Basic Information

Insect: Xanthorhoe designata
Gene Symbol: -
Assembly: GCA_963582015.1
Location: OY757057.1:3289305-3302461[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0027 0.19 12.8 0.9 1 23 328 350 328 350 0.98

2 11 0.01 0.71 11.0 10.7 1 23 357 379 357 380 0.94

3 11 0.085 6 8.1 3.6 1 23 384 406 384 406 0.97

4 11 0.44 31 5.9 2.0 1 23 411 434 411 434 0.87

5 11 0.0036 0.25 12.4 0.2 1 23 438 461 438 461 0.94

6 11 0.64 45 5.4 0.4 3 21 475 493 474 498 0.91

7 11 1.3 91 4.4 0.7 2 23 546 568 545 568 0.95

8 11 0.032 2.2 9.5 0.7 2 20 584 602 583 605 0.91

9 11 1.7e-05 0.0012 19.7 1.7 1 23 611 633 611 633 0.99

10 11 1.9e-05 0.0013 19.6 5.9 1 23 640 662 640 662 0.98

11 11 0.00024 0.017 16.1 1.0 1 23 668 691 668 691 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0027	0.19	12.8	0.9	1	23	328	350	328	350	0.98
2	11	0.01	0.71	11.0	10.7	1	23	357	379	357	380	0.94
3	11	0.085	6	8.1	3.6	1	23	384	406	384	406	0.97
4	11	0.44	31	5.9	2.0	1	23	411	434	411	434	0.87
5	11	0.0036	0.25	12.4	0.2	1	23	438	461	438	461	0.94
6	11	0.64	45	5.4	0.4	3	21	475	493	474	498	0.91
7	11	1.3	91	4.4	0.7	2	23	546	568	545	568	0.95
8	11	0.032	2.2	9.5	0.7	2	20	584	602	583	605	0.91
9	11	1.7e-05	0.0012	19.7	1.7	1	23	611	633	611	633	0.99
10	11	1.9e-05	0.0013	19.6	5.9	1	23	640	662	640	662	0.98
11	11	0.00024	0.017	16.1	1.0	1	23	668	691	668	691	0.93

Sequence Information

Coding Sequence: ATGAGGTGTGTGGTTCCGGGCTGCAAGAATGATTCGAGGAATAACTTCAAGTCGGAAGGCATCACTTTTCACTCGTTTCCGATGGAGCCCTCAATGCGTAAGTCCTGGCTCGAGGCACTGGACAAGCCGGCCTGGCAGCCGAAAGAACGCAGCACTATTTGCTCCGAGCACTTCCTGCCTGAAGACTTGTATGAGACTCCTTGTGGACTGAGGAAGGTGCGGGCTGGGGCTGTCCCTGTCATCACTCAGGTATGCAGAATGTGCCTGGTCATAAGCCGCAGACTTTTCTCAATAAGAACATATAAATTGGAAGAAGCGTTTGAACGTCTGACTGGATTATCTGTGAACGAAGACGACCGCTTGCCACGAAGTCTGTGCGCGGAATGCGCCACGCGACTTCGCAACTGTGATGTGTTCAGAGACAGATCATTGCGCGCTCACTCTCTTATGATTAGCCTCCTGAAGACACAGCTACACCTAACAACAGACACACTGAGTACAATATCCGACGAAATACCAACTATATTACATCAAAAGCACAACCCGATGGATCGCTATGATTTCATACTAGAACATTCAGATAAAGTCGTAACAGACGAAATAAAACCAGTTGACGATATCGACATTAAAAACGAAGATATGAACGACAATGAAATATTCGTGGACGATTTCAGCCCAAAAGACGAACCGTCCAAAGATTTTTCTGAACCAGAGAGCGAGAATGTAGTACAATCGGACAAAGATTTCGACACAGATGATAGCTTACCACTGGAAGTTGctagaaagaaaaagaagaaaaagcctaaagaaaagaaagagaaaaaaataaaacttactgaACCTAAGATAGACAGAAGACGCAAACCTTTTTTGAACCAAGATCTCAATGAAACTTTATTTACCATCACTGATTTGACAATCGAAGAGCAGTTAGCGGAAGTTTTGAAGAGGCAAGAAACGGATAATTATAAGCACTCGGTGTTCAAATGTACGGAGTGCTTTAAAGGGTTTTTGGATCAAGATGCCTATACTAGTCATATGGTTAGACATACAAATGAATGCGGCGAGCACCGCTGTGACATCTGCAAGACTCACTTCAAGCACTCTCACGCGCTTCGCAAGCATATAACAGCTCATCATCTGCAACGATTCAGCTGTAACCACTGTCCGTACGTCACCACGCATCGGCAGACAGCGAGGTTGCACGAACGATGGCATAAAGGGACTAAATACCAGTGCCCGCATTGTAACCTCGAGTTTCTTAAGTTCACAACATACATGGGACACGTGAGAATCAAGCATCCATCTGACTTCGTTTGCGAGCTCTGCGGGTACTCCTTCGTCAGCGCTAAAGGCATAGAGCTGCACAAGAAACTCAAACACAGAGGCGATGATTCTGCAATACCAGTAGACGGTCCAGCCTGTGAGCTGTGCAACGTACGCTTCGCAACTTCGGAAGCGCATCGGAAGCATCTGAATGTTTCGGCGAGGCATGCCGGATCGCAGCGGGAGAACAACAAGCCCACGCGTGGACGTAAGCCCACGGATCAAGCTGATAGAGATAAATTGAAGACTGATGATGAAGAGAAACGAAGAATGTACCCCAGTCAGTTGCGGAAAGTGGAGGGGCCCATATCCTGTGAACAGtgcGGTATGCAGCTAGAAGACTCCCGCGCGTACCACGGTCACTTCCGGCGGATGCACCCGGACAAGAACCGAACCAACTACCCCTCTATGAAGTCGCCGTGCATGTGCGAGGTCTGCGGGAGAATCTTCCAAAGTTTCGCGCTTCTTAAAGACCATCGCTGGGTCCACACCGGTGAGCGGCCGTTCAAGTGCGACCAGTGTGATAAGAGCTTCCGCATGAAGCAGCGCCTGGTCGCGCACCGCCGCGTGCACAGCGAGGCGCGGACCAGCTACAGTTGCAATGTGTGCGGGAAACACTTCTCCACGCATAGCAATAGGCAGAGGCACATGTTTATCCACACTGGCCTAAAGCCCTTTTCATGCGAGATGTGTGGCAAGGGGTTCAAGCACGCGAGTGAGAAGCGCGCGCACGTCACGTACGTACATCTCAAGAAGCCCTGGCCGAAGCGGGCACGGACCAAGCGACCGCACAGACCGGGTTCAGCGGGTGGTACGGGTGCGAGCGAGATAGATATACAGCCGGCGTGGCCCGCCTGTGATCCCAAACTGGCTGATATCAACATGATGGATGACAAACCCTTATACTATAGATAA
Protein Sequence: MRCVVPGCKNDSRNNFKSEGITFHSFPMEPSMRKSWLEALDKPAWQPKERSTICSEHFLPEDLYETPCGLRKVRAGAVPVITQVCRMCLVISRRLFSIRTYKLEEAFERLTGLSVNEDDRLPRSLCAECATRLRNCDVFRDRSLRAHSLMISLLKTQLHLTTDTLSTISDEIPTILHQKHNPMDRYDFILEHSDKVVTDEIKPVDDIDIKNEDMNDNEIFVDDFSPKDEPSKDFSEPESENVVQSDKDFDTDDSLPLEVARKKKKKKPKEKKEKKIKLTEPKIDRRRKPFLNQDLNETLFTITDLTIEEQLAEVLKRQETDNYKHSVFKCTECFKGFLDQDAYTSHMVRHTNECGEHRCDICKTHFKHSHALRKHITAHHLQRFSCNHCPYVTTHRQTARLHERWHKGTKYQCPHCNLEFLKFTTYMGHVRIKHPSDFVCELCGYSFVSAKGIELHKKLKHRGDDSAIPVDGPACELCNVRFATSEAHRKHLNVSARHAGSQRENNKPTRGRKPTDQADRDKLKTDDEEKRRMYPSQLRKVEGPISCEQCGMQLEDSRAYHGHFRRMHPDKNRTNYPSMKSPCMCEVCGRIFQSFALLKDHRWVHTGERPFKCDQCDKSFRMKQRLVAHRRVHSEARTSYSCNVCGKHFSTHSNRQRHMFIHTGLKPFSCEMCGKGFKHASEKRAHVTYVHLKKPWPKRARTKRPHRPGSAGGTGASEIDIQPAWPACDPKLADINMMDDKPLYYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01529578;
90% Identity: iTF_00661714;
80% Identity: iTF_01528356;