Xdes023901.1
Basic Information
- Insect
- Xanthorhoe designata
- Gene Symbol
- ZFY
- Assembly
- GCA_963582015.1
- Location
- OY757058.1:1794955-1800443[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3.8 2.7e+02 2.9 0.1 3 23 134 155 133 155 0.88 2 15 6.5 4.5e+02 2.2 0.0 3 23 181 202 179 202 0.88 3 15 8.2e-05 0.0057 17.6 1.1 1 23 251 274 251 274 0.96 4 15 0.027 1.9 9.7 0.2 1 21 278 298 278 299 0.94 5 15 0.00038 0.026 15.5 0.3 2 23 305 327 304 327 0.97 6 15 0.091 6.3 8.0 1.9 1 23 334 357 334 357 0.94 7 15 9.3e-07 6.5e-05 23.7 0.9 1 23 361 383 361 383 0.98 8 15 4.9e-05 0.0034 18.3 2.3 1 20 389 408 389 410 0.96 9 15 3.8 2.7e+02 2.9 0.1 3 23 707 728 706 728 0.88 10 15 6.5 4.5e+02 2.2 0.0 3 23 754 775 752 775 0.88 11 15 3.6e-05 0.0025 18.7 2.1 3 23 826 846 824 847 0.93 12 15 0.064 4.5 8.5 0.1 3 21 853 871 852 872 0.94 13 15 0.00053 0.037 15.1 1.2 2 23 880 902 880 902 0.95 14 15 4.7e-06 0.00033 21.5 0.6 1 23 936 958 936 958 0.98 15 15 8.7e-05 0.006 17.5 2.3 1 20 964 983 964 985 0.96
Sequence Information
- Coding Sequence
- ATGGGACAGAACAAAGTcatcaataaagaaaataaacaatccTCAGAGCCTGTTGACAAATGTTTAAATATGAATACTAGTAAAACGTTTTCTAAAGATAAAAAGAATATCCGCTCCCACCCAAAGAACGATGAAGCGACAGATCCAATTAGGGACAAAACGATTAGGCCACGTCTCgggaaaaaaatcgtcaaagtGGTTGTGACAAACTCAAAGGCCTCAACGGAAAAATCTAAACCTATAAAAAAGCGTGTTAATAAAACAACTACGAACAACGAGAGCGGACCAAAACGTGACAGGCGCTTCGTAGACAAAAAGTTCCTCGAAAATGCAAGGCTATTAGTAAAACACACTACAGCGATCCCTATAAGAATCCAACTTTCCTCTATAGACGTCGCTTGCTTTGTGTGCGAAAGTAAATTCGATGATCCGTTTGCGTTCAGAGATCATTTTATCGCCGAACACAAAAATGCTGATAAAACTAAAGGCATGCATTTGTATAATAACGTCCAGACTCGCGTAGATATCACTGACTTGGCCTGCACTGAATGTACTGAAACATTAGACACCTTAGAAGCCGCAGCGCAACATCTCATTCAAGAACACAAAATAAGTATTGATCTTGAAGAGAGATTGGGTCTCGTGCCTCTCAAATTCCTTCACGTAGGTCAGTACATATGCGCTGTATGTCCCAGAAAGTGCTTATCTTTTCGAGATTTATACAGACATTCTGGTTCTCACTTTCCTATTCATGTATGTGAGATTTGCGGGAAAAAGTTCGAGTCCACCCCATCGTTGCGTAGTCATCTCAGTCGAAATCATGTCGAGGGGCATCCATGTCGAAATTGCAAGGCGGAATTCTCAACCGCTCTGGAACTAAAACAACATGTGCGAGGTGGCTGCACTGGCGTCAAATGCAAAATTTGCAATATAACGTTCCCTTACTCGCAACCTTTGCAAAAACACCGGGAAACTGTCCATGGAGCACCTAAAAGAGTCTACAAATGCACTGAATGCCCTACTATATTTGAGAAACGAATGCAGCTTTATTTCCATACCAAGAGAGAACATACCGATCATCATAAATGTCTACTCTGTGGTAGACCATTCACTGACTCTGCGAGTTTAAAACGACATATGCTAGTGCACACAGATGAACGACCTTATAGATGTCATATTTGTCAACAATCTTTCAAAAACAGATCCTATTACAAAACTCATATTGATGAGTGGAGGACAACTGACGCTTGGGTTAGCGAAGTAACGCATAGCAAGTCCCGAGACGAATGGATCGCTACGGATAGTAGATGCGTCATTCAGACTGAGATCAATGAAGTAAAATCCACTGATCCAGGATCAAACGAATGGATCACTAGTGACTTTACTCAATCGGTTATGGTTGAACTCAATGACAATTCGAGATCAAACGAATGGATCACTAGAGACTTTAGGGAATCGGTTATGGTTGAACTCAATGACAACCCAAAATCAAACGTAGATGAATGGATAGTTACAGATTCTACTGTAACGGGACAAAACAAAGTATCTGTTAATATAGAAAATAAGCAATCCAGTGAAAAACACACAGTAGATAAATCATTGCAGaacaaaactaataaaaggGTATACAGCTATAACAATATTCACTTTGAACCAAAAAACTCTGATGCGTTGGATTCAATAAGAGACAAGACGATCTGGACATATCTCGGGGACACAATTGCTAAGGTAGTTGTGTCAAACGCTAAAGCCTCAAggaaaaatacaaacaaaggagtttataaaattatagctaGTGAGGAGCTTTCTAATTATATAAATTTCCAGCCTATAAAACGTCTAAAGAACAATAAAACGTCACAGCAAATTAACGGCAAGACGATCAGTACGCGTCTCGGGAAAAATATAGTGAAAGTAGATGTATCAAACGGAAAATCCTCGAcggaaaataatgaaattataaaaaagcgTGTTTATGAAACAGCTAACAATAAGAAGAGTCTACCAAAACGTAACCGACATTTCATATACAAAAAGTTTCTTAAAAACGCAAGGCTTTTAGTAAAACACACTTCAGCGATCCCCATAAGGATCCAACTTACCTCTGTAGATGTCGCTTGCTTTGTGTGCGAAAGTAAATTCGATGATCCGTTTGCGTTCAGAGATCATTTTATCGCCGAACACAAAAATGCTGATAAAACTAAAGGCATGCATTTGTATAATAACGTTCAGACTCGCGTAGATATCACTGACTTGGCCTGCACTGAATGTACAGAAACATTAGACACCTTAGAAGCCGCAGCGCAACATCTCATTCAAGAACACAAAATAAGTATTGATCTTGAAGAGAGATTGGGTCTCGTGCCTCTCAAATTCCTTCACATAGGTCAGTACATATGCGCTGTATGTTCCAAAAAGTGCCTGAGGTTTAGAGATTTATACAGACATTCTGGTTCTCACTTTCCCATTCATTTATGTGGGATGTGTGGGAAAGAGTTCGAGTCCACCTCAGCACTGCGTAGACATGTTAGAATACACCATGGCGAGGGACGTCCATGTCTGTTTTGTAAGGCAAGATTTGCAAGCTCTGTGGAGTTACGACAACATGTGAGAGATGGCTGCACCCGTGTCGGTGCCAGATGCAAAATTTGCAACATAAAGTTCCCAGACTCCGAACATTTGCTAAAACATAATGAAACTGTACACGGAGCGCCTAAAAGACTTCACAAATGTATTGAATGTCATATTGTATTCGAGAAACGAATGCAGTTATACTTCCATACCAAGAGACAACATACCGATCATCACAAATGTGCACTTTGTGGGAAAAGATTCCCACAATCTACAGCATTAAGAGATCACATGCTAGTGCACACAGGTGAACGACCTTATAAATGTCACATTTGTCAACAAGCTTTCAAAAATAGATCCTATTACAAAACTCATATTGGTAAATGTAAAGTTTAG
- Protein Sequence
- MGQNKVINKENKQSSEPVDKCLNMNTSKTFSKDKKNIRSHPKNDEATDPIRDKTIRPRLGKKIVKVVVTNSKASTEKSKPIKKRVNKTTTNNESGPKRDRRFVDKKFLENARLLVKHTTAIPIRIQLSSIDVACFVCESKFDDPFAFRDHFIAEHKNADKTKGMHLYNNVQTRVDITDLACTECTETLDTLEAAAQHLIQEHKISIDLEERLGLVPLKFLHVGQYICAVCPRKCLSFRDLYRHSGSHFPIHVCEICGKKFESTPSLRSHLSRNHVEGHPCRNCKAEFSTALELKQHVRGGCTGVKCKICNITFPYSQPLQKHRETVHGAPKRVYKCTECPTIFEKRMQLYFHTKREHTDHHKCLLCGRPFTDSASLKRHMLVHTDERPYRCHICQQSFKNRSYYKTHIDEWRTTDAWVSEVTHSKSRDEWIATDSRCVIQTEINEVKSTDPGSNEWITSDFTQSVMVELNDNSRSNEWITRDFRESVMVELNDNPKSNVDEWIVTDSTVTGQNKVSVNIENKQSSEKHTVDKSLQNKTNKRVYSYNNIHFEPKNSDALDSIRDKTIWTYLGDTIAKVVVSNAKASRKNTNKGVYKIIASEELSNYINFQPIKRLKNNKTSQQINGKTISTRLGKNIVKVDVSNGKSSTENNEIIKKRVYETANNKKSLPKRNRHFIYKKFLKNARLLVKHTSAIPIRIQLTSVDVACFVCESKFDDPFAFRDHFIAEHKNADKTKGMHLYNNVQTRVDITDLACTECTETLDTLEAAAQHLIQEHKISIDLEERLGLVPLKFLHIGQYICAVCSKKCLRFRDLYRHSGSHFPIHLCGMCGKEFESTSALRRHVRIHHGEGRPCLFCKARFASSVELRQHVRDGCTRVGARCKICNIKFPDSEHLLKHNETVHGAPKRLHKCIECHIVFEKRMQLYFHTKRQHTDHHKCALCGKRFPQSTALRDHMLVHTGERPYKCHICQQAFKNRSYYKTHIGKCKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -