Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963575645.1
Location
OY754466.1:7754259-7764032[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-25 7.1e-22 78.1 0.1 2 89 90 173 89 173 0.94

Sequence Information

Coding Sequence
atgacAAGTGATAAGAATAAGCATACCGAAAACAAAAAAGGTGTATTTTTGGTCCCACCAGAAGCGCCTATTTTCAAACCTTCATCTAGAGAATTCACAGATCCCTTAGAATACATAAGCAAAGTGCGTCCAATGGCTGAGAAATATGGAATTTGCAAAATCATACCTCCTTCTAATTGGATACCACCATTTGCACTCGACGTGGACAAAATTAGATTTACACCAAGAATACAACGATTGAATGAACTAGAAGCAAGAGTCAGAATCAAACTGAATTTCTTAAAACAGATTTTGAAGTTTTGGGAAATTCAAGGCACAGATTTAAAAATACCAACAATTGGAAAAATTACATTAGATTTATATATGTTACATAAGGTTGTAAACGATTTTGGTGGATATGCGAATGTTAATAAGTCAAACAAATGGAGCGACGTTGCGAGACGTCTCGACTTTCGAAATGTCAAAAACATCGAGAGTAcgctaaaaaattattacagaCGAATCCTGCATCCATACGATGTATTTCGTTTACACAAATCAAAAATACAGaacaataattcaaataaaaatagggAGAATGATAATTGTTCTGATTTGGAAAAAAACACTTGCGATAGCAAAAAAAGCGACTCCTGTTCAAATAAGAAGTGTCCAAACTATGGcgacaataaaaaatgtagtataagtgaaaacaaaaacgaagGAAACTCCCAAAGAATCCAAACAAGAAAAGGTGAagacaaattagtgaattttgaaaatattgatgtAATAACGATTATAGATTCCGAAGAGGAAAATGAAAAAACATTCCAAAATATAAAATCCAAAAACACTGAACTACGACGTCTGCAGTTTTATAACGCGGGCGTTAAAATGGCTGGCTATACGAAACAACCTTTCGATTATGTTATATCGCCGGACGACTCAAAAACAACTAGATTCAGAAACATTAGCAATCTCAGTAAATGTTTCTGTGTCAATTGTAGACGAGGCGACGTAGAAGAATCTTTATTAATGTGTGAAGATTGCAATGACAATTATCACACATTTTGTCTGTTACCGCCGTTGTTTACTGTGCCGAATGGTAAATGGTTATGTCCCAAATGCATCGGCAAAACAGTTTCTTCTAAACCAACACAgGCATATGGATTTGAACAGGCTGACCGAGAATACAGCCTGCAACAGTTCGGACAGATGGCGGACGAATTCAAATCGGATTATTTCAACATGCCAGGATATACGGTACCTACCGATGTGGTCGAACAAGAATTCTGGAGGATATTGTCGTCGATTGACGAGGACGTAACTGTCGAATATGCGGCCGATTTACATACCATGGATCATGGATCCGGATTCCCGACGCACCATTCGCTGAATCTATTGGCCGGCGATAAAGAATATGTCGATTCAAAATGGAACCTAAACAATCTGCCGATTCTTAAAGGCTCCGTGCTGAAATATATCGACGACGACGTTTCGGGCGTGAAAGTGCCTTGGATGTATGTTGGCATGTGCTTTGCCACTTTCTGTTGGCATAACGAAGACCACTGGGCATATTCGATAAACTACCTCCATTGGGGCGAGCCCAAAACATGGTACGGTGTTCCGGGACACCACGCCGAAGcattagaaaaaacaatgatGTCTGCTGCACCAGAGCTGTTCGAATCGCAGCCCGACTTGTTGCATCAACTGGTGACTATAGTCAGTCCAAACTTGTTAATGGACGCGGGAATCCCCGTGTACAGAATGGACCAAAGCGCCAGAgagttcattgttacatttcccAGAGCTTATCACTGTGGATTCAATCAAGGTTATAATTTCGCCGAAGCTGTGAATTTCGCCCCATCTGATTGGATAAAGCACGGCAGGGAATCCGTCAACCATTATATGAGTGTTAGAAGATTTTGCGTTTTTTCTCATGACGAGCTAATTTGTAAAATGGCCTTGGAACCGAATAAATTGGATATTTCGATCGCTACAGAAGCTTGTAAAGACATGAAAGCGATGATTGAAAACGAAATGAAACTTATCGACTGTGTCGTCGAGTGGGGTATCGGTGAAAGGAGACAAGTTTTTTTCGAACTGTGTAAAGACGACGAGAGACTGTGCTTTGTTTGTAAAACCACTTGTTTTCTGTCAGCGTTTACATGCAAATGCAACAATGAGAGAAAATTTTGTTTACGGCATTGCATTTCGGAGTGTCAGTGTCCACAAGTCGATCGCGTACTTCTATACCGATACACGATGAACGAACTTTccgatatattttcaaaattggaaAAGAAAGTAAACCAATATCATTTTTGGCTCGGACGGGTCGAAAGTGCATTTGACGAATCGAAACCAAAAACTTTAGAATTTGTCGAGTTGAAACAGTTATTTATAGAAGGTAAACTGAATATGTTTCCTAAATCGGATTTGTTTACGAAGCTTTGCGTGGCGATCGAAAATTCCGAAAAATGTCTAGCCGTCATCAATCGCTTGGATCTGAATAAAATCAGGACGAGGCAATCGAGCGATTTGAAAGTGAAAGTCAGCGTCGAAGAAATGAAATTATTCTGCAATGAGATAAACAACTTGCCTTGCATTTTGAAAGAAGCAGATGTCGTCAAGGAATTTTTAAACAGAGCTGTTAAATTCGAAACCGAATCccaagaaatattggaacaagACATCGGAAGCGTTTCTTCAACAGATGTTAATAAATGCATCGATGACGGCTTATCTCTGCATGTTTTTGAGGTTAATAACTTGCATGGTTTGCAGAAACGATTGAAACAAATCAAATGGCTCGAAGAAGTTTGGTCTTTAAAAGATAACGTTAACACAGACGACTTACAACACTTACTTAACAGAGGTCTTGACTTGACATCGGACAGAATAATCGAGAAATATTTAGATAAAATACACGACATGCTCGTCATGACAAAAAGATGGGAGAATCGTGCGAAGAAATGTCTCAAATCGAAATCTTTTTCCACGATCAGGGAAATAGAATATTTGTTGACGTGCTCGAATAGAATTAAGGTCTTATTGCCGACCAAAAATAAGCTACGGGAAATTTTGAAGTGCGTCCGAGAATGGATCGACAAGGTGAATCGAATTCATTCGAACAACAAGCGTCCGTGTTATAGAGACATCGAAGAGATCGTGAGCagtggtaaaagtgtacatttgtTAGCGGAGAAAGTCAAGCCTTTCGAGGCGCAATTGAACGCGGCCGATTTGTGGAAAAATCACGCAACGAAATCGTTTCTGGAAAAGAAATGGAATTCATTCTATGCACTGATCGAATTGCTGAGTCCGAGGGTTTTGAAAAGTTTAGAGATCGACGAAAAATATACAGTGTTCGAAAACGATTTCAATAAAACGTACGTGGAATTGCAAAATCAAGAAATCGATTTCATTAAAATGCAGCGAAATAACAATCTtacaaaaactgaaaataacgATCGGCCATTTTGTATTTGTAAAGGTAAACGGTACGATTTCATGATCCGGTGTGAACTGTGTTACGATTGGTATCACATCAAGTGCATAAATACAGCGAATCAAACAACCAAATCGGATAAATTCCTGTGCATGCTTTGCAGACGAACTCAGAGGCCGAcgttgaaaaatatattgtcgCTGTTGATATCGTATCAGAAACTGAACTTGACTTTACCGGAGGGCAGCGCCCTACAGTGTTTAACCGAACGCGCTATGGATTGGCAAGAACGCGCTAAAAAACTGTTGAACTCCGAAGAGCtgcattttttcaataaacagTTATTACAAAATGAAGATAGAGTATCTTTAAATATGCAGCTGAAGAAATTGAAAAACGCGTCGGAAAAATCAAAGTCTTATTTGAACGCAGCCTCCCATCGATCGCAGCCGAGTACGTCGAAACATTTCGATCTTAAATGGATCGAACCGAATTCCCAACAGCCGGTTTTAGAAGATTCTAGAACTAATGCAGACGCAGAGATGCTCtcagttaacaaaaaataccaTTTCAAACCCACGAATAAACCGGAATATGACAAAAATGAATTTGATtctttttatagacaaaatataCAAAGCCACATTTTAAACGAATCGCTTCGACAAAATCTCGAAGAACTTATATTAGAAGGCGATTTGATTGAAGTTTCTTTACCCGAAAAAGAACATATATGGAAGTTATTGCAATTGCCCAAACAAAAAGATTTTACCGAATCGATAGTTTATTTTGAGAATGTAGATAAACAAAAAAGTGAACATCgcagtaaaaaaacaaatgaaacgaTCGATTTGACGAATACCGGTGGAAATGTGGATGtgcgaaaaagtaaaaaaattaaaatggatCCGAATGTCGGCTtccgtcataaaaaaatcaaaaaagaaaacggAGAAGGAAGAGATGTGATGTTTTACGACGAGCCTTGTTCGGCCGATGTTTGCACGCAACCGTCCGGAATGGGCATAGACTGGGTTCAGTGTGACGGTCCATGTAACCAATGGTATCACATGTGTTGCATCGGCTTGTCGAAGAAGGAACTGGCCAATAATGATCAGTTTCTTTGTTTGAAATGTTCATAG
Protein Sequence
MTSDKNKHTENKKGVFLVPPEAPIFKPSSREFTDPLEYISKVRPMAEKYGICKIIPPSNWIPPFALDVDKIRFTPRIQRLNELEARVRIKLNFLKQILKFWEIQGTDLKIPTIGKITLDLYMLHKVVNDFGGYANVNKSNKWSDVARRLDFRNVKNIESTLKNYYRRILHPYDVFRLHKSKIQNNNSNKNRENDNCSDLEKNTCDSKKSDSCSNKKCPNYGDNKKCSISENKNEGNSQRIQTRKGEDKLVNFENIDVITIIDSEEENEKTFQNIKSKNTELRRLQFYNAGVKMAGYTKQPFDYVISPDDSKTTRFRNISNLSKCFCVNCRRGDVEESLLMCEDCNDNYHTFCLLPPLFTVPNGKWLCPKCIGKTVSSKPTQAYGFEQADREYSLQQFGQMADEFKSDYFNMPGYTVPTDVVEQEFWRILSSIDEDVTVEYAADLHTMDHGSGFPTHHSLNLLAGDKEYVDSKWNLNNLPILKGSVLKYIDDDVSGVKVPWMYVGMCFATFCWHNEDHWAYSINYLHWGEPKTWYGVPGHHAEALEKTMMSAAPELFESQPDLLHQLVTIVSPNLLMDAGIPVYRMDQSAREFIVTFPRAYHCGFNQGYNFAEAVNFAPSDWIKHGRESVNHYMSVRRFCVFSHDELICKMALEPNKLDISIATEACKDMKAMIENEMKLIDCVVEWGIGERRQVFFELCKDDERLCFVCKTTCFLSAFTCKCNNERKFCLRHCISECQCPQVDRVLLYRYTMNELSDIFSKLEKKVNQYHFWLGRVESAFDESKPKTLEFVELKQLFIEGKLNMFPKSDLFTKLCVAIENSEKCLAVINRLDLNKIRTRQSSDLKVKVSVEEMKLFCNEINNLPCILKEADVVKEFLNRAVKFETESQEILEQDIGSVSSTDVNKCIDDGLSLHVFEVNNLHGLQKRLKQIKWLEEVWSLKDNVNTDDLQHLLNRGLDLTSDRIIEKYLDKIHDMLVMTKRWENRAKKCLKSKSFSTIREIEYLLTCSNRIKVLLPTKNKLREILKCVREWIDKVNRIHSNNKRPCYRDIEEIVSSGKSVHLLAEKVKPFEAQLNAADLWKNHATKSFLEKKWNSFYALIELLSPRVLKSLEIDEKYTVFENDFNKTYVELQNQEIDFIKMQRNNNLTKTENNDRPFCICKGKRYDFMIRCELCYDWYHIKCINTANQTTKSDKFLCMLCRRTQRPTLKNILSLLISYQKLNLTLPEGSALQCLTERAMDWQERAKKLLNSEELHFFNKQLLQNEDRVSLNMQLKKLKNASEKSKSYLNAASHRSQPSTSKHFDLKWIEPNSQQPVLEDSRTNADAEMLSVNKKYHFKPTNKPEYDKNEFDSFYRQNIQSHILNESLRQNLEELILEGDLIEVSLPEKEHIWKLLQLPKQKDFTESIVYFENVDKQKSEHRSKKTNETIDLTNTGGNVDVRKSKKIKMDPNVGFRHKKIKKENGEGRDVMFYDEPCSADVCTQPSGMGIDWVQCDGPCNQWYHMCCIGLSKKELANNDQFLCLKCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01510248;
90% Identity
-
80% Identity
-