Basic Information

Insect: Xanthorhoe designata
Gene Symbol: Mtf1
Assembly: GCA_963582015.1
Location: OY757034.1:9504028-9512139[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 8.2e-06 0.00057 20.8 0.8 1 23 83 107 83 107 0.99

2 7 0.0048 0.33 12.1 0.4 1 23 113 137 113 137 0.98

3 7 0.00036 0.025 15.6 1.2 1 23 143 167 143 167 0.97

4 7 1.5e-06 0.0001 23.1 1.5 1 23 172 196 172 196 0.97

5 7 1.1e-05 0.0008 20.3 2.4 1 23 202 226 202 226 0.98

6 7 3.1e-05 0.0022 18.9 0.4 1 23 232 256 232 256 0.94

7 7 0.86 60 5.0 1.2 2 23 636 659 635 659 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	8.2e-06	0.00057	20.8	0.8	1	23	83	107	83	107	0.99
2	7	0.0048	0.33	12.1	0.4	1	23	113	137	113	137	0.98
3	7	0.00036	0.025	15.6	1.2	1	23	143	167	143	167	0.97
4	7	1.5e-06	0.0001	23.1	1.5	1	23	172	196	172	196	0.97
5	7	1.1e-05	0.0008	20.3	2.4	1	23	202	226	202	226	0.98
6	7	3.1e-05	0.0022	18.9	0.4	1	23	232	256	232	256	0.94
7	7	0.86	60	5.0	1.2	2	23	636	659	635	659	0.93

Sequence Information

Coding Sequence: ATGACACATTCGCGACAGTGGAAGGGCGTGCGGTCGACGCACTACCCGCTCAAACAACAAGTGGTACATAACGTGGATTGTTGGTGTTCGTTCAATATAACGGGAGTTCAGCCGGGAGTCCTCACCTCAGTCACAACAAGCGTTCTTGCCCGTCTTGTTAACAATGTCCCTGAAATGCCAAAAAGTATCAATGTTACAAATGCTATGGAGACGAATCAGAGAAAATCAGAAGATAATGGTGCAAGATACAAATGTGaatacgatggatgcgaacgaaCATACAGCACAGTGGGAAACCTACGGACACACATGAAAACTCATAAAGGTGAATACAGGTTTAAATGTCCAATGCAATCATGCGAAAAGGCTTTCCTCACATCATACAGTCTGAAAATTCATGTAAGGGCTCACACAAAGGCGAAACCGTTCACTTGCCAAACTGAAGGCTGCAGAAAAGCTTTTAACACATTATACAGGCTAAGAGCACATCAACGGCTGCATAGCGGCGACACTTTCAACTGCAAAGCCGATGGATGCTCAAAGTTCTTCACGACACTCAGCGACCTCAAGAAACATATCCGGACACATACACAAGAGCGGCCATACAAATGCGGTACCGAAGGATGCGGCAAGTCTTTCACCGCGTCGCACCATTTAAAGGCTCATGGGCGCACTCACTCAGGCTCGCGACCTCACGCTTGCTCCACGGCCGGCTGTGGACGTATCTTCTCTACCCCCACCAGTCTAAGAGCACATGCTAGGAAACACCAGGTTAAGATAGAAGCTGATCCGTGTGTGGATGTGTTGGACGAGCCTGCTGCCGTGAAAACTTCTGCAAATGAGCTCATGAATTGGGACGTGCTTTTAGAGTCGTTTGGAAAAATCAGCACGGACTGTACTTCTGACGGAGGTCTAGAGCTCGCAGCGGACGCCGTCGATTTCACTCAACTACTCTACGACCCTCCGAAATCAGAAACCAACGCTTTACCCATAGACTACGACCTCGCAAGCCTAACGCTCTCGCCCTTCGCCGACAAATCCGACAAAAAAGACTCCTGGGTCGAAATCAATCTACAGCCTACTGTCACGCTTCAACCCGCTCTGAAGATGGAGATCAAACCTAAAGCGATGCAACTTGCGATGGCCAATGAGTTCGAAGTGCAAGCCCCTTGGGTCGACGTCAGCGCATTAGCCGCATCTATCTCTGAAACTCCCGTTACTATAAAGGAGAAAACACCGGAAAGCATCTTCACCCTGGCTACTTTCGTACCCACTCACATGCAAAGCTACATCGACTTGAGCGCCGAGCAAGCGCCCACAGCGAATATAATGACTCACACTTCGTTCGACCTCGACACTCCCGAGATACTAGATGTTGGCGATAAAGTCTTCAACGACAGTGAAATCGTTCCCAATATAGAACACAGGAAGATGTACGACGGCAATGAAATCGTCGCAGATTTAGAGGAGTCTGCTAAACTGTTCATAGAAAACGAAAAAGCGACTTTACATCCTAAATCACAGGACATAGATTTGATGGGACCCAGCGAAGACAGGTCGTTGAACACTCCGCCGCCTTGCAAAGTTCACGAGGATATCGAGATAAATCCAGCGAATTCTGTGCTTTTCAACACTGAGTTAGATTTGGAAGATACGCTTCTGTTCGACAGCGAGCCTCCATCTGATATGTATGTCGTGAGGACCGAGAACATATTCGGGAAAGAGATTGCGAAGCGAAATGCTCTGCAGCAAATAACAGCCGACACCGGTATCTGCTCCTGCATGGATTGTAAATGCGAGCCGGGCGATGGAGAATGTCAGAAATGCAATCAAGAACCggaaaaaactaaatgttcagAAGATACCTGTTCTTGTGTGGACTGTAAGTGCGACCATGCGGCGATGAAATGCGTGGTCGGTTGCGGTCGAGCGACGGATACTAACGATAACACGTTTTTGCATTACCACAAAAGACACAACAACTCAACGAATTTGGAAGATTTGGGCATTTATACGGTTCATGAATGTGAAGACGTGGCTCCAGCTGTGAACAACTTGGAATGTGCTTGCAGTGGTGAGTCTAGTGGCAGTTGTTGTTCAAAATCCAACGAATCTGAGCCTAAAGAGGCATGCTGTGGTACCAGTGGAACTAGAAAGTGTTGCGTCACTATATGCTTCAAGAAATTGGAAGCATTCAAACAATTTCTAACCGACAATGAATTAATCCAAGCGCTCAAAGCGAGCAGCATCAATCTAACCACAAGCTTGTAA
Protein Sequence: MTHSRQWKGVRSTHYPLKQQVVHNVDCWCSFNITGVQPGVLTSVTTSVLARLVNNVPEMPKSINVTNAMETNQRKSEDNGARYKCEYDGCERTYSTVGNLRTHMKTHKGEYRFKCPMQSCEKAFLTSYSLKIHVRAHTKAKPFTCQTEGCRKAFNTLYRLRAHQRLHSGDTFNCKADGCSKFFTTLSDLKKHIRTHTQERPYKCGTEGCGKSFTASHHLKAHGRTHSGSRPHACSTAGCGRIFSTPTSLRAHARKHQVKIEADPCVDVLDEPAAVKTSANELMNWDVLLESFGKISTDCTSDGGLELAADAVDFTQLLYDPPKSETNALPIDYDLASLTLSPFADKSDKKDSWVEINLQPTVTLQPALKMEIKPKAMQLAMANEFEVQAPWVDVSALAASISETPVTIKEKTPESIFTLATFVPTHMQSYIDLSAEQAPTANIMTHTSFDLDTPEILDVGDKVFNDSEIVPNIEHRKMYDGNEIVADLEESAKLFIENEKATLHPKSQDIDLMGPSEDRSLNTPPPCKVHEDIEINPANSVLFNTELDLEDTLLFDSEPPSDMYVVRTENIFGKEIAKRNALQQITADTGICSCMDCKCEPGDGECQKCNQEPEKTKCSEDTCSCVDCKCDHAAMKCVVGCGRATDTNDNTFLHYHKRHNNSTNLEDLGIYTVHECEDVAPAVNNLECACSGESSGSCCSKSNESEPKEACCGTSGTRKCCVTICFKKLEAFKQFLTDNELIQALKASSINLTTSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00662650;
90% Identity: iTF_01529610; iTF_00267647;
80% Identity: -