Xxan014939.1
Basic Information
- Insect
- Xanthostigma xanthostigma
- Gene Symbol
- -
- Assembly
- GCA_963575645.1
- Location
- OY754471.1:41754521-41772172[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 0.00015 0.0031 18.4 2.5 3 23 123 143 121 143 0.97 2 31 0.00049 0.01 16.8 1.0 2 23 162 183 161 183 0.95 3 31 0.0019 0.039 14.9 0.1 2 23 189 210 188 210 0.97 4 31 0.11 2.2 9.4 0.2 2 19 213 230 212 231 0.94 5 31 4.4e-05 0.0009 20.1 1.1 1 23 240 262 240 262 0.98 6 31 1.8e-05 0.00037 21.3 0.7 3 23 270 290 268 290 0.96 7 31 0.00065 0.013 16.4 0.7 1 19 296 314 296 318 0.87 8 31 0.0008 0.016 16.1 3.5 1 23 324 346 324 346 0.98 9 31 0.0045 0.091 13.8 2.7 1 23 352 374 352 374 0.94 10 31 9.5e-06 0.0002 22.2 2.7 1 23 380 402 380 402 0.98 11 31 1.2e-06 2.4e-05 25.1 5.2 2 23 562 583 561 583 0.98 12 31 0.002 0.04 14.9 1.4 1 23 589 611 589 611 0.97 13 31 0.0036 0.075 14.0 0.1 3 23 618 639 617 639 0.92 14 31 3.6e-05 0.00074 20.3 2.5 1 23 649 671 649 671 0.98 15 31 0.00014 0.0028 18.5 0.4 2 23 677 698 676 698 0.97 16 31 0.00043 0.0089 17.0 3.1 3 23 706 726 704 726 0.96 17 31 7e-06 0.00014 22.6 0.1 1 20 732 751 732 754 0.93 18 31 4.3e-06 8.8e-05 23.3 0.6 1 23 760 782 760 782 0.97 19 31 0.00042 0.0086 17.0 0.5 1 23 788 810 788 810 0.94 20 31 1.5e-06 3.2e-05 24.7 1.2 1 23 816 838 816 838 0.99 21 31 0.00028 0.0057 17.5 1.5 1 23 844 866 844 866 0.98 22 31 7.6e-05 0.0016 19.3 1.9 1 23 949 971 949 971 0.97 23 31 0.0012 0.025 15.5 5.1 1 23 977 999 977 999 0.99 24 31 0.0042 0.086 13.9 0.7 2 23 1002 1024 1001 1024 0.96 25 31 8.1e-05 0.0017 19.2 2.0 1 23 1030 1052 1030 1052 0.98 26 31 2.1e-05 0.00044 21.1 0.3 3 23 1060 1080 1058 1080 0.96 27 31 4.2e-05 0.00085 20.2 0.6 1 23 1086 1108 1086 1108 0.96 28 31 1.8e-05 0.00037 21.3 0.7 1 23 1114 1136 1114 1136 0.97 29 31 0.0019 0.038 15.0 0.4 1 23 1142 1164 1142 1164 0.96 30 31 8.2e-06 0.00017 22.4 2.1 1 23 1170 1192 1170 1192 0.98 31 31 0.0025 0.051 14.6 7.2 1 23 1198 1220 1198 1220 0.98
Sequence Information
- Coding Sequence
- ATGTTAACGGAATGCACCACTGTACATGTCGACAGTGATGACGTTCTCCCAAAAATGATCTGCGAAACGTGTAAAGAACGAGTAAAAAACTGCTATGAATTTAGAAAACAGTGTTTTGAGTCGGAACAAAAATTTCTTTCGTCATGCCGGAACGTCGACAGCGAAACCgataatataaaaacagaatTGAAGGTCGAACTAAAGGACGACGTTTCAGAACAACAAGACGAATCAGATTTTCGCGATGAAGATGTCAAACCAGATATTTTAACCGAAGACAACGTTGAAACCTGTTCAAACGatcatatatattatgaaaatttaaatgatgaaataaaaaacactttaaaaaataaaatttcgaattGTACAATATGTGGGAAACAATACAAACGTAAATTTAAGCTTCTTAGTCATATGAAATCGCACGGTATTAAGTCGTTAAACGAAAACGATATTTTGAATTCTGTCGATGGTTCGTGGAGTTGTACGATGTGCGAaaagaaatttagaaaaaagatCGATCTCGCCAAACACATGAGTGACCACGTGGAAAGCAAATGGAGATGCGATATATGTAATAAGTTTTATATAGTTGAATGGGCgttaaaaaatcatttgatGACACACAAAATCGTTTGTAAGGTTTGTTTTAAGGAATTTGAACGACGCGACGAATTGGATAACCATTTTCCTGAACACAAAGATCATCTACCGTTTGTTTGTAAGGAATGCGGAAAGCAGTTTGAAAAGAAAAGACAGCTTGTTTTACATGTTAAGACCCATACCGGTGAGCGAAACCATTTGTGTACGATATGCGGTAAATCATTTGCGTTGGCCGGGAACTTAAGTACACATTTACGAACGCATTCCGGAGAAAAACCCTACATTTGCAAAACTTGTGGTAAAGCGTTTTCTCAATGGAGTTCGTTACGGTTTCACAACGCTCAACACAATTCGGaacgttcatttgtttgtcaAACATGCGGCAACGCGTACAAACATAGAACAGTGCTGAAAAGACATATGAGAAAGCACACTGGAGAACGAAACTATGCCTGCATATACTGTGATAAGAAATTTTATGAATCGAAACATCTGAATAACCATCTTCTAACACATACAGGAGAGAAGAAtcataaatgtgaattttgtggCAAAGCATTCAGCCGAAATACGAATCTGTCCGTACATAGAAAAATCCATACAGGCGTCAGACCTCACATATCCTGTCATAGTAAATTGCCAAAACATATATGTAATAAATGTAAAACACAAGCAATAAACTTTTATAACTTCAAAGAACTGTGCCATAAATCGGAACAAAAACTGTTGCAGTTTACTAGTCAGTCATATTACAATGATCAGCAAATCAATATCGGAGAGTTTTTACAACCAaaagttgaaattaaaaacgaaactgATGATGTCGATGCCGACAATGCAAATGACAGTGCTGATTGTAGTTTGCCAGACGACAAATCAGATTGTGATTTTAATGACGACGATGATGTTCCGATgttgaaaaaaactaataacGATGATATCAAATACCCTGAAGAAAACTTAACAACTGACCTTGACTCGAAACAGAACATACTAATGTTGAAATTAAACGATTCGAATGACTTATCTATGAAATTGGTTATCCGCAATAAAAACCAACATAAGCAAAGAAACAAACAATGTCACGAGTGCAATAAAACGTTCAAAACTTCATCTGATTTGAATCGACATATTAAAAGACACTGCAAAGAAACAAGTTTTCATTGTTTCATTTGTAAAAGGAGTTTTCCAGACCAATCGGAGTTGGATATACATTCAGAAACACACGAAGGAGAAACAAATGCATGTGAAGACTGTGGTAAGCAGTTTACTGAAAGAGTCGACTTAGTGCAGCATTTAGAGtttgaacatTCGGAACATAAACAGAAAACAAATACGCATCAGTGTGAAGTGTGCGGAAAAGTATTTAATCATAAGTCTGTGTTGAAAATCCATTTAGAAAGGCATAAAGAAGAAATTGTTACGTGCAACGAATGCGGAAAGCAGTTTCAAAATAGTATAAAACTCAAAGCTCACTTGCAAGTGCACATCCCGGAGAAACCGCATTTGTGTACAGTGTGCGGAAGAGCATTCGCTTGTTCGTCGAATCTGAAAACCCACATGAGAATTCATaacggtgagaaaccgtacgtTTGCAACGTTTGCGGAAAAGCTTTTGCTCAATGGTCATCGCTCCGTAGCCATCAGCCTGTGCATTCGGATGAAAAACATTTTGCGTGTCCAACGTGTGGAAAAGCTTTCAGTCGGAAAAATGTACTCAGACTTCACATGAGATATCATACAGGCATAAGAAATTATCCATGTACAATGTGTGATAAGAGATTTTACGATGCTCAAATGTTGAAAAAACATTCGGTTGTCCATACAGgcgaaaaaaattacaagtgCGAATTCTGTGGAAAAGCATTCAATCGGAAAAGTAACTTAGACGTTCACAGAAAGATTCATACGGGCGACCGGCCGCACGTGTGCTCCGTTTGTGGCAGGGGATTCATTCAACTCCATGTACTCAACAGTCATATGAATACACACAATGACAACAACGATCCATTTAAATCGAATATATGCGAAATGCTTTTGGAGTGCGTTTCCATACATGAGCCTGTAAGTTATTTAGGAGATACCGGTTTTGTCACAGACGATACAGATTCTGAAAGTCGGCCACTTTCGGAAATTGTCGTTAAAACAGAAGCGAGTAATAAAATCAGACGAAAATTTAAAAGGAACAAATCAAATGTTTCGTTTAAAAGGAAGCCTCCAAAAAAATCGGATGAAACGTTCGACTGCACGATGTGCCACAAATCGTTCAATAAAAATTCGGAACTGGCAGTACACATAACGTCGCATTTCGGCGGCGAAGTTTACAAGTGCGAAAAATGTCGCAAAATATGCGTTACGCAGTCGAGTTACGAGAAACATTTGAAAAGACATGCGATCAAATGCGAGCTTTGTTTATCTACGTTCAAAGACAAATCCGAATTGGAAGCGCACAAGAAAAAAGAACACGACGGACAACTGGCATACAACTGTAACAAATGCGgtaaacgtttcgaaaaaaaacacgGCCTAGCGATACATCTAAAAATACACGCTGGCGAGAAAAAACATTTGTGCAACGTTTGCGGGAAAGCGTTTACGTTGCCCGGCAACTTGGTGACGCATCAACGGATTCATACCGGTGAAAAACCGTACGTTTGCAGTTTCTGCAGCAAGGGCTTCACCCAGTGGAGCACCCTGCAAACGCACATTGTCAATCATACCCGTGAGCGCGCGTTCGTATGCCAGACGTGCGGAAAAACGTTCGCTAGGAAAGGAACGCTTCGAATACACAATAAGATTCATACGGGTGAGAAGAAGTACGCATGCGGTTACTGCGACAGAAAGTTCTATGCGTCTAATTCGCTCACAAAACATCTTGTCGTGCATACAGgtgaaaaaaatttcaaatgcgaAACTTGCGGAAAATCGTTCAATAGAAAAAGTACATTGGTGAcgcataataaaatacataCCGGAGAGCGACCCCATGTTTGTTCTGTATGCGGATGTGCTTTCATACAAAAACACTGTCTCATTTCACACATGAAAACCCATCAGTAA
- Protein Sequence
- MLTECTTVHVDSDDVLPKMICETCKERVKNCYEFRKQCFESEQKFLSSCRNVDSETDNIKTELKVELKDDVSEQQDESDFRDEDVKPDILTEDNVETCSNDHIYYENLNDEIKNTLKNKISNCTICGKQYKRKFKLLSHMKSHGIKSLNENDILNSVDGSWSCTMCEKKFRKKIDLAKHMSDHVESKWRCDICNKFYIVEWALKNHLMTHKIVCKVCFKEFERRDELDNHFPEHKDHLPFVCKECGKQFEKKRQLVLHVKTHTGERNHLCTICGKSFALAGNLSTHLRTHSGEKPYICKTCGKAFSQWSSLRFHNAQHNSERSFVCQTCGNAYKHRTVLKRHMRKHTGERNYACIYCDKKFYESKHLNNHLLTHTGEKNHKCEFCGKAFSRNTNLSVHRKIHTGVRPHISCHSKLPKHICNKCKTQAINFYNFKELCHKSEQKLLQFTSQSYYNDQQINIGEFLQPKVEIKNETDDVDADNANDSADCSLPDDKSDCDFNDDDDVPMLKKTNNDDIKYPEENLTTDLDSKQNILMLKLNDSNDLSMKLVIRNKNQHKQRNKQCHECNKTFKTSSDLNRHIKRHCKETSFHCFICKRSFPDQSELDIHSETHEGETNACEDCGKQFTERVDLVQHLEFEHSEHKQKTNTHQCEVCGKVFNHKSVLKIHLERHKEEIVTCNECGKQFQNSIKLKAHLQVHIPEKPHLCTVCGRAFACSSNLKTHMRIHNGEKPYVCNVCGKAFAQWSSLRSHQPVHSDEKHFACPTCGKAFSRKNVLRLHMRYHTGIRNYPCTMCDKRFYDAQMLKKHSVVHTGEKNYKCEFCGKAFNRKSNLDVHRKIHTGDRPHVCSVCGRGFIQLHVLNSHMNTHNDNNDPFKSNICEMLLECVSIHEPVSYLGDTGFVTDDTDSESRPLSEIVVKTEASNKIRRKFKRNKSNVSFKRKPPKKSDETFDCTMCHKSFNKNSELAVHITSHFGGEVYKCEKCRKICVTQSSYEKHLKRHAIKCELCLSTFKDKSELEAHKKKEHDGQLAYNCNKCGKRFEKKHGLAIHLKIHAGEKKHLCNVCGKAFTLPGNLVTHQRIHTGEKPYVCSFCSKGFTQWSTLQTHIVNHTRERAFVCQTCGKTFARKGTLRIHNKIHTGEKKYACGYCDRKFYASNSLTKHLVVHTGEKNFKCETCGKSFNRKSTLVTHNKIHTGERPHVCSVCGCAFIQKHCLISHMKTHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -