Xxan016574.1
Basic Information
- Insect
- Xanthostigma xanthostigma
- Gene Symbol
- clz9
- Assembly
- GCA_963575645.1
- Location
- OY754472.1:36265592-36267307[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-09 9.1e-07 29.0 0.0 2 39 19 55 18 59 0.88
Sequence Information
- Coding Sequence
- ATGCCGAGACATTACCAGAAGAAGCTAGGCGGGcgtaattacaaaaattacagCGATGAGACTTTGGAGTCCGCGCTCGCTGCTATAAAAATGGGCATGTCACAAGCAGAAGCAAGCAGGCGGTGGAATATACCACGTGGGACTcttcaaaataaactaaatgGTACCCATAACAAGCCCCCGGGTCACCCAACTGTTTTTGAACCCACTGAAGAGCAATTGTTAACAAAAACTTTGGCGACTGTGAGTGATTGGGGATTCCCATTAACAAAAGCGGATATTCGCgatgttttgaataaatatgttgaaaagcAAGGTCGCGTAGTGCGCGAATTCCATAACAATATTCCTGGACACGATTTTATTGAGAACTTTATAAAACGAAACAACCTTAGTGCCCGTTTGGCATCCAACATAAAACGAGCTCGCGCAGCGATTGGACCAAACGATATTCGCGAGTTTTTTAACAACATTGAAGGTGCCTTGCGAGATGTCTATCCTCATCTCGTTTTTAACTATGATGAGACTAATGTCCAGGATGACCCCGGTGCAAAAAAGGTCATCGTTCCAAGAGGAACGAAGAGAGTAGAAAGAGTCCAACAGCACTCGAAAGCCTCGATAAGCATAATGGTGTGCGGAAATGCTGCAGGCAACTTGTTACCGCCAATGGTGGTCTATAAATCAGGATATTTGTACGAAAATTGGATGAGAGGGGGACCTCCGGGAACAATTTATGGAAATAGTGCTAGTGGATGGTTTGATATGATTCTATTTGAAAAgtggttttttgaaattttattgccCAAAATTAGAGAACTTGACAGTCCAGATCAAAAAATTGTAATCGGGGATAATTTGGCTTCGCATTTTTCACCGACTGTAATCCAGGCATGTGAAGAGAATAACATTTATTTGACACCCTTGCCACCCAACAGCACCCATTTAATGCAACCACTAGATGTTGCAGTCTTTGCaccgatgaaaaaaaaatggagagAGATTCTCGACAAATGGCGCAAAGAAAGTAGATCGGCTGGTTCAATTCCAAAGGAGCATTTTCCAACACTTCTAAACAGATTGTGGACAGCTGTAAGTGTGAATGTTTCAAATAATCTAATTTCGGGCTTCAGGGCCACTGGCCTGTCTCCTTTTAACCCTACAGAAGTTTTGAAGAAAATTCCTGACGGTTTACCACCAGACGAACAAGTCGAAGACAGAATTAACCAAAGTTTAATTGATGTTTTACAAGATATGCGCGGTtcaaataaagagaaaaaagtTGTTCGTAAGCGTGGTAAGAAGGTGGAACCAGGAAAACAACTTCATGCAAATGAACCCGATGCCGTGGAACCACAAGCTGGAACATCTTATGAAACACAGCAGGCTGGACCATCTGGAATACAGGAATTTAATAGTAACGATGAACAAAGTGACGATGATGTTCCTACTGTCACTAAAAAAACAGTTCCAGCACTCTTATCTAGGACCCAGCCAAAGAGGGCCAAAAAGAATAAGAAGACTGATGACGTTTGTGTAATTTGCTGGCGAGAATGGGAAACTTATCGTGGACCAGACTGGATTTCTTGTGTGGACTGCAAAAAGTGGGTTTGTGGATTCTGTAACGAAGGAAGTGACGACCCAGCTTTTCAGTGTGACTTTTGCATTAACAAATTTGACTCGGACGACAGTACAAAGGACAAGGACTTTGAAGTGTAA
- Protein Sequence
- MPRHYQKKLGGRNYKNYSDETLESALAAIKMGMSQAEASRRWNIPRGTLQNKLNGTHNKPPGHPTVFEPTEEQLLTKTLATVSDWGFPLTKADIRDVLNKYVEKQGRVVREFHNNIPGHDFIENFIKRNNLSARLASNIKRARAAIGPNDIREFFNNIEGALRDVYPHLVFNYDETNVQDDPGAKKVIVPRGTKRVERVQQHSKASISIMVCGNAAGNLLPPMVVYKSGYLYENWMRGGPPGTIYGNSASGWFDMILFEKWFFEILLPKIRELDSPDQKIVIGDNLASHFSPTVIQACEENNIYLTPLPPNSTHLMQPLDVAVFAPMKKKWREILDKWRKESRSAGSIPKEHFPTLLNRLWTAVSVNVSNNLISGFRATGLSPFNPTEVLKKIPDGLPPDEQVEDRINQSLIDVLQDMRGSNKEKKVVRKRGKKVEPGKQLHANEPDAVEPQAGTSYETQQAGPSGIQEFNSNDEQSDDDVPTVTKKTVPALLSRTQPKRAKKNKKTDDVCVICWREWETYRGPDWISCVDCKKWVCGFCNEGSDDPAFQCDFCINKFDSDDSTKDKDFEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01530062;
- 90% Identity
- iTF_01530062;
- 80% Identity
- iTF_01530062;