Xxan011017.1
Basic Information
- Insect
- Xanthostigma xanthostigma
- Gene Symbol
- -
- Assembly
- GCA_963575645.1
- Location
- OY754469.1:9772277-9778052[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 37 0.021 0.44 11.6 4.8 1 23 39 61 39 61 0.98 2 37 0.00019 0.0038 18.1 3.0 1 23 67 90 67 90 0.95 3 37 0.6 12 7.1 0.2 1 23 97 119 97 119 0.97 4 37 0.00014 0.003 18.5 1.5 1 23 125 148 125 148 0.94 5 37 0.0008 0.016 16.1 1.0 1 23 153 176 153 176 0.97 6 37 4.5e-05 0.00093 20.0 0.7 1 23 185 207 185 207 0.96 7 37 0.00059 0.012 16.5 0.1 1 23 210 232 210 232 0.98 8 37 0.12 2.4 9.3 0.6 2 23 239 260 238 260 0.78 9 37 3.3e-05 0.00068 20.5 0.5 1 23 266 288 266 288 0.98 10 37 0.00053 0.011 16.7 0.9 2 23 364 386 363 386 0.96 11 37 0.00034 0.007 17.3 0.4 1 23 392 415 392 415 0.97 12 37 0.0025 0.05 14.6 0.2 2 23 422 443 421 443 0.96 13 37 0.00064 0.013 16.4 0.5 1 23 447 470 447 470 0.96 14 37 0.011 0.22 12.6 0.8 1 23 475 498 475 498 0.95 15 37 2.7e-05 0.00055 20.8 0.9 1 23 507 529 507 529 0.98 16 37 0.002 0.042 14.8 0.1 1 23 532 554 532 554 0.97 17 37 0.00062 0.013 16.5 1.3 2 23 561 582 560 582 0.96 18 37 1.4e-05 0.00028 21.7 0.7 1 23 588 610 588 610 0.97 19 37 3.4 71 4.7 0.5 1 13 616 628 616 629 0.91 20 37 0.052 1.1 10.4 1.1 3 23 707 728 706 728 0.95 21 37 0.0094 0.19 12.8 1.2 2 23 735 757 734 757 0.97 22 37 0.0058 0.12 13.4 0.7 2 23 764 785 763 785 0.97 23 37 0.0022 0.045 14.7 2.7 1 23 789 812 789 812 0.96 24 37 0.011 0.22 12.6 0.6 1 23 817 839 817 839 0.97 25 37 6.1e-06 0.00013 22.8 2.5 2 23 849 870 848 870 0.97 26 37 0.0034 0.07 14.1 1.6 1 23 874 896 874 896 0.97 27 37 0.038 0.79 10.8 0.2 2 23 903 924 902 924 0.86 28 37 1.9e-06 3.9e-05 24.4 0.2 1 23 930 952 930 952 0.98 29 37 0.033 0.68 11.0 2.5 1 23 958 981 958 981 0.98 30 37 0.00037 0.0076 17.2 0.3 2 23 1067 1089 1066 1089 0.96 31 37 0.24 5 8.3 4.4 2 23 1150 1172 1149 1172 0.93 32 37 0.048 0.99 10.5 0.3 1 23 1177 1199 1177 1199 0.96 33 37 3e-05 0.00061 20.6 4.0 1 20 1208 1227 1208 1230 0.95 34 37 1.9e-05 0.00039 21.2 0.3 2 23 1235 1256 1234 1256 0.96 35 37 0.029 0.6 11.2 0.2 1 23 1262 1284 1262 1284 0.86 36 37 1.3e-05 0.00026 21.8 0.6 1 23 1290 1312 1290 1312 0.98 37 37 0.12 2.4 9.3 4.7 1 23 1318 1341 1318 1341 0.97
Sequence Information
- Coding Sequence
- ATGATTGAAACAATAAAAGAAGAAGCCATCGAAGATTATCAGACCGACCAGAAGCCTGAAATAATCATAGCTAATATGCTTTATACAGAGGGATTTATGCAGGTTAATGACGGCTTTCAATGCAAAACTTGCGGTCAGGTTTGTAAGTCAAAGAAAGTGTGGAAAAGACACTACTTGAGACACGTCACCGATCGACCTTTCAGCTGTGAAATTTGCGGCAAGTGCTATAAATCAACAGACCAGCTTAAGTCGCACAACCGACAAGTGCACCAGGAGAACAGAAAGGTGTTCGCTTGCGACATTTGCGACTTGAAAGCATCCAGTATGGCCGTATTAAAGAATCACCGATACACGCACTTGAACATTTATCCTTTCAGCTGTACAAAGTGCGACAAGAAGTTCCGTTCGAAAGCGGGCTTGATAAATCACACCCAGGGAAAACACGAGGGCGTCTCTTACTACTGCGACGTTTGCGTCAAATCGTTCACGACAATATCCGGCCTGAACGATCACAAGAAGAAACAGCACGATCCGAACTACGTGCGACCCGAATTCAAATGCGACGTCTGTCCGAAGAGCTATCCGACCAAAACCCTTCTGCGAAGACACAGGGAGGGTCACGAGGGTTTCACATGCGAAACGTGCGGCCTGGTGCTCGCTTCCAGGGCCGGACTCAAGCGTCACCTGCTCACCCACACCGGCGCCAAGCCGTTGACGTGCAAATATTGCGGCAAACATTTCGCGAGCAGCACGATTCTCGGACCGCATCTCAGAATACATACCGGCGCGAAACCGTACGAGTGCACGGTCTGCGGCAAACGGTTCAATCAGAGAAGTCCGATGGTGCTTCACATGAGGAACCATACCGGCGAGAGACCGATTGTAAGAATAAAAGAAGAAGAACCAGATCTAAAACTTGAAGAAGAGGATTATTCGGCGTTAAATCAACAAATTTCGTGGCTTAATCAAGGAGGGGATGATGCTTTTGTTGAAAAAGAGGACGGCTTGCATTGTAAAAAGTGTCCGGCAATTGTAAAGAAACACTATTGGTCGCGACATTGGACGAAACATACGACGTACAGGCCAATAGTGTGCGACATTTGCAATAAAACGTACAAAGATATGGAACAGATGAAGAAGCACAGAAAACGAGTGCACTTGGAGAGAAAGGAATTCGTGTGCGATATATGCGGAACACGACTGACTACCGAGGTCAGTTTGCAAAAGCACCGAAGGTACGTTCACTCTGAAAAGAAAACGCTCGAATGCGATCTGTGCGGCAACAAGTTTTCGAACGAAATCACATTGAAAGCGCATTACAACATACACATAAATCCGTTCAACTGTCCGCAGTGCGATAAGAAATTGGCAACGAAAACGGCCCTGGAATCGCACATAAAGAACAAGCACGAGGGCAGTAAATACCAGTGCGACGTctgcaataaaattttcaactgGCAGAGCAGCCTGTACGTTCACAAAAAAGAACAGCACGATCCCAACTACGTGCGCCCCGATTTTAGATGCGACATCTGCCCCAAAAGCTATCCGACAAGAACGCTGTTGAGACGCCATCGAGAAAGTCATTCGGGCTTCGCGTGCGAAACTTGCGGCATGGTGGTGGCGTCGAGAAACGGCTTAAAGAAACATTTGTTGACGCACACGGGCGCCAAGCCGTTGACGTGCAAATATTGCGGAAAACATTTTACGACCAGTTCGGTTTTGGGACCGCACATGCGAATTCACACGGGAGAGAAGCCGCACGAGTGCACCGTCTGCGGCAAACGGTTCAATCAAAGGAGTCCGCTCGTCATACACATGCGAGGACACACGGGCGAGCGCCCGTACAAGTGCACGCATTGCGTCGAGGCGTTTGTTAGCAAGGATATAAAAGTGAAAGAAGAGGATGATGACGATGATGAGTCGTTAGACGATCAAGAATGTGTTGAAAGATCCGTTACGAGAAATATGAGACTAAAGAGAAATGATGCTCAAGAGATTAAGGGATACGTTGAGAAAGCGGACGGACTGCATTGTAAAATGTGTTCGGCGGTCTGCAAATCtttgtatttttggaaaagacACTCGTTAATGCACGTGACGAAGAAAACAGTCGCCTGCGACATTTGTAGCAAGGCCTATAAAGATGTCGCTCAAATGAAGAAACATAAGAAACACGTCCATCTCGACAAGAAAATTGTGAAGTGCGAATTGTGCGACGCGAAACTGTCGAGCGAGGCGTATTTGAAACATCACATGAAAAAAATGCACGTCGAAAAGAAAAAAGTGAAATGCGATCTTTGCGGAAACAAGTTTTCGAGTGAAATGACATTTAAGGCGCACTATAAAATCCACGTGAATCCTTTTAATTGTACGAAATGTGATAAAAAACTGACGACAAAACACGCTTTGGAATTGCATGTCAGAAACATGCACGAGGGCACGAAATATTATTGCGACGTGTGTAATAAAGTCTTTAATTGGGAAAGCAGTTTGTCGCTGCACAGAAAGTTGCACGATCCGAATTTCATAAGGCCGGCTCTGAAGTGTGAAGTTTGCGGCAAAACTTATCACACGAATTCGAATTTGAATCGGCATCTGCAGAGCCACGGCGGCGGTCATCCGTGCGAAACGTGCGGTTTGGTGTTGTGCTCCAGGGAGGGCTTGAAAAAACATCTTCTGACTCATTCCGGCGCCAAACCGTTGACTTGTAAATATTGCGGCAAGAATTTCGCCAGCAGTTCGATTCTCGGACCACATTTGAGAATTCACACGGGGGAGAAGCCCTACGTGTGCACGGTTTGCGGGAAACGGTTCAATCAGCAGAGTCCTCTCATCATTCATATGAGAGGTCATACGGGGGAGAGGCCCTACAAGTGCTCCCATTGTTTGGACGCGTTTATTAGCAGATCGCTGTTGAATAGTCATTTGCAGAAATTCCATTTACTTGTTAAGAATGTGTTAAAACTTAATgaagaaataaaagaaaagcGTGTCTTGCTCGACAAGGAAGTCGGTACACTTCCGGTcgtaaacaatttattaaagcGAACGACGTCTTGGCGTGATTGGCCGGACGAAACCGATGGCTATATTAAGTTATCTGACGGAATTCACTGTAAATTATGTTTGACAGTGCACAGAAGTGTGCGCTATTGGAAAAAACACTATTTAGCGCACATAACTGAGAAAAAGATTGTCTGCGATATTTGCAACAAATCGTTCAAAAGCGTCGGTCAAATGAACGTTCACAAACGACGCGTTCATCTAGACAGGAACGATGCCAAATTTCGCAATGCGAGTATTTCTAGTGTACGTCGCAATAACAGACGCGGCGAGAAGGAGAAAAAAGATAGAAGTCGTAATTTCGAATGCGATATTTGCGGAAATAAATACTTGAGTGACAAGATTTTGAAAGCGCATCGGAATATTCATGTTAATCCGATGACGTGTCATCAGTGCGATAAAAAGTTTGCAACAAAACAGGCGAGGGAATATCACGTCAAACATTTGCACGAAGGGagaaaatattattgtcaaatATGCAACAAAGAATTCAAATGGGAAACTGGATTGTCGCTGCACATTAAAGCTCACGATCCAAATTTCAAAAGTCCCGCTTTTAAGTGCGACGACTGCGGAAAAACTTTCGGCCGAAAATCGAACTACAACAGGCACTTGGAATGCCATCAAGAAGGCTTGCCGTGCGACGTTTGCGGTGTGTTGTTTAAAACGAAACAGAATCTGAAACGACACATGATCACCCACAGCGGGGTGAAAGCATTCGCGTGCAAATATTGCGGTAAGAATTTCGCAAGCAGTTCGATTTTGGGACCGCATCTTCGCATTCATACAGGGGAGAAACCGTACGAGTGTAGCGTTTGCGGTAAACGGTTCAATCAGCGCAGCCCGTTTGTGATTCACATGAGAAACCATACCGGAGAGAGACCCTACAAGTGCTCGCACTGTTCTGACGCGTTCACTCATAAAAATCTTTTGAGTATACATTTGCAAAACTTTCATCAACTTGTTAAAACCTGA
- Protein Sequence
- MIETIKEEAIEDYQTDQKPEIIIANMLYTEGFMQVNDGFQCKTCGQVCKSKKVWKRHYLRHVTDRPFSCEICGKCYKSTDQLKSHNRQVHQENRKVFACDICDLKASSMAVLKNHRYTHLNIYPFSCTKCDKKFRSKAGLINHTQGKHEGVSYYCDVCVKSFTTISGLNDHKKKQHDPNYVRPEFKCDVCPKSYPTKTLLRRHREGHEGFTCETCGLVLASRAGLKRHLLTHTGAKPLTCKYCGKHFASSTILGPHLRIHTGAKPYECTVCGKRFNQRSPMVLHMRNHTGERPIVRIKEEEPDLKLEEEDYSALNQQISWLNQGGDDAFVEKEDGLHCKKCPAIVKKHYWSRHWTKHTTYRPIVCDICNKTYKDMEQMKKHRKRVHLERKEFVCDICGTRLTTEVSLQKHRRYVHSEKKTLECDLCGNKFSNEITLKAHYNIHINPFNCPQCDKKLATKTALESHIKNKHEGSKYQCDVCNKIFNWQSSLYVHKKEQHDPNYVRPDFRCDICPKSYPTRTLLRRHRESHSGFACETCGMVVASRNGLKKHLLTHTGAKPLTCKYCGKHFTTSSVLGPHMRIHTGEKPHECTVCGKRFNQRSPLVIHMRGHTGERPYKCTHCVEAFVSKDIKVKEEDDDDDESLDDQECVERSVTRNMRLKRNDAQEIKGYVEKADGLHCKMCSAVCKSLYFWKRHSLMHVTKKTVACDICSKAYKDVAQMKKHKKHVHLDKKIVKCELCDAKLSSEAYLKHHMKKMHVEKKKVKCDLCGNKFSSEMTFKAHYKIHVNPFNCTKCDKKLTTKHALELHVRNMHEGTKYYCDVCNKVFNWESSLSLHRKLHDPNFIRPALKCEVCGKTYHTNSNLNRHLQSHGGGHPCETCGLVLCSREGLKKHLLTHSGAKPLTCKYCGKNFASSSILGPHLRIHTGEKPYVCTVCGKRFNQQSPLIIHMRGHTGERPYKCSHCLDAFISRSLLNSHLQKFHLLVKNVLKLNEEIKEKRVLLDKEVGTLPVVNNLLKRTTSWRDWPDETDGYIKLSDGIHCKLCLTVHRSVRYWKKHYLAHITEKKIVCDICNKSFKSVGQMNVHKRRVHLDRNDAKFRNASISSVRRNNRRGEKEKKDRSRNFECDICGNKYLSDKILKAHRNIHVNPMTCHQCDKKFATKQAREYHVKHLHEGRKYYCQICNKEFKWETGLSLHIKAHDPNFKSPAFKCDDCGKTFGRKSNYNRHLECHQEGLPCDVCGVLFKTKQNLKRHMITHSGVKAFACKYCGKNFASSSILGPHLRIHTGEKPYECSVCGKRFNQRSPFVIHMRNHTGERPYKCSHCSDAFTHKNLLSIHLQNFHQLVKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -