Xspa004328.1
Basic Information
- Insect
- Xanthorhoe spadicearia
- Gene Symbol
- msc1
- Assembly
- GCA_947086425.1
- Location
- OX352194.1:3641803-3659360[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-15 2.8e-12 47.1 0.0 19 89 823 893 802 893 0.84 2 2 1.7 3.8e+03 -1.5 0.0 59 86 985 1010 967 1011 0.72
Sequence Information
- Coding Sequence
- ATGGGAAGACCAAAGGCAAAACCAAGGGCGCAGCGAAAGTTTGCACAAGGTGCATTTATCCCCCAGCCACAAAATCAGCCATCATCTTTATCCACCATATTACCTGCTCGTGCCATTCACAGAGCAGTAAATAAACCTGGCCCAGTGACTTACAACAACTGCACTGTGAAGGACATGCTCACTCATATGAGCCTAGGAAAAATACATCCACATTTAAACCTATCCCCTATCGTCAAATTGGAATATGACCCTAACCTAATATTAAAAGCAGGAAATTTAGGTGTAAAAAAGAGAAGTATAGAGAACACTTTTTGTTCTAAGAAAAAGTATGAACTGCGCAACCGTCAAAATGTTGGGATGCGTCATGGCAGTGCTAGCGACAGTGGAGAAGATATGCCCTTAAGCTTTCTAGCAGGTGATTTAAGCCCCAGTCCGATAAAGACTAGATCTCTGGATGGTCTGAAACGTCGTGACCAGCAAGTGCTCCCGCGCCTCAGCCCCTCTTTAGCGGCAGACACCGCAACCGCGTCTCATACACAAAATAGCTCTGGGATCTCGGATTCACGCCTGCCACCCAACTTATCAAAAAAACCAAACAAGCCAGCCAAGGGAAAGGCTTTTGGTAAAATCAAAAACAACATGACAAAGAAAATCCGAACTCTCAGAGTTGCTCGAAGAGAAAGACTCAGATCTGAATTGAAATCGTCATCAGAACTCAACAACATGATTAAAGATGACACCAAACCGGATATCAGTACTCATCAACAGCCAACAGCTAAGTTAATCACTAAACAAGACAGCGCTGAGGCACCTCTAAAGGTGGAAACCAAGAAATCGGAAGAAACTCCAATAATACCTAGAAACACAGCCCCAAATGTGGCTACAAATTCAGCAAGCTGCGGTTCTGCCCATAATAGCACTCCTTTTAAATTACCAAAACGAAACACCCGTAAAAAATCTAACAAAAATATCTGTGCCTCACATTTACTGCCAGGCCTTCAAGAAATGCTACTTAGCACACCAACATCAGTTAGCTATTGTAACGCTTGTAAACGTTGCGAGTTGGTAAATAAATACAAAAAAGTGTATAGTATGCTACCAGTGAGCGATCCTTATGAGCCTGATATCCTAGCGACGACTCCTCGCGATGTGTACGATTTCGATTCAGACGACGAAGGGTTAAAAATCCTCAGGCGCGGTCGAGAGCTTGTCCGCAACGTACTTACCACCAAGAGGCTCTCCTTCTGGCTATGCAACTTAGAAATGACCTTGAAGAAAACAATGTTTCTTGATGCCTATAAACTTGGAACTCTAAAACGAAATCTCCAAATGGGAAAGGATGACGTAACCGTAAACAAGATCATCTCAAGAATCGACTACCTGAATCAGTGTTTGATGGAAGATAAAAAAGAACTTGAGGCAGTGAAGACTAAGCGTAAGGCAAAAGTTACGAAAAAAGTGGTTGCAGTAGCTAGTAAGCCGACTCTGAAGAGATCTAAGGAGCCTGATGAGCCTAATGAGCCGCAGTCACTAAGCGCTCCTAAGCGCACGCGGAACCAAATGCGCACTTCACTAAAAACAGAAGAAAATAAAAAAACCACTGTTAAAAAAGTCAGCAGTCCTTCACAAGGCATTTCCAATGCACCAGGTTCCAAGTCATCAAGGGCGTCCACTAGTCTAAAGGACAAAGTGCCCTTGACTGCACCAGCCAAAAAGTTGACCATCCCCTTAGTCTCTATTCCAATAATGGACGCTTCTTTAATCTCAAAAATTCAAGAAAACGACGTTTCTAAACATGCAAAAGTGCCAATTGACCTACCAGATAAGGAGTGTGATAGTCCACCGTGTAACGATACAACATCTCCAAACCCATTACCACCGAAATCTCTATCTTCTCAGACGGTAGAAGGTTTAAGCAAACCTCCATCAGAACAAATATCATCAGAACGGCGTCATCAATTACTACGTGTAACACCACAAGAGATACTTAATTCCACTACTCCAGCGATTGCTTCAACCAGTCGCTCTCATTTCACTCCGATAGCTAACTCGAATGCAAGCAATCCAGAAAGTTTCGCCGCTAGCACTATTAGAAGAACCCCGAACCGCACTGTATCGTTCGTGAATATGTTTTCTACAGAAGAAATGTTGTCTTTATTTCCAATTGAAGATTTAGATAACAAATTCGTTCCTGTGGAAAACTTAATATATAGGCCTACACCCGAAGAGTTCATAGATCCAATGGATTACATACGGAAAATTCAATCTTCTGCATCACAGTACGGAATTTGCAAAATCATTCCACCCGAAGGATTTGATGTCCCTTGCCATCTGGACGAAAATAGTATGTTTACTACTATCAACCAGTACCTGGGACGTTTATATCAGAGATGGGGGCAAACGTCGAGAGAGTTGACTGGTATTCAAACTTATGTCGCTAAAATCGCCAACCCAAGAGAGAGGGATCAGTTTACCAAATGCCCTATATTTGATGGCGTGGAGTTAGATCTAGTGAAATTGTACGACGTGGTGCTCGAACACGGCGGTATCGAGGAGTTGTTTGCTCACAGCGAGCGATGGGCTCGCATCGCCGAGCAGATGGGCCTCGTGTCGACGCGCGGCAAGCCCGATCATAAGAAACTGGAGAAGATATACTGCAAACATGTGCTGCCTTACGAATCTCTGACGCCTTACGAACGCGAAAAAATCTTACGTAAAGTTGACCTCGTGTGGCGAGAACGGTACCGATGTTTGTGCCGTCGCGCGCAGCGCCCCCTCCACTATCAGAAGCGAATGCTCGGCGAGTGCGAGAGTGACGACGACGAGCCCATACTAGCGGCAGACTTGAATGACGTGCGCACTGTCGGCAAGCCATGCTTCGACCGCATCGAGGAGTGCACGGCCAAAGGACGGACCATGAACCTCACTACTTACCGAAGGCTCGCTTCACAAATACGAGCGATGCATTTTCCGCCCGACACGAACCCAACCACGAAAGAAATTGAAGAAGCGTATTGGAAGATTCTGTCTCAGGGCAGTGAACATATTTGCGTGCAGTCGGCTTATATAGACACGGCTGTAGACAAGCTGGGCCATACTTCCGAACCCTGTAAGCCTGGTGGCAGCCATCCTTGGAACCTAAAGCGTCTCGGCGAGAACCCATCAAACGTGCTGAGCTTCCTCGGCAAGACGTTAAGTGTCACTAACCCAACGTTGAGCCTGAATCAACTTTACAGTACCAACTGTTGGCATAAAGACCCACACCTATTAGCGTGGATGGATTATATGCACCAAGGGTCCACTAAGATTTGGTACGCGGTATCAGAGAAACATTCAGGACTGTTCCGAGAGGCGATAGAACATCTGTCTCCTTTCGCCGTCCAGAACAAAGGCATTTGGCTAGCTTCGGACACTACCATGGTACCTCCCGGTTTGCTACTCGCCCATGACGTGAAGTTGCAGCGTATTGAACAGAACCCAGGAGAATTTATAGTTGTGTTTCCTGGTGCTTATGCGTCCTCCATCGCTACTGGACTCACAATATCGGAAAGCATTTACTTCGAAAATAAGGAGTGGGTTAACAACATTGATCAGATCTTCCAGCAAATGCGTGACGACTACGAACCTGGAATGTTCTCAAACATAGTGTTACTATTCCGAATGGCGCGCGATCCGACACTCAGCATGGAAGTGTTTCCATCCATTCATAAATCTATCGAAGGCATCATTAACAGCGAGCTGGCTATTCGCAAGGAGGCTGCCCGGCTTAACTTCAACCTGACGCTGGTGAAGCCGGAAGGTCTCGGGCCTGTCTCGTGGCCGAACCAAGAAGAGTGCAGCATATGCCGCGCGCCTCTCATTCTCTCCAAGACGGTTCGATATAATGAGCTTCGCTTGCTGATGTGCTTGAAACACGGCGTGCAGCTTTATAACTGCGCGCCGGCGGACGAGCGCGGTGCACCGCCCCCCATCATCATCATCTACACCGAAGAAGAATTACTACACATACTGGAGTCTGTGCAGCGTCGCGCAAGCGGCGAGGACATCTTTGATATCTCTGAGGAAGACTGCCACCCTGCTATAGATGTGACCGTCAAAATTGAAGAATACTTTGAAGGTGCAACCCCAGCTTTTTAA
- Protein Sequence
- MGRPKAKPRAQRKFAQGAFIPQPQNQPSSLSTILPARAIHRAVNKPGPVTYNNCTVKDMLTHMSLGKIHPHLNLSPIVKLEYDPNLILKAGNLGVKKRSIENTFCSKKKYELRNRQNVGMRHGSASDSGEDMPLSFLAGDLSPSPIKTRSLDGLKRRDQQVLPRLSPSLAADTATASHTQNSSGISDSRLPPNLSKKPNKPAKGKAFGKIKNNMTKKIRTLRVARRERLRSELKSSSELNNMIKDDTKPDISTHQQPTAKLITKQDSAEAPLKVETKKSEETPIIPRNTAPNVATNSASCGSAHNSTPFKLPKRNTRKKSNKNICASHLLPGLQEMLLSTPTSVSYCNACKRCELVNKYKKVYSMLPVSDPYEPDILATTPRDVYDFDSDDEGLKILRRGRELVRNVLTTKRLSFWLCNLEMTLKKTMFLDAYKLGTLKRNLQMGKDDVTVNKIISRIDYLNQCLMEDKKELEAVKTKRKAKVTKKVVAVASKPTLKRSKEPDEPNEPQSLSAPKRTRNQMRTSLKTEENKKTTVKKVSSPSQGISNAPGSKSSRASTSLKDKVPLTAPAKKLTIPLVSIPIMDASLISKIQENDVSKHAKVPIDLPDKECDSPPCNDTTSPNPLPPKSLSSQTVEGLSKPPSEQISSERRHQLLRVTPQEILNSTTPAIASTSRSHFTPIANSNASNPESFAASTIRRTPNRTVSFVNMFSTEEMLSLFPIEDLDNKFVPVENLIYRPTPEEFIDPMDYIRKIQSSASQYGICKIIPPEGFDVPCHLDENSMFTTINQYLGRLYQRWGQTSRELTGIQTYVAKIANPRERDQFTKCPIFDGVELDLVKLYDVVLEHGGIEELFAHSERWARIAEQMGLVSTRGKPDHKKLEKIYCKHVLPYESLTPYEREKILRKVDLVWRERYRCLCRRAQRPLHYQKRMLGECESDDDEPILAADLNDVRTVGKPCFDRIEECTAKGRTMNLTTYRRLASQIRAMHFPPDTNPTTKEIEEAYWKILSQGSEHICVQSAYIDTAVDKLGHTSEPCKPGGSHPWNLKRLGENPSNVLSFLGKTLSVTNPTLSLNQLYSTNCWHKDPHLLAWMDYMHQGSTKIWYAVSEKHSGLFREAIEHLSPFAVQNKGIWLASDTTMVPPGLLLAHDVKLQRIEQNPGEFIVVFPGAYASSIATGLTISESIYFENKEWVNNIDQIFQQMRDDYEPGMFSNIVLLFRMARDPTLSMEVFPSIHKSIEGIINSELAIRKEAARLNFNLTLVKPEGLGPVSWPNQEECSICRAPLILSKTVRYNELRLLMCLKHGVQLYNCAPADERGAPPPIIIIYTEEELLHILESVQRRASGEDIFDISEEDCHPAIDVTVKIEEYFEGATPAF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -