Xspa017966.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Xanthorhoe spadicearia
Gene Symbol
nfxl1_1
Assembly
GCA_947086425.1
Location
OX352218.1:5653516-5655987[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 3 2.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 19 0.022 1.5e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 19 4.6e-07 0.0032 17.7 15.9 3 19 186 202 185 202 0.95
4 19 9.9e-08 0.00069 19.8 13.0 3 19 239 255 237 255 0.91
5 19 4.5e-09 3.2e-05 24.1 13.7 1 19 290 308 290 308 0.99
6 19 1.9e-05 0.13 12.5 18.1 3 19 345 361 337 361 0.86
7 19 1.6 1.1e+04 -3.3 0.5 7 11 365 369 365 369 0.87
8 19 8.9e-06 0.062 13.6 18.3 1 18 395 412 395 413 0.97
9 19 3.5e-08 0.00024 21.2 16.9 1 19 422 440 422 440 0.99
10 19 1.1 8e+03 -2.8 1.3 5 10 468 473 468 474 0.69
11 19 0.00031 2.1 8.6 6.4 9 19 488 498 486 498 0.89
12 19 0.0011 7.5 6.9 5.8 1 12 508 518 508 518 0.96
13 19 0.53 3.7e+03 -1.7 3.3 14 18 547 551 547 552 0.85
14 19 0.39 2.7e+03 -1.3 0.4 8 12 568 572 567 579 0.79
15 19 1.7e-05 0.12 12.7 4.6 1 11 588 598 588 599 0.97
16 19 0.7 4.8e+03 -2.1 1.3 14 18 612 616 612 617 0.85
17 19 3.1e-05 0.22 11.8 14.4 1 18 628 645 628 646 0.88
18 19 1e-06 0.007 16.6 12.4 1 18 687 705 687 706 0.87
19 19 0.97 6.7e+03 -2.5 0.1 8 12 722 726 721 726 0.75

Sequence Information

Coding Sequence
ATGGCGCGCCGCTATAAGGATGCAGCTGCGAAGATGCAGCAAAACGTGCAAAAGCATCTCAAGGACATGAAAGACTTGTCTTCTTCCGAAGATGAAGATCCTTACGAGCCCAGCGTCATCGAGGGAATGTTCCAGAGTTACTGGCGTGGAGGCGGAGATACTCAAATGCTGAACAGAACCAAGAATCTGCTGGAGGAAGCCATCAGCGGCCGATCGGTGGCTTGTCTCATTTGTATCAGTTCCATCAAGCGGAACCACGCCGTTTGGACCTGCGACCACTGCTACTCATACTTCCATCTCTCTTGTATTCAAAAGTGGGGTAACGACAGTATAAATCTGCGAAGCATCGAACCACAAGCTCCGATAAGCGTGTACAAGCCTCAGAAAATTGAATGGTGCTGCCCGAAATGCCGCAACGCGTACAGTAAAGATGAAATACCCAGAAAATATAGATGTTTTTGCGGCAAAACTGATAACCCGCCTGTTCATCCTTGGCTTATACCTCACACTTGTGGGGAGGTGTGCGAAAAGAGGCTATCTACTGGAGATAACTGTAAACACAAGTGTTTACTGCTATGCCACCCTGGTCCTTGCCCCCCCTGTCCTCAGACAGTCAACGGAATATGCTACTGTGAGAAGGAGCGTAAGAAAGTCAGATGCAGCTCAGCAAAATGGTCATGCGGCCAGCAGTGTAAAAGAACCTTACTCTGCCAGACACACAAATGTGAACTACTATGCCATGAAGGAGAATGCCAGCCATGTACTTACACCAGTTACCAACCTTGCCAGTGCGGAGCTGAGAAGACCAAGAGACCCTGTGATGATCCATTCTGGCATTGTACAAAGACTTGCAACAAACCATTCTCATGTGGATATCATAAATGTGAGCAAGTCTGTCACTCGGGTAAATGCGGAGACTGCCCCAACTCTGGCATGAGGTCCTGTCCTTGCGGTGCCAATCAGCGCTATGTCCAATGTCCTGACACTATGGAGACATGTCTCGGAACCTGTGGGAAGAAGCATTTTGATTGTGAACATAGTTGCCCAGAAAAATGTCATAAAGGCACATGTCCACCATGCCAAGTGTTGATCCAAAAGAAATGTCATTGCACAACACATACAAGATCCTTACCTTGCAGCAAGGAATATAAATGTGATACTAAATGTAGAGGCACTCGCCCATGTGGCAAGCATGGATGTGCCAGGAAATGCTGCAACGGAAACTGTCCTCCATGTGAAAAGGCTTGTGACAAGCCATTACAGTGTGGCCGTCATAAATGTACTACCATTTGCCATCATGGCCCTTGCTATCCTTGCCCATTGGAATCCAAAGTCAGCTGCAGGTGTAAAGAAACCTACGTAACAGTTCCTTGTGGTAGAGAAAGGTTCACCAAACCTCCGAAATGTCAGCTCCCATGCAAATTGAAATACAAATGTGGTCATGCAGATGAAAATAAACATTCCTGCCACTTTGGAGACTGTCCTCCGTGCAAAGCTATCTGCTACAAAACCTACCCTAAATGTGGACATGACTGCAAGGCAATATGTCATGAGTACAAAGCTGTTGTCTTCAAGCAGATAGAGAAACCTGCAACTCCTTGGGAAGTGCAGCCTCCAAAGACAAAGATCATGACTTTGGAATGTCCTCCATGTAACATGCCAGTCACTGTCATCTGTTTTGGTGAACATGAGACTGATGACCAGCCGTGTCACACTGCGTCTCGTAGACCATGTGGAAGAGAATGTGGGAAACCCTTGGCTTGTGGAAACCATAACTGCTCTTTACTCTGTCACCTCTACAGCCCTGATCCAGCTCACCCAAATGTACCCTTCAACTGCAGGCCATGTAACCGAGAATGCCTAAAACCTCGTCCTGAAAAATGCTCTCACAAGTGTTCTATAAAGGCTTGTCATCCGGGACCTTGCCCTCCATGTGACGCTTTCGAACGCATCCCATGCCATTGCGCTGTCACCGAGTTGTACTTACGATGTAGAGAATACAGCGCTGCTACAAATGAAATGTTATCTTGCAAGCAACAATGCCCTAAGAACTTAGAATGCGGGCATCGCTGCAAAAATACCTGTCATTCCGGACCCTGTAGCAACCAAGTGTGTACAAAGAAGACGAAAATACACTGTCCTTGTGGGAATTTAAAGAAAGACGCTCCTTGTCACACAGTCAAGAGCGGAGAAGCAAAAGTCCAGTGTGATGCATCATGTGAAGAAAAAAAGGCAGCAGCAAAGTTGGAGAGTGAGAAAGAGCAACGGAGACTTAAGGCGTTAGAAGAGGAGAGAAATAAAAAAGAACTGGCTGAATATGAATGGAAACTCAGTGGGAAAAAGAAGAAATACAAAGAGAAGAAGGTTGTGATCAATAAGGATGAACGTAACTGGGTTTATCGAAACTGGATGATTATTTTACCTATTTTGTTTGCACTGCTGGCAGTGGTTTATGTTATTGTTTCAAATTAA
Protein Sequence
MARRYKDAAAKMQQNVQKHLKDMKDLSSSEDEDPYEPSVIEGMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVACLICISSIKRNHAVWTCDHCYSYFHLSCIQKWGNDSINLRSIEPQAPISVYKPQKIEWCCPKCRNAYSKDEIPRKYRCFCGKTDNPPVHPWLIPHTCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICYCEKERKKVRCSSAKWSCGQQCKRTLLCQTHKCELLCHEGECQPCTYTSYQPCQCGAEKTKRPCDDPFWHCTKTCNKPFSCGYHKCEQVCHSGKCGDCPNSGMRSCPCGANQRYVQCPDTMETCLGTCGKKHFDCEHSCPEKCHKGTCPPCQVLIQKKCHCTTHTRSLPCSKEYKCDTKCRGTRPCGKHGCARKCCNGNCPPCEKACDKPLQCGRHKCTTICHHGPCYPCPLESKVSCRCKETYVTVPCGRERFTKPPKCQLPCKLKYKCGHADENKHSCHFGDCPPCKAICYKTYPKCGHDCKAICHEYKAVVFKQIEKPATPWEVQPPKTKIMTLECPPCNMPVTVICFGEHETDDQPCHTASRRPCGRECGKPLACGNHNCSLLCHLYSPDPAHPNVPFNCRPCNRECLKPRPEKCSHKCSIKACHPGPCPPCDAFERIPCHCAVTELYLRCREYSAATNEMLSCKQQCPKNLECGHRCKNTCHSGPCSNQVCTKKTKIHCPCGNLKKDAPCHTVKSGEAKVQCDASCEEKKAAAKLESEKEQRRLKALEEERNKKELAEYEWKLSGKKKKYKEKKVVINKDERNWVYRNWMIILPILFALLAVVYVIVSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857272;
90% Identity
iTF_00661917;
80% Identity
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