Basic Information

Insect: Xanthorhoe designata
Gene Symbol: -
Assembly: GCA_963582015.1
Location: OY757047.1:9785569-9795710[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0023 0.16 13.1 2.3 1 23 293 315 293 315 0.96

2 11 0.00013 0.0091 17.0 0.4 2 23 323 344 322 344 0.94

3 11 0.027 1.9 9.7 0.8 1 23 348 370 348 370 0.97

4 11 0.00047 0.033 15.2 0.5 1 23 375 398 375 398 0.98

5 11 0.00061 0.042 14.9 0.3 1 23 402 425 402 425 0.94

6 11 0.0044 0.3 12.2 0.2 2 21 443 462 443 467 0.92

7 11 9.8e-05 0.0069 17.4 0.9 3 23 477 498 477 498 0.98

8 11 4.3e-06 0.0003 21.7 0.8 1 23 551 573 551 573 0.99

9 11 3.7e-06 0.00026 21.9 0.7 1 23 579 601 579 601 0.98

10 11 0.018 1.3 10.2 1.8 3 23 609 629 608 629 0.99

11 11 5.3e-05 0.0037 18.2 0.2 1 23 635 658 635 658 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0023	0.16	13.1	2.3	1	23	293	315	293	315	0.96
2	11	0.00013	0.0091	17.0	0.4	2	23	323	344	322	344	0.94
3	11	0.027	1.9	9.7	0.8	1	23	348	370	348	370	0.97
4	11	0.00047	0.033	15.2	0.5	1	23	375	398	375	398	0.98
5	11	0.00061	0.042	14.9	0.3	1	23	402	425	402	425	0.94
6	11	0.0044	0.3	12.2	0.2	2	21	443	462	443	467	0.92
7	11	9.8e-05	0.0069	17.4	0.9	3	23	477	498	477	498	0.98
8	11	4.3e-06	0.0003	21.7	0.8	1	23	551	573	551	573	0.99
9	11	3.7e-06	0.00026	21.9	0.7	1	23	579	601	579	601	0.98
10	11	0.018	1.3	10.2	1.8	3	23	609	629	608	629	0.99
11	11	5.3e-05	0.0037	18.2	0.2	1	23	635	658	635	658	0.98

Sequence Information

Coding Sequence: ATGAATGTATATAAGACTGAAGAGAATGAGCATTTGAGAGTGTGTAGAGTCTGTCTCATCAGACATGTGAAAATGTACGACCTGCAGACCTACCCTTTGGAAACATACTTCGAAGCTATCATTGGGATACCTGTAATAAGCACTATGGATCTTCCACCTTACCTCTGTTATGAGTGTGCTACTCTGGTTAAGAAGTTTTCATTCTTTAGAGAACGCTGTTTGACTGGGCAGGCCACTTTGTATGGTATTCTTCAGAACAGTGGAAAgGTAAcagaaaaagaaataaacaaaatagacaGAGAAAAGTCGCGCCTTACATCCAAACTTACCATTCACATCATCAACAGCACAAACAACGATATTGTTTACACAGAAGACGGCTCAACTCTTGAGATTATTAAAAAGGAGCCACCGATGGAATATGACATCAATATGGCAGAAGTGCAGTTTAAAGATGAGGAATATGTGCCAGAAATGGATCATTCTAGTGATGATGAGCCACTGTCAGTCCATAAAGtgGCGGAGAAAGAAGTAAAGAAGAAGAGAGGAAGAAAGAAAAAGGTAACATTGGAACATCCTGaagattctaaaaataatatagattTATTGAGCTTTGCAGATCAAGGACTACCTGAGATAAGCCAACCAGAGATGGAAGAGATTGGGTTGCTTGAAGCGATGCCTAAGCGCAAGCGCGGCCGACCGGCGAAGGTCGTGGCACAACCTGCTAAGACCAGACGGACAAAGAACACCGGCGGCGTACACGTTGAAGACATCGACTTGGAAGAATATGTCACGGTTGTTAAGCTAACGCTGGAAGAGCAATTGGAGGAGATAAACAAGCGTAAAGAATCTCATAACTATCAGAACGCGGCGTTCCAATGCAACCACTGCTACAAAGGGTTCATAGACGCGAACGCGTGGAAACACCACGTGGGGAAACATGATCCCAGCGCGGGTGACATCGAATGCCCAATATGCAAATTCCGCTTCCCAACGAAACGCACGCTTCAAAAGCACGCGATCAACCACGAGAAAAAATACGCCTGTAAATCTTGCCCCTACGTCTCTAAAACTACAACACAAGCGAAACAGCATCAACGTTGGCATAAAGGCGTCACTTACACGTGCGAGTATTGCGATGAAGTGTCTACAAAATGGACGTCATATCTTTCGCATGTGCGAATAAAACATCCATCATCGTTCATCTGTTCCGTGTGTGGGTACTCCTTCGTTAGTCAACTGGGCCTTACTATGCATAAAACTATGATGCATAAAGATGTGAATGAATCGGAAAAAGCGGAGAATTGCGAAGAATCCGGCCCTTACTGTCAAGAATGCGATGTCAAATTTGTATCTTTGGAGGCGTATAATCGGCACATGGTTACTTCAGTCAAGCATTCGCAGAGTGACGATTTTAGTAAAGGCTGCCGAGTCTGCGGCGCCACCTTCTCCAACCCTGAGGAGTTGCGTCTGCATCACAGGAAGGAACACGCCAGGAAACGGCCTAAGAACTATGGGAAGAAACCGGCAGGGCACTCATGGCCCGCCAAGTGTGAACATTGTTCAGAGTGGATTGAAGACGCGCGCAGTTACTGGACACATTTCCGCCGAGCGCATCCAGACAAGAACTACCCTATTCAAAAGGATTACGTCTGCGATGTATGCGGGAAGAGTTTTAGAGGCAACGCGTTCCTGACCTACCACAAGCGCACGCACGGCGCCGAGCGCCAGTACTCGTGCGCGCAGTGCGGCAAGGCCTTCTACAACCGCACCAACCTCAGCATGCACGCGCGCACGCACAGCGACGCGCGCCCGCACGGCTGCGACGTCTGCCGCAAGGCCTTCAAGTGCAAGGGGGCGCTCGACAGGCATTACAGAAGTCACACGGGCGTGAAGCCCTACGAATGCGAAGTGTGCGGGAAAGCGTTCGGTCAGTCAAACAGCCGCAAACTGCACGTGCGGACTGTGCATCTCAAGCAACCCGCGCCCTACGTCAGTCGCACGCGCGTCGATAAACGGAAACTTAACAAAGACCAAACTCATATATTCGTTTATCCTAGCTAG
Protein Sequence: MNVYKTEENEHLRVCRVCLIRHVKMYDLQTYPLETYFEAIIGIPVISTMDLPPYLCYECATLVKKFSFFRERCLTGQATLYGILQNSGKVTEKEINKIDREKSRLTSKLTIHIINSTNNDIVYTEDGSTLEIIKKEPPMEYDINMAEVQFKDEEYVPEMDHSSDDEPLSVHKVAEKEVKKKRGRKKKVTLEHPEDSKNNIDLLSFADQGLPEISQPEMEEIGLLEAMPKRKRGRPAKVVAQPAKTRRTKNTGGVHVEDIDLEEYVTVVKLTLEEQLEEINKRKESHNYQNAAFQCNHCYKGFIDANAWKHHVGKHDPSAGDIECPICKFRFPTKRTLQKHAINHEKKYACKSCPYVSKTTTQAKQHQRWHKGVTYTCEYCDEVSTKWTSYLSHVRIKHPSSFICSVCGYSFVSQLGLTMHKTMMHKDVNESEKAENCEESGPYCQECDVKFVSLEAYNRHMVTSVKHSQSDDFSKGCRVCGATFSNPEELRLHHRKEHARKRPKNYGKKPAGHSWPAKCEHCSEWIEDARSYWTHFRRAHPDKNYPIQKDYVCDVCGKSFRGNAFLTYHKRTHGAERQYSCAQCGKAFYNRTNLSMHARTHSDARPHGCDVCRKAFKCKGALDRHYRSHTGVKPYECEVCGKAFGQSNSRKLHVRTVHLKQPAPYVSRTRVDKRKLNKDQTHIFVYPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01336155;
90% Identity: iTF_00267463; iTF_01529431;
80% Identity: -