Xxan012687.1
Basic Information
- Insect
- Xanthostigma xanthostigma
- Gene Symbol
- -
- Assembly
- GCA_963575645.1
- Location
- OY754470.1:15912823-15913239[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-10 2.6e-08 33.9 0.0 4 38 18 52 17 55 0.93 2 2 4.6 8.5e+02 0.3 0.0 17 26 92 101 90 101 0.80
Sequence Information
- Coding Sequence
- ATGCCTCGAGTTAAAATTCGTACATCACAAAAAGCATCTTGGACTATTCAGTCTATGGAAAAAGCAATGGCAGCTGTTGGTAAAAAGAAATTGGGTATTAGAGAAGCTTGTCGTTATTACAATGTTCCATATAGCTCACTGCGCGACAGATTACGAATAGGAGTTTGCAAGGTTCCGCGACTGGGCCGAAAGACTACAATTTCAGCAGAAAATGAAAAGGAGTTAGCTGCTCACGTTCTTAAACTATCCAAATTGTTCTTTGGAATAACAACACTTAGCCTTCGGCGAGCTGCTTTTGAGTTTGTCACTAAAAATATCATTcagaataatttcaataaaaacgatAAAAGAGTcttagaaaaaattgaaaaaaaaacgtcaagaCAGAAAGACCACAAACGACTTGAAATTGTATGA
- Protein Sequence
- MPRVKIRTSQKASWTIQSMEKAMAAVGKKKLGIREACRYYNVPYSSLRDRLRIGVCKVPRLGRKTTISAENEKELAAHVLKLSKLFFGITTLSLRRAAFEFVTKNIIQNNFNKNDKRVLEKIEKKTSRQKDHKRLEIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01530010; iTF_01530011; iTF_01530012; iTF_01530013;
- 90% Identity
- iTF_01530011;
- 80% Identity
- iTF_01530011;