Xxan014935.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xanthostigma xanthostigma
Gene Symbol
-
Assembly
GCA_963575645.1
Location
OY754471.1:41723168-41737865[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 0.58 12 7.1 5.5 2 19 141 158 141 161 0.94
2 39 0.00012 0.0025 18.7 2.0 1 23 164 186 164 186 0.98
3 39 0.039 0.79 10.8 0.5 2 23 231 252 230 252 0.97
4 39 7.1e-05 0.0014 19.4 1.5 1 23 258 281 258 281 0.97
5 39 7.4e-06 0.00015 22.5 3.6 1 23 337 359 337 359 0.99
6 39 0.014 0.28 12.2 2.8 1 23 365 387 365 387 0.96
7 39 9.4e-06 0.00019 22.2 2.1 1 23 393 415 393 415 0.97
8 39 4.4e-06 9.1e-05 23.2 1.9 3 23 423 443 421 443 0.96
9 39 0.0003 0.0062 17.5 0.1 1 23 449 471 449 471 0.91
10 39 4.9e-05 0.001 19.9 0.6 1 23 477 499 477 499 0.99
11 39 0.001 0.02 15.8 0.6 1 23 505 527 505 527 0.96
12 39 9.6e-06 0.0002 22.2 1.6 1 23 584 606 584 606 0.98
13 39 0.00062 0.013 16.5 0.3 1 23 612 635 612 635 0.98
14 39 5.4 1.1e+02 4.1 4.0 3 20 712 729 710 731 0.89
15 39 0.034 0.7 11.0 1.3 1 23 736 759 736 759 0.97
16 39 6.2e-05 0.0013 19.6 2.3 2 23 776 797 775 797 0.97
17 39 0.00063 0.013 16.4 2.3 1 23 803 826 803 826 0.95
18 39 0.012 0.24 12.4 2.4 2 23 860 881 859 881 0.97
19 39 5.4e-06 0.00011 22.9 3.0 1 23 887 909 887 909 0.99
20 39 0.00026 0.0054 17.6 1.4 1 23 915 937 915 937 0.97
21 39 0.0027 0.055 14.5 0.1 2 23 944 965 943 965 0.96
22 39 9e-06 0.00018 22.2 1.9 3 23 973 993 971 993 0.96
23 39 0.0003 0.0062 17.5 0.1 1 23 999 1021 999 1021 0.91
24 39 4.9e-05 0.001 19.9 0.6 1 23 1027 1049 1027 1049 0.99
25 39 0.0054 0.11 13.5 1.0 1 23 1055 1077 1055 1077 0.94
26 39 2.6e-06 5.4e-05 23.9 1.2 1 23 1123 1145 1123 1145 0.98
27 39 0.00067 0.014 16.3 0.3 1 23 1151 1174 1151 1174 0.97
28 39 8 1.6e+02 3.5 7.7 1 21 1314 1334 1314 1336 0.92
29 39 0.00078 0.016 16.1 1.7 2 23 1346 1367 1345 1367 0.97
30 39 0.00019 0.0039 18.1 3.9 1 23 1373 1396 1373 1396 0.96
31 39 2.4e-05 0.00049 20.9 3.9 1 23 1465 1487 1465 1487 0.99
32 39 0.00058 0.012 16.6 1.5 1 23 1493 1515 1493 1515 0.96
33 39 0.00012 0.0025 18.7 0.2 2 23 1522 1543 1521 1543 0.96
34 39 4.9e-06 0.0001 23.1 1.0 3 23 1551 1571 1549 1571 0.96
35 39 2.4e-06 4.9e-05 24.1 0.2 1 23 1577 1599 1577 1599 0.98
36 39 0.0014 0.028 15.4 2.1 1 21 1605 1625 1605 1627 0.95
37 39 0.0002 0.0042 18.0 0.3 2 23 1634 1655 1633 1655 0.95
38 39 2.1e-06 4.4e-05 24.2 2.1 1 23 1661 1683 1661 1683 0.99
39 39 2.5e-05 0.00051 20.9 2.6 1 23 1689 1711 1689 1711 0.98

Sequence Information

Coding Sequence
ATGCAGCTTACAGAAATATTATGGGAATGTGCCTCAATTCAGATTACATCGGATGACGACTTACCTAAACTGATTTGTGAAAAGTGTGCAGACCAATTGAAAATCGGCTATGAATTCAAGCTTATGTGTCATAATACCGAAAGAGAGTTATTAAAACTGATAGGAAAAGAAttcgaaaataatataaaaaatgaaaatgatattaaagaaGACAGTACAACGTTAGAAATAGGAATTGATATAAAAAACGAGCAAATTGGGGCCTTATTCGGTAACGACGAATTTACAAACGACTCGGATAATCAAAGTGATTGGCTAATTAATGACATTAAAACAGAACAGAAACAAATAGTTcctagaaaaaaattacaaaaaaataatgccaAAAGAAAGAAATTAAAACGGTTCAAAAAAGGTGCCAAATGTGATaaatgttcaaaagtttttcataaaaagtcTGATTTTCAAACACATtcgtgtgaaaaaatatattcatgcCAAGTCTGTTCAGAATCGTTTACTGCCAAGTCTTATCTaactaaacatttaaaaaagcaTTCCGAAAATAATGACAACCTCGACGACAatagttcaaatattagtcaaGAAAAAGAGGAACAAACTGAAGATATTCATCCCGACTTAGAATATGTTAGAAATATACCGctcgagcaatttaaaaaaggtATCAAATGCAGTAAATGTCCCCGAACATTATTCAGAAGATCTGATATGGAAATACATGTCATTCGTCACATAGGAATAAAGAAGTTTCCGTGTCAGTTATGTTCGAAGTCGTTTACGGTTTTTTCCGATTTGACGAGACACCGAAAAACGGTACATGCTACGATTTTATACGGGTTCAAAGACAACGACGGAGAAGATAAAGACAATTCACAAGAAAACAAATCGGCGATTAATCCGTTtaattgtaaaatgtgttcGAGGACGTTTTGGAGAAAATCTGATCACGATTTGCACGTGAAACGACATCTCGGTATCAAGAAATTCAAGTGTGATTTTTGTTCGAAAATGTTCGTCACGCGATACGATCTGAAGAAACATCTGAGAACGCACGGCGACCTGTCGGGCTTCCATTGCAAATATTGTTATAGAAGCTTTGATAAGAGCGAGCAGTTAGACGAACATATGGATGAACATGCGAATGACGTGTGTCATGTTTGCCAACAGTGCGGAAAACAATTCAGGAGAAGTGGAAATTTAAAGCTACACATGACGGTCCATACTGGCGAAACACCTCATCTGTGTACGGTTTGCGGTCGAACGTTCAGACTTTCGAGCAATCTGAAAGTCCACATGCGAATTCATaacggtgagaaaccgtacgcTTGCAAAACTTGCGGCAAGGCCTTCGCGCAGTCGGCGGCGCTGCGCGTCCATCTGCCGACGCATTCCGACGAAAAGCGATACGTCTGCCAGACGTGCGGCAAGGCGTACAACAGACAGAATGCTCTGTACGCGCACACAAGACGGCATCTGGGAGTCAGAAATTTTCCCTGTACGATGTGCGATAAGAGGTTTTATAACGGCACGTTGCTCAGAAAACATCTCGTCATTCATACAGAACAAGAGTTGCTGAAACTGATAGAAACCGATTCGAATTGTAATTTGAACAGTAAAAATTGCACTCAATCGGAATCTTCATTTACCGAGccagaaattattattaaaaccgaTCTCGAACAAAATGTATACAATGAAGATTTGCTATCGGCGAGTGGAAAAAGTTTTACATGCAACATTTGTGAGAAAACATTTCCGAAGAAAAGCAAATTAAGAATACATATGGATCGGCATTTAGGTGTCAAGAGATTTAGATGCAAAATATGTGATAAAGGCTCCGTTGAGAAGTACGATTTAGTGAAGCATATTAACAAAGTCCACGAAATAATTCGAGACGATGTATCGGAATATATCGTGGTTATGAAACAAAATGCGAACGCTAAAACAGAACCTGTCGTCAAAGGAAATGTGGAAACGGAGGAGGTCGTTAAAGAAGAAACTGATCAGACTGATGATTTGTTCAATGATGGTATGTTCGACGACGAAAGCGTATTCGATAACGAAACAAGTTACGACACTCAAAGAGACACCGAAGAATTGAATATTGATTGCGAGACGTGTCATAAAACATTCTCAGAACGAAAAAAATACGATTCACATaagtgcaataaaaataaaaagttcaaaTGCGATTTTTGTAACGATAGGTTTGCTAAAAAAGGTCTTTTAGAACAACACGTAAAAAAGAGTCATTCGAAGATTGAAAAGAAGTTGAAAAGTACTTCCGGCAGCGAtgataaaacttgtaaaatatgCAATAAGTCATTTTctggaaaatataaattgagCATTCACATGAATCGGCACGTCGGCGAAAAGAGGTTTAACTGTACTCAGTGCGATGAATGTTTCGTTGAAAAAAGCGAATTGACGAAGCATGTTGAAAAAACGCATTCGTTGTCTAACATGACGAACTCGGACTTTCAAGATAATTCGGACATATCGAGTGCGAACGAGGACGATTCGACGGATAAGAGTGTTAAATATACACTAAAGTGCAGTTTGTGCCTTcgaatgtttagaaaaaaatccaaTTACGATTTGCACATTAAACGACACTTGggcataagaaaattcaaatgcgATATTTGTCCAAGGACATACGTTACGCATTACGACTTGAAGAGGCATCTACGGACGCACGGAGAACTAACGGGCTTCCATTGCAAGCAGTGTTACAAGAGCTTTGATAAAAGCGAAGAGCTGGAGGCTCATATGGCCGTACATGCCAACGATGCGCCGATTGTTTGTAAGGAATGCGGAAAACAGTTTTTGATGAAAGGAAACTTAAAACTTCACATGGCTGTCCATTCCGGAATAAGACCTCATCTGTGTACGGTTTGCGGTCGAACGTTCAGAGTTTCTAGGAATCTGAAAGTCCACATGCGAATTCACAACGGGGAAAAGCCGTACGCTTGCAAGACATGCGGCAAGGCGTTCGCGCAGTCGGCGGCGCTGCGCGTCCATCTGCCGACGCATTCGGACGAAAAGCGATACGTCTGCCAGACGTGCGGCAAGGCGTACAACAGACAGAATGCTCTGTACGCGCACACAAGACGGCATCTGGGAGTCAGAAATTTTCCCTGCACGATGTGCGATAAGAGGTTTTATAACGGCACGTTGCTCAGAAAACATTTCGTTATTCATACAGaagACAGTTTCATTTCGAACATCAAAAAACTTTGTAACGAACCTTCATTAGTAGAgcctgaaattattattaaaactgacCCCGAACAAAATGCAAACAACGAAGAACTTTCAACGGAAAGTGGAAAAAGTTTTGTTTGCAACATTTGTGACAAAAcgtttgttaaaaaaagcaaGCTGAGAATACATATGGATCGTCATTTAGGCGTTAAGAGGTTTACATGTAAAATCTGTGATAAAGGCTCCGTTGAAAAATATGATTTAGTTAAGCACATTAATAAAGTTCACGAAATAATACGAGGTAATATATCGGAGTATATTGTCGTTGCAAAACCGGACGTGAATATCGAATCAGAAATTATCGTAAGAGACGAAACGATGGTAAAAACGGaaactgatataaaaaatgaaacggAACAGAGCGATACCTTGATCGATAACGATGAATTTTATTTCGATGAAAACGAACTAGATACAACGGTAGATTCTGATAATTTATGTCAAACAGAAATTCAAGAACAAAACAATGCAGATAACGGATTTCTTTGTGCAACGTGTAATCAAACGTTCAAGGAACAAAAGAAaaaaatgtttGCCAAAAAATGTTTCTTAGAAAGACATATAAAACAAATGCATGCAAACAAACAGTTGAAGGATTCTACTGATAACTTATGTGAAAGTCAAACAATCCAAGAACAAACCGATTTTCATTGCACGACGTGTAATAAATCTTTTAAGGAACAAAAGAAGTACGATTTACACTTAAAATGTCATGAAGATGCGTTGAACGAAGATGACAAAACGTGCAAGATATGCAAGAAGATATTTTCGGGAAAATACAAATTAGACATTCATATGAACCGGCATATGGGTATAAAAAGGTTTAAATGCacaaaatgtgataaatgtttCGTGGAGAAAAACGATTTGATGAAACATATTTATAAAGTGCATTCGTTTTCCGATCTTTCGAACGAAGCAAATAAAAACGCATGCAGTCCTGAAAGTCCTGTATCAAATACAGAGGAAACAAATGAAGACAGTGCGGTTGATAATTCGTTTATAAAATATCCATTGAAATGCGATTTATGCCTTCAattgttttggaaaaaatctagTTACGATTTGCATCTTAAACGACATTTAGGTATTAGAAAATTTAAGTGCGACATTTGTCTGAGAACATTCGTCACGCATTACGACTTAAAGAGGCATCTACGGACGCACGGAGAACTGACCGGCTTTCATTGCAAGCAGTGTTACAAGAGCTTTGATAAGAGCGAGGACTTGGAAGCTCACATGGCAGAGCATGCTGATGATTCACCTCTCGTCTGCAAAGAATGCGGAAAGCAGTTCATGATGAAAGGCAATTTGAAATTGCACATGGCTGTTCATTCTGGAGTAAGGCCCCATTTATGCACAGTCTGCGGTCGCGCTTTTACTCTGTCTAGCAACTTAAAAGTCCACATGCGAATTCACAGTGGGGAGAAGCCCTACAACTGTAAAGTATGCAATAAAGCATTCACGCAATGGGCATCGTTGCGTAGCCACATGGCCGTCCACGCCGAAGAGAAACGGTTTGTCTGCCAGACTTGCGGCAAGGCGTTTAGAGGTCAGAACACGCTGAGAGTACATTTGCGATGTCACAACGGAATACGCAAAATTCCGTGTCCTTTATGCGACAAACGATTTTACGATAAGGCTTTGCTCAGAAAACATTTCGTTACACATACAGatgaaaaaaaattcaaatgcgaaACTTGTGGCAAGGCATTTAATCGGGCTGACCATTTACGCGTCCATAGCAGAACGCATCGCGGAGAACGGCTATACGCCTGTGAAGTTTGCAGCAAGAGTTTTACGCAAAATCAATGTCTTATCAATCACATGAAGACGCATACAGATCAAGTTGTGCATAGTTAA
Protein Sequence
MQLTEILWECASIQITSDDDLPKLICEKCADQLKIGYEFKLMCHNTERELLKLIGKEFENNIKNENDIKEDSTTLEIGIDIKNEQIGALFGNDEFTNDSDNQSDWLINDIKTEQKQIVPRKKLQKNNAKRKKLKRFKKGAKCDKCSKVFHKKSDFQTHSCEKIYSCQVCSESFTAKSYLTKHLKKHSENNDNLDDNSSNISQEKEEQTEDIHPDLEYVRNIPLEQFKKGIKCSKCPRTLFRRSDMEIHVIRHIGIKKFPCQLCSKSFTVFSDLTRHRKTVHATILYGFKDNDGEDKDNSQENKSAINPFNCKMCSRTFWRKSDHDLHVKRHLGIKKFKCDFCSKMFVTRYDLKKHLRTHGDLSGFHCKYCYRSFDKSEQLDEHMDEHANDVCHVCQQCGKQFRRSGNLKLHMTVHTGETPHLCTVCGRTFRLSSNLKVHMRIHNGEKPYACKTCGKAFAQSAALRVHLPTHSDEKRYVCQTCGKAYNRQNALYAHTRRHLGVRNFPCTMCDKRFYNGTLLRKHLVIHTEQELLKLIETDSNCNLNSKNCTQSESSFTEPEIIIKTDLEQNVYNEDLLSASGKSFTCNICEKTFPKKSKLRIHMDRHLGVKRFRCKICDKGSVEKYDLVKHINKVHEIIRDDVSEYIVVMKQNANAKTEPVVKGNVETEEVVKEETDQTDDLFNDGMFDDESVFDNETSYDTQRDTEELNIDCETCHKTFSERKKYDSHKCNKNKKFKCDFCNDRFAKKGLLEQHVKKSHSKIEKKLKSTSGSDDKTCKICNKSFSGKYKLSIHMNRHVGEKRFNCTQCDECFVEKSELTKHVEKTHSLSNMTNSDFQDNSDISSANEDDSTDKSVKYTLKCSLCLRMFRKKSNYDLHIKRHLGIRKFKCDICPRTYVTHYDLKRHLRTHGELTGFHCKQCYKSFDKSEELEAHMAVHANDAPIVCKECGKQFLMKGNLKLHMAVHSGIRPHLCTVCGRTFRVSRNLKVHMRIHNGEKPYACKTCGKAFAQSAALRVHLPTHSDEKRYVCQTCGKAYNRQNALYAHTRRHLGVRNFPCTMCDKRFYNGTLLRKHFVIHTEDSFISNIKKLCNEPSLVEPEIIIKTDPEQNANNEELSTESGKSFVCNICDKTFVKKSKLRIHMDRHLGVKRFTCKICDKGSVEKYDLVKHINKVHEIIRGNISEYIVVAKPDVNIESEIIVRDETMVKTETDIKNETEQSDTLIDNDEFYFDENELDTTVDSDNLCQTEIQEQNNADNGFLCATCNQTFKEQKKKMFAKKCFLERHIKQMHANKQLKDSTDNLCESQTIQEQTDFHCTTCNKSFKEQKKYDLHLKCHEDALNEDDKTCKICKKIFSGKYKLDIHMNRHMGIKRFKCTKCDKCFVEKNDLMKHIYKVHSFSDLSNEANKNACSPESPVSNTEETNEDSAVDNSFIKYPLKCDLCLQLFWKKSSYDLHLKRHLGIRKFKCDICLRTFVTHYDLKRHLRTHGELTGFHCKQCYKSFDKSEDLEAHMAEHADDSPLVCKECGKQFMMKGNLKLHMAVHSGVRPHLCTVCGRAFTLSSNLKVHMRIHSGEKPYNCKVCNKAFTQWASLRSHMAVHAEEKRFVCQTCGKAFRGQNTLRVHLRCHNGIRKIPCPLCDKRFYDKALLRKHFVTHTDEKKFKCETCGKAFNRADHLRVHSRTHRGERLYACEVCSKSFTQNQCLINHMKTHTDQVVHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-