Basic Information

Insect: Xanthorhoe designata
Gene Symbol: -
Assembly: GCA_963582015.1
Location: OY757057.1:4079556-4103392[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0028 0.19 12.8 2.9 1 23 353 376 353 376 0.98

2 19 0.0074 0.51 11.5 2.6 2 23 384 406 383 406 0.95

3 19 3.4 2.4e+02 3.1 1.8 1 23 410 432 410 432 0.97

4 19 0.37 26 6.1 0.4 1 23 437 460 437 460 0.94

5 19 0.028 1.9 9.7 0.6 3 23 501 522 500 522 0.98

6 19 0.03 2.1 9.6 0.5 1 20 530 549 530 554 0.94

7 19 0.15 10 7.4 0.2 3 23 630 650 629 650 0.97

8 19 0.0087 0.61 11.2 2.5 1 23 656 678 656 678 0.96

9 19 0.0014 0.099 13.7 0.6 1 22 683 704 683 704 0.97

10 19 0.74 52 5.2 4.6 1 23 1022 1044 1022 1044 0.96

11 19 0.092 6.4 8.0 0.4 1 23 1051 1074 1051 1074 0.92

12 19 0.0056 0.39 11.8 1.2 1 23 1105 1127 1105 1127 0.98

13 19 4.1 2.8e+02 2.8 0.2 2 23 1135 1157 1134 1157 0.95

14 19 0.0068 0.48 11.6 0.1 2 23 1170 1192 1169 1192 0.91

15 19 0.037 2.6 9.3 1.2 1 20 1199 1218 1199 1223 0.93

16 19 0.0074 0.52 11.5 0.1 3 23 1299 1319 1298 1319 0.98

17 19 0.05 3.5 8.8 0.6 1 23 1325 1347 1325 1347 0.95

18 19 0.00012 0.0084 17.1 6.8 1 23 1352 1374 1352 1374 0.98

19 19 0.037 2.6 9.3 0.9 1 23 1380 1403 1380 1404 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0028	0.19	12.8	2.9	1	23	353	376	353	376	0.98
2	19	0.0074	0.51	11.5	2.6	2	23	384	406	383	406	0.95
3	19	3.4	2.4e+02	3.1	1.8	1	23	410	432	410	432	0.97
4	19	0.37	26	6.1	0.4	1	23	437	460	437	460	0.94
5	19	0.028	1.9	9.7	0.6	3	23	501	522	500	522	0.98
6	19	0.03	2.1	9.6	0.5	1	20	530	549	530	554	0.94
7	19	0.15	10	7.4	0.2	3	23	630	650	629	650	0.97
8	19	0.0087	0.61	11.2	2.5	1	23	656	678	656	678	0.96
9	19	0.0014	0.099	13.7	0.6	1	22	683	704	683	704	0.97
10	19	0.74	52	5.2	4.6	1	23	1022	1044	1022	1044	0.96
11	19	0.092	6.4	8.0	0.4	1	23	1051	1074	1051	1074	0.92
12	19	0.0056	0.39	11.8	1.2	1	23	1105	1127	1105	1127	0.98
13	19	4.1	2.8e+02	2.8	0.2	2	23	1135	1157	1134	1157	0.95
14	19	0.0068	0.48	11.6	0.1	2	23	1170	1192	1169	1192	0.91
15	19	0.037	2.6	9.3	1.2	1	20	1199	1218	1199	1223	0.93
16	19	0.0074	0.52	11.5	0.1	3	23	1299	1319	1298	1319	0.98
17	19	0.05	3.5	8.8	0.6	1	23	1325	1347	1325	1347	0.95
18	19	0.00012	0.0084	17.1	6.8	1	23	1352	1374	1352	1374	0.98
19	19	0.037	2.6	9.3	0.9	1	23	1380	1403	1380	1404	0.96

Sequence Information

Coding Sequence: ATGCAAAGTGACAGGCGAGGGTTCTTCAATTACAAGTACCATCATACTATcgtagataaaaataaaacgacAGAAACTAATGAACCACAAAATGATGCATTCAAGAATGATTCAGAACGAGAAGTAATGATTGAAACAGATTCAATTAAAATAGAAGTTGACAGTCTCGAAGATCCTATAGGCGTTGGAGATGACGCAAAAGAATATGATGCTAAGATAAATGACGCGAGCGTTAAAGATGAATATATAGAGATTGATGTAAGCAAGTTGGTAAATGACGCAAGCGTTGAAGATGAACACATAGAAAATGATGCAAGCGTTGAAGATGAAGACACAGTAAATAATGCAAGCATTGAAGTTGAAGACATAGAAAATGATGCAAGCGTTGAAGATGAAGACATAGAAAATGATGCAAGCGAATTACATAATTTAGATGATATAGATGACTTGCACAATAGTGACGATGAATATGTTGAAGCATATCTCAGGGAACTTGAAATGCTATCTACACCTAAAGacgaaactataaaaaaagaatcatctaaAACAGATTTAAGTTGCACAACACCTGTTATAAAACAGAAAAAGGCCAAAACAGTCGAAAAAGAAAAATTCACATTGGCTCAATTAGAAGCATTGCGGAACGAATCATTTGATCTAAATGATTTTACAACAGATGAGCtggaatgtattaaaaaatgtttgtctCCTCAACAGAAGAAGGAACTAAGTTTTCGAAAGCAAGTTGAAAAATTTAAGCAAAATTGTCTCAATGCTTTGGATCAAGGGAAAGTAGATTTGGGTGAGGTGACAATGACTAAAGAATTGTTTCTGGAAATGTTTGCGAAGAGTAACACATCTTATATCAAGAAACTTGGATATAAAAATTGTGCAGCGGTAGACATACTGAAGGTGAAGAAGTTTATGCTGTACCTTCTTAATAGGTTCAACCCAAAATATGAGACCGTTTTCAAAATAGACTACCTTAATACGCAAGAACTAAAACTTAAGGAATTTGAGTCAAGGAAGAACAGCAAACAATATATTGAAGCCGCGTACAAGTGTGAAAAATGCTACCAACCGTTTGTTCATCAACTTAAATTGAAATATCATATTAAGATGTGGCATAATCCGACGCCGAATGATATAGTGTGTAATATATGCACAATGCGTTTTGCATCCCATTCTACGTACAGATCGCATCGCAAGAACAACCATGCCGAGGTTTACACGTGCCGACTGTGTCCCTTAGTGACATATCATTTtTCCGTCATGATAAATCATTACAACCAACACAAGGGCGTCGTGTACCAATGTGAAACTTGCTTGAGCGTCTACGCCAACAAGACGACATTAGACAGCCATCGTGGGAAAGTGCACGCGACCTCTTACATCTGCACAGCGTGCGCGCGCACCTTCCTCTCAGAGAACGGACTGTCCTTCCACAAGAAATACAAGCATAAGgaCTCGGCCGTGGCGGACCCCGCCGACGCTACCTTATGTACAGAATGCAACATTACATTTGACTCGCACGCGGTTTACTTACGACACGCTAGAACCGCACACAAGGAGCGATATGGGACTGAATACAAGTGCTACTACTGTAAAGAAGGCTTCGACAGCATAGAAGCGCTTCGGCAGCACAAGGTTGAACTGAACCACCAGAGGGCGCCTCAAGAGGAGATACACGGGAGGTCTGTAGGCACTAAGCCGAGTGGCGCAAACAGAACCAAGCGGGTCAGTGACCTCAAGAAGCCGTACAGGAAATGCCCAGTATGTCAAGTAAACGTTCCGAACTCATTCGGCTCGAGTATGTACAGACACTATCGGAAGGCACATCCGGATGTACCGTACGACCCACTGCACAAGGGCTCCAAGGAACTCCTGTGCGAGCAGTGCGGCATGACTTTCGGGGTATACAGCTACTACCTGGACCATAAGAACCTGCACACGGGGGCGAAGCCCTACGCCTGTAAGCAGTGTCCCGCGCATTTCGCGACCAGGAGGCACCTAATGATTCACTCGGAGAGACATCGCCCGCCTCGCTACCAGTGCAAGCAGTGCGGGAAACTGTTCCTCAGCGCCGCTAACCTGTTCAACCACCGCCGGACGTATGAGAACCAGAGCCTCTTGTACTGCCGGCTGTGCGAGCACCAACTCCGGAAGTGTTACAGCTTCAAGCAGAGGTGTCTGCGCGCCAATGCGCTCATCAAGGCATGGCGGAAGAAGGGCTTGGCGaTATTTCCGAAGACCCTCCACGTGCTcctccccccctcccccctcggGTACTGCTCCCCCCTGGCGCGGCGTCACACCACAGAGTATATGTACCCGGACCACGGACCTGCGCGCGCAGACACCGAGCTCCGCTTGTTCCAATCACAGGAGGATGAGGACGTACCGCTGAGCAGTATGCGAATGACAGATGTAGAGATACACTTGAAAGAGCTGGAGTTGGATCTGAAGAGGGAACACGACTGTGCGTCCGAGGGTAGCGGGTTCGGATCCGACGACGTGGACAGCGATCTGGAACAAATTATGGACAGATACATCAAATCGGAGATGAAAAAACCAAACACTCGCTCAAAAAGTAAAACGTCACCGAAAACTAAACAGAAAAAGAAAATTGAGCAGAAATCAACGAAACGCAAAGTCAAAACGAAAATTGAATTCGCCGATGTAGACGGAGACAACGATTTGGGTAATGACATCGATGTTAATGGCGTCGATGTAAACGACGTCGATGTAAATGACATTGATGTTAACGATATTGATGTAAATACTGAAGACACTAAGATAGAAATAGACGACAAATCTCCACAATCGGACaagaaatacataaatataaaacagaGGGTCATCGAAATACTGGATCGAGGCGAAATACACGAGTTAGCGGACAACGTGAAGATAACTAAGGAAATATTCCTCAAAATATACGATAACTTCCTTCTGTCTGATATGAGGATGCTGTCGTTGAAGAAAGaATACCTAGACACAGAAGAGAAGAAGCTGGCAGAGTTCAATCGAAGAAAGCACAGCCAGAGCTACATGGACGCGAAGTATAAGTGCGAACTCTGCTACCGCGGTTTTGAGAAGCACACGCAGTATCAGTACCATAACAAATGGCATACGTCAGCGGCGGGTGAGTTCGAGTGCGGTATATGCGGCATGCGCTTCCAGTCGCTGAAGACCCGCGCCAGCCACCGGGCCTCCTCGCACTCCGCGGTCTACTGCTGCAAGATGTGCCCACTCATCACCTACCACTATCCTGTCATGTTGAATCACTATGAGCAACACAAAGGCGTGGAGTATTCATGTCCTACTTGCCTCAGCGTATTCGAGAATAAAACAACGTTTATGAACCATCAACGCGACCACAACGCAGACAAGAAGAAATCCACATGCGCTTCGTGCGCCATGACCTTTATATCAGACGTCGGGCTCATGCTGCACAGGAAGTCTAAACACACGGATGACGTGCCGGGGAACCCCGGTGCTCACTCCACGTGTCAGGAGTGCGGCATCACATTCGACACGGCCGATGTTTACAGAAAGCACGTGGCACTAGCGCACACCAAGAAAGTAGAGTCTCACCGCTGCGCCTACTGCCACATCCGCTTCGGCAGCCTCGAGGAGTTGAGGACACACAAGGTGGAGCAAGGTCACCAGCGAGCCTCCAAGAAGTACGCGCAGCGCTGGCTGCGGACCAACGACGTGAACCCCGTCAAGAAGATTAAGATCAACACGCCGGACAAACCGTTTATTAAGTGCGAGCTGTGTCCGGCCATGGTGTCGACAGCGTTCACGTCGTGTATGTATAAACACTTTCTAAAGGATCATCCAGACATCCCCTACTCGTCCGTGTACTCGCAGACCGCGCGACGACTGCTCTGCGACCTGTGTGGGAAGACCTTTATGGACCCGGCGTTCTTCGCGGACCACGCGAACATGCACTCGGGGGCGAAGCCCTACCTGTGCGCGCAGTGCCCCGCGCGCTTCGCCACGCGGCGCCACCTCGGGCTCCACGCGCAGCGCCACGGGCCCGCGCGGCACGTCTGCAACCATTGCGGGAAGAGGTTCCACAGCGCCGCTAATCTCTATAACCATCGGAAGACGCACATCGGCGACCGGCGATTCAAGTGCGAGATATGCCTGAAGGGTTTCCTCCACGCCGCCACGCTCAACGAACATGTTCGCGGAGTGCATCATCACATACGGAAACAGAAGCCGCCTCGGGACCGCAAGAACagctattaa
Protein Sequence: MQSDRRGFFNYKYHHTIVDKNKTTETNEPQNDAFKNDSEREVMIETDSIKIEVDSLEDPIGVGDDAKEYDAKINDASVKDEYIEIDVSKLVNDASVEDEHIENDASVEDEDTVNNASIEVEDIENDASVEDEDIENDASELHNLDDIDDLHNSDDEYVEAYLRELEMLSTPKDETIKKESSKTDLSCTTPVIKQKKAKTVEKEKFTLAQLEALRNESFDLNDFTTDELECIKKCLSPQQKKELSFRKQVEKFKQNCLNALDQGKVDLGEVTMTKELFLEMFAKSNTSYIKKLGYKNCAAVDILKVKKFMLYLLNRFNPKYETVFKIDYLNTQELKLKEFESRKNSKQYIEAAYKCEKCYQPFVHQLKLKYHIKMWHNPTPNDIVCNICTMRFASHSTYRSHRKNNHAEVYTCRLCPLVTYHFSVMINHYNQHKGVVYQCETCLSVYANKTTLDSHRGKVHATSYICTACARTFLSENGLSFHKKYKHKDSAVADPADATLCTECNITFDSHAVYLRHARTAHKERYGTEYKCYYCKEGFDSIEALRQHKVELNHQRAPQEEIHGRSVGTKPSGANRTKRVSDLKKPYRKCPVCQVNVPNSFGSSMYRHYRKAHPDVPYDPLHKGSKELLCEQCGMTFGVYSYYLDHKNLHTGAKPYACKQCPAHFATRRHLMIHSERHRPPRYQCKQCGKLFLSAANLFNHRRTYENQSLLYCRLCEHQLRKCYSFKQRCLRANALIKAWRKKGLAIFPKTLHVLLPPSPLGYCSPLARRHTTEYMYPDHGPARADTELRLFQSQEDEDVPLSSMRMTDVEIHLKELELDLKREHDCASEGSGFGSDDVDSDLEQIMDRYIKSEMKKPNTRSKSKTSPKTKQKKKIEQKSTKRKVKTKIEFADVDGDNDLGNDIDVNGVDVNDVDVNDIDVNDIDVNTEDTKIEIDDKSPQSDKKYINIKQRVIEILDRGEIHELADNVKITKEIFLKIYDNFLLSDMRMLSLKKEYLDTEEKKLAEFNRRKHSQSYMDAKYKCELCYRGFEKHTQYQYHNKWHTSAAGEFECGICGMRFQSLKTRASHRASSHSAVYCCKMCPLITYHYPVMLNHYEQHKGVEYSCPTCLSVFENKTTFMNHQRDHNADKKKSTCASCAMTFISDVGLMLHRKSKHTDDVPGNPGAHSTCQECGITFDTADVYRKHVALAHTKKVESHRCAYCHIRFGSLEELRTHKVEQGHQRASKKYAQRWLRTNDVNPVKKIKINTPDKPFIKCELCPAMVSTAFTSCMYKHFLKDHPDIPYSSVYSQTARRLLCDLCGKTFMDPAFFADHANMHSGAKPYLCAQCPARFATRRHLGLHAQRHGPARHVCNHCGKRFHSAANLYNHRKTHIGDRRFKCEICLKGFLHAATLNEHVRGVHHHIRKQKPPRDRKNSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -