCACTCTTGTAAAATTTGTGACAAGTATTTCGCAAATTCAAATGACTTGCAAAGTCATGTGTGTTCTGATACCGGAGAGAAACCATTTCAGTGTGATATATGTAATAACTTTTTCGCCGTTTATGAACACTTGATTAATCATAAACGGATACATACCGACGATGAACCGTATAAACCATATAAGTGTAACCTTTGTAACAAGTGTTTCTTATGGCCTTCccatttaaataaacacaaacgtacccatactggagagaaaccatatcaatgtgacatttgtaataagtgtttcgctCGAGCTGATGGTTTGTATAAACACAAACGtgtacatacaggagagaaaccacataagtgtgacatttgtaataaatctTTCGCCCTTTCTGGTTGTTTGAAAaaacacaaacgtatacatacaggagagaaaccatatcgatgtgacatttgtaacaaGTGTTTTGCTATTGCAGATACCTTGAAAAAACACAAACGTGTGCATACAAGAGAGAAACCATAtcgatgtgacatttgtaacagGTGTTTTGCTATTGCAGAAACTTTGAAAACACACAAACGTGTACATACAagagagaaaccatatcaatgtgacatttgtatgAAGTGTTTTACTCGTTCATATCAATTAAGAAAACACAAACTTTCCCATACTGGAGAAAACCCAAATGAATATTCAAGTATCAATGTTAGCGAGAGTAAAGCGGAAACGCCTGCCATTTTTAAATTGGAAACCAAAAGTATTGAGGACATAtatttaaaatccgaaatcaaagacACGCCGATATATGATAACGAATCATTCATTCCAACAGAATTCATTGCGGACACACAAAATACTACATTTAACGATTGCGGTAGTGAAATCAACAATGACGACATATATATTGATTTACACCATACTTCGGGGAACTCCGCGTGTGTTCGTTCTACCGATGTAGAAAACATTATTGAGAATTGTGAAGACAAAGAAATTTCGGTAACTTTATCACAATCAGTAGGCAAACGTAGGCACTCTTGTAAAATTTGTGACAAGTATTTCGCTAATTCAAATGACTTGAAAAGTCATGTGTGTATTGATACCGGAGAGAAATCATttcagtgtgatatttgtatGACGTGTTTTGCTCATTCATATCAATTAAGAAAACACAAACTTTCCCATACTGGAGAAAAACCAAATGAATATTCAGCTATCAATGTCGGCGAGAGTAAAGCGGAAGCACCTGCCATTTTTAAATTGGAAACCAAAAGTATTGaggaaatatatttaaaatccgaaatcaaagacACGCCGATATATGATAACGAATCATTCATTCAAACAGAATTCATTGCGGACACACAAAATACTACATTTAACGATTGCGGTAGTGAAATCAACAATGACGACATATATATTGATTTACACCATACTTCGGGGAACTCCGCGTGTGCTCGTTCTACCGATGTACAAAACATTATTGAGAATTGTGAAGACAAAGAAATTTCGGTAACTTTATCACAATCAGTAGGTACACGTAGGCATTCTGAAGATAAGCTGTATCCTTGTAAAATGTGTAGTAAGTGTTTCGTTAATTCAGATTGCTTGAAAAAGCACGTGTGTACTGTCACTGGAGAGATACTAATTCAATGTGAGATTTGTAATAGGTTTTTCTCCGgctatgaaaatttgattaaacataAACGCGTACATACTGACGctaaaccatatcagtgtgacatttgtgataAGTGTTTCGCGCAAAAAGCTCATTTAATCGTccacaaacgtacacatactgggGAAAAACCACATCAAtgtaacatttgtaataagtgcttCGCTCTTGCTGATACTTTGAAAAAACACATACGCgtgcatacaggagagaaaccatatcaatgtgacatttgtaagaagtgtttcgcTTTTGCTGATAGTTGGAAAAAACACAAACGtgtacatacaggagagaaaccacatcaatgtgacatttgtatgAAGTGTTTCGCTGAAATTTCGCATTTGAAATCTCACAAACGTACACATTCTGGTGAGAAGCCGTATCGGTGTGACGTTTGTGGTAAGTGTTTCACACAGCCAGGAAATTTAGTTATTCACAAACGTAGACATACTGGAGACCGACGTTATCAATGCCACATTTGTAATAAAAGTTTCATTGAGTCATATAGCTTGAAACTTCATATGCGTctacatactggagagaaaccgcaccaatgtgacgtttgtgatAAATGTTTCACACATGCAGTTAGCTTAAGTAGACACAAACTTTCCCATGCTGGAGAAGAACCAAACGAATATTCAGATATCGATGTTGGCGAAACTAAAGTGGAAGCACCTGTCAATTTTGAACCGGAAACCAAAAGTATTGATGAAACAAATTTGAAAGTTGAAATCAAAGACACGGcgatatttgataattaa
Protein Sequence
MLDVFRFSTRFEDKVVDVIMKCAPVQVLRYDEMPKFVCRKCLTKLEEMRQFQMQIIQSDKTLRRYLQQLHASDNERRIESSIQRSNDSSIVNTDADIKYDSTVLHDVFNLNVNWREKECENFSSESKNNDKMSLKYEIKVEQIDKNTITLPDCADDLLDIWSKGDEFTDINIGERKMETTLTINSTCKNIEIKPEIKKEPIDDELIMNTENVSSNNYSDSEINNDNMKIDIDLISENYSCEICNKCFINSDDLKNHMCTVTGEKLIQCEICNRFISGYENFIKHKRIHTDAKPYQCDMCDKCFAHKYQLNEHKRTHTGEKPYKCNVCNKCFAHADGLKKHTRVHTGEKPYKCDMCIKSFSQSNHLKRHKRTHSGEKPYRCDVCGKCFTQPGNLVSHKRKHTGDQNYQCHICNKSFIESNSVKRHMRLHTGEKPYQCDVCDKCFTQASDLSKHKLSHVGEEPNKYLDINVGESKAEAPANFESETKSIEEIYLKSEIKNSSIYNNESIIQTESTVDTQNTTFNDCGSEINNGDLHIDLHGTSGNSACVRSTDVENIIENCEDKEISVTLSQSVGKRRHSCKICDKYFANSNDLQSHVCSDTGEKPFQCDICNNFFAVYEHLINHKRIHTDDEPYKPYKCNLCNKCFLWPSHLNKHKRTHTGEKPYQCDICNKCFARADGLYKHKRVHTGEKPHKCDICNKSFALSGCLKKHKRIHTGEKPYRCDICNKCFAIADTLKKHKRVHTREKPYRCDICNRCFAIAETLKTHKRVHTREKPYQCDICMKCFTRSYQLRKHKLSHTGENPNEYSSINVSESKAETPAIFKLETKSIEDIYLKSEIKDTPIYDNESFIPTEFIADTQNTTFNDCGSEINNDDIYIDLHHTSGNSACVRSTDVENIIENCEDKEISVTLSQSVGKRRHSCKICDKYFANSNDLKSHVCIDTGEKSFQCDICMTCFAHSYQLRKHKLSHTGEKPNEYSAINVGESKAEAPAIFKLETKSIEEIYLKSEIKDTPIYDNESFIQTEFIADTQNTTFNDCGSEINNDDIYIDLHHTSGNSACARSTDVQNIIENCEDKEISVTLSQSVGTRRHSEDKLYPCKMCSKCFVNSDCLKKHVCTVTGEILIQCEICNRFFSGYENLIKHKRVHTDAKPYQCDICDKCFAQKAHLIVHKRTHTGEKPHQCNICNKCFALADTLKKHIRVHTGEKPYQCDICKKCFAFADSWKKHKRVHTGEKPHQCDICMKCFAEISHLKSHKRTHSGEKPYRCDVCGKCFTQPGNLVIHKRRHTGDRRYQCHICNKSFIESYSLKLHMRLHTGEKPHQCDVCDKCFTHAVSLSRHKLSHAGEEPNEYSDIDVGETKVEAPVNFEPETKSIDETNLKVEIKDTAIFDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-