Basic Information

Insect: Xanthorhoe spadicearia
Gene Symbol: -
Assembly: GCA_947086425.1
Location: OX352213.1:7141930-7145488[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.1e-11 3.9e-08 33.1 0.0 4 41 23 60 20 62 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.1e-11	3.9e-08	33.1	0.0	4	41	23	60	20	62	0.90

Sequence Information

Coding Sequence: ATGTCTCCTCCGAGGGCTGTGGAAAAAATAAAGAAAAGAATAGTACGGCAAAAATATACACAATCATCGTTAAATCAAGCACTTCAAGACATTCGTAACAAAAAGATGTCGATAAGACAAGTTTGCAACCATTATGGGATTCCAAGATGTACCGTCCAAGACAGACTTGCCGGACGAACCACTGACCCAATCAAAAAACCAGGACCAGATCCAGTATTGACTATAGAGGGTGAAAAGGAAGTAGTCGAATGGCTTATAAACCTGGCAAAGTGTGGGTTTCCTTTGAAAAAAAAAGAACTTCTGGACACGGTTCAGAAAATTATTCAAGACACAGGAACACCTTCCAAGTTTAAAAATGATCGGCCAGGGCAAACTTGGTTTAAGAAATTTTTAAAAAGGCACCCTGAAGTTTCCCTTAGAACCGCGGAAGGTATAAACAAGGCGAGAGCACGGGTAacagaagaatcgatcaggctttggttccgtgaacttaaactctatctgacagagacaaataatcttgacatactagagtctccggagcgcttatttaatggcgatgaaagtgggtttgccatatgcccacaaactggcaaagttcttgggcccagagggtaccggaacttatatgaaataaaatctgggagtaaggacaacataacagttttggtgactttcaatgcaaatgcacagttgtgcccgccgctcgttgtcttcccgtatgtccgtccaccgaaacaactggtcgaaagcatgccacccaattgggttttaggcaagtctgaaagcggatggatgcggggtgatgtattttttgaatatatcaccaatgattttaacacctgggtggaagagaacggcattcaaaaacctatcttgttattggttgacggtcataaatctcacatgtcattggtgctgagtagttggtgtgagaagaaaggaattattctttatgctttgccgccaaacactactcatatgcttcaaccagctgatgttagtgtatttggccctctgaaagcttattggaaaaacgttgtcaggaattttctgtctaagcctgaaaatttgaattcatctgtgaccaaaacaaacttttgtgccctattccgcgaaaccatagaaatctcaaacatcaaagataacataaaaaatggattcatgaggtgtggcctatatccatttgatccggacgcagtagactacagtaaatgtgttttaaacacactggaaaaTTTGACAAGGCCGCAACCAAACAATGAAATAACAAATGCAGACTTAGTATCTACAAGGAAGGTTCTAAAACATCTAAAACCGGACTTGGCACACAAAAACATAAGCGTGCGTGTTATTTTGAAAGAAATGAAAAAACTTAAGAAAAGGAATCCACCTAATGATGAAGTTCTATATGAAACTTGCTCAGAAGATCGAACTAATTCAACGATTAACGATGCGTCAGCGTCTTTATTAGTTGATGAGGACAAAACCAACAGCAAGTTAGAGCTAGATATGACATCAGAAATGATTACTGACCCCTGTCATGCTTACAAAGATTCATCGAATGCTTTGGCAGACCATGAACATTTCAAAGTTCCAGAAGCTCCAAGCATTAGCAATAATACTGAATTGCAGACATTTTCACCATCAACTTCGTTGAACTATGAAATCGACGGTATTTCGTCACTGCATTTATCAGGCAGTTATTTAGAGGTCGGTTCTCTAGTATCGCTAGATGATATTTTGGTACTACCTTGCAGTACACCAGAAACACCACAGCAACAAATCAGCATTCCACCACCATTTATCGAAGCAACCAAAACAGTAGCAGAATCAAGTCAACCTATTTCGACTACACAGTGTTTGCTGCAAAGTAAACTGGATGAAATTCCACTGGACAATATAACACCCCAACGTAGTCAAAGAAGCACATCACCTGTAGAATGGCCGATAACTAAACACTCCATGGCCGGAAACTAA
Protein Sequence: MSPPRAVEKIKKRIVRQKYTQSSLNQALQDIRNKKMSIRQVCNHYGIPRCTVQDRLAGRTTDPIKKPGPDPVLTIEGEKEVVEWLINLAKCGFPLKKKELLDTVQKIIQDTGTPSKFKNDRPGQTWFKKFLKRHPEVSLRTAEGINKARARVTEESIRLWFRELKLYLTETNNLDILESPERLFNGDESGFAICPQTGKVLGPRGYRNLYEIKSGSKDNITVLVTFNANAQLCPPLVVFPYVRPPKQLVESMPPNWVLGKSESGWMRGDVFFEYITNDFNTWVEENGIQKPILLLVDGHKSHMSLVLSSWCEKKGIILYALPPNTTHMLQPADVSVFGPLKAYWKNVVRNFLSKPENLNSSVTKTNFCALFRETIEISNIKDNIKNGFMRCGLYPFDPDAVDYSKCVLNTLENLTRPQPNNEITNADLVSTRKVLKHLKPDLAHKNISVRVILKEMKKLKKRNPPNDEVLYETCSEDRTNSTINDASASLLVDEDKTNSKLELDMTSEMITDPCHAYKDSSNALADHEHFKVPEAPSISNNTELQTFSPSTSLNYEIDGISSLHLSGSYLEVGSLVSLDDILVLPCSTPETPQQQISIPPPFIEATKTVAESSQPISTTQCLLQSKLDEIPLDNITPQRSQRSTSPVEWPITKHSMAGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -