Xdes023771.1
Basic Information
- Insect
- Xanthorhoe designata
- Gene Symbol
- ZFAT
- Assembly
- GCA_963582015.1
- Location
- OY757058.1:468881-476924[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 37 0.0012 0.081 14.0 0.2 1 23 114 137 114 137 0.96 2 37 0.74 52 5.2 0.0 2 23 164 186 163 186 0.95 3 37 0.00092 0.064 14.3 2.5 1 22 208 229 208 229 0.96 4 37 0.012 0.83 10.8 0.5 1 23 234 256 234 256 0.93 5 37 9.2 6.4e+02 1.7 3.4 1 19 261 279 261 284 0.72 6 37 4.1 2.9e+02 2.8 3.1 1 23 291 314 291 314 0.89 7 37 0.00032 0.022 15.8 2.5 1 23 321 344 321 344 0.95 8 37 0.0027 0.19 12.8 0.4 2 23 350 371 349 371 0.95 9 37 0.017 1.2 10.3 4.2 1 20 377 396 377 398 0.95 10 37 0.44 31 5.9 0.2 1 23 546 569 546 569 0.95 11 37 1.3 90 4.4 0.2 2 23 595 617 594 617 0.94 12 37 0.059 4.1 8.6 3.4 1 21 639 659 639 660 0.95 13 37 0.0051 0.36 12.0 0.2 1 23 665 687 665 687 0.92 14 37 4.4 3.1e+02 2.7 2.2 1 22 692 713 692 715 0.74 15 37 0.47 32 5.8 2.8 1 23 722 745 722 745 0.93 16 37 0.014 0.98 10.6 1.5 2 23 753 775 752 775 0.95 17 37 0.037 2.6 9.2 0.3 3 23 782 802 780 802 0.95 18 37 0.018 1.2 10.3 3.8 1 20 808 827 808 829 0.95 19 37 0.44 31 5.9 0.2 1 23 977 1000 977 1000 0.95 20 37 1.3 90 4.4 0.2 2 23 1026 1048 1025 1048 0.94 21 37 0.084 5.8 8.1 2.6 1 21 1070 1090 1070 1091 0.95 22 37 0.023 1.6 9.9 0.1 1 23 1096 1118 1096 1118 0.92 23 37 1.8 1.3e+02 3.9 1.2 1 23 1123 1146 1123 1147 0.76 24 37 0.47 32 5.8 2.8 1 23 1153 1176 1153 1176 0.93 25 37 0.014 0.98 10.6 1.5 2 23 1184 1206 1183 1206 0.95 26 37 0.014 0.98 10.6 0.2 3 23 1213 1233 1211 1233 0.93 27 37 1 70 4.8 2.4 1 14 1239 1252 1239 1256 0.87 28 37 2.3 1.6e+02 3.6 0.3 1 21 1323 1343 1323 1346 0.87 29 37 1.1 75 4.7 0.2 2 23 1373 1395 1372 1395 0.93 30 37 0.0016 0.11 13.5 1.1 2 23 1418 1439 1417 1439 0.97 31 37 2.7e-05 0.0019 19.1 0.0 1 23 1443 1465 1443 1465 0.99 32 37 0.004 0.28 12.3 1.9 1 23 1470 1493 1470 1493 0.96 33 37 4.2 3e+02 2.8 0.4 2 20 1500 1518 1499 1522 0.74 34 37 0.00056 0.039 15.0 1.8 2 23 1530 1552 1530 1552 0.97 35 37 0.00018 0.012 16.6 0.7 1 23 1558 1580 1558 1580 0.97 36 37 9.2e-07 6.5e-05 23.7 1.9 1 23 1586 1608 1586 1608 0.99 37 37 0.0019 0.14 13.3 5.0 1 23 1614 1637 1614 1637 0.97
Sequence Information
- Coding Sequence
- ATGGAACCAGACGGTTCTTTCAAAGTTGGAGAGACATCTTACATATTCGATCTATCGGAAGAGTCAGACATGCACGACAGTGATATCAAACCCAAGCTTGTTTGCAAGCAAGAAAAAATACCTGTGAAAAGAACGACATCCACATTTACTTCAAATTCAAAGACATCAGCGAAGACAACAAAGGCGAAAAACAAAATTGTGTTaccaaaaagtaaaaaaatatcgtCGTCGGAACACATTGCTGCAAATATTGAGTTGGAGAAGCATAGATACAACATTCGCACAATAATACaatgttctaacgcgactcccatACGCGTGCATAACCTCGGAAGTGGCTACGTCTGCAGCTTCTGCAAAGTCTCTTTCATCAAAGCCGCTGATCTTAAAAATCACACTATTATGGAACAtgacaataaagtaaaaagacAATTTAAATCCGTCGGCGGTTTGCGCAATTTCTTGGTGAAACTAGATATCACGTCACTGCGCTGCAGTATTTGTAACTTTGCACCCGCCAACCTGGACCAGCTGATCGAACACCTCAACAGCGTTCATGACAAAAAACTCTACACAGACATCAAAAATCACATCGTCAGCTTCAAAATAGACGAAGAAGTGTTTAAATGCCACATTTGCTCGACAGTTTTCAACAGCTTCCGGTACTTAATGTCGCATATGAACAAATACTTCGCGAACTTTTTATGTGACATCTGTGGCTCTGGTTTCGTGAACCGACATCAACTCATCTTGCATTCAGAATCCCACCAGAAAGGTTCTTATAAATGTAGATATTGTGAGAAACATTTCTTATCGGAAAAGAGACGGAAAACACACGAGCTTCGAACACATATAGCAGCTTCAGCGAAGTATAGATGCTTTCATTGCGGAGATCAGTTCAAAAATCGAACTATAAAAAAGAAACACATGATAGACGTCCACGGTGCGAAGTATGCAGATTATAAATGCAATGCCTGCGAAAAGACATTTAGGAGCTCTAAGAGTCTTACGACACACAAAGATAAAGACCATTTGATGAAACGATGGACTTGCAAGTTGTGTGACAAGGAGTTTTTCAGAGCGGACCGATTGAAACTACATGAGTTGATCCATTCTGGAGTCCGGAATTTCACGTGCGAATTGTGCACGAAATCTTTTGGCCGGAGATGCTCACTCAAAGAGCATTTGCATTTCGGGGACGATACCATCATTAAAATGGAACCAGACGGTTCTTTCAAAGTTGGAGAGACATCTTACATATTCGATCTATCGGAAGAGTCAGACATGCACGACAGTGATATCAAACCCAAGCTTGTTTGCAAGCAAGAAAAAATACTCGTGAAAAGAACGACATCAACATTTACATCAAATTCAAAGGTATCAGCGAAGATGCAAGTCAAAAGAGAACTCAATAAAGTGCAAGAGAAAACAGAAGCATCAGCGAAGATGCAAGTCAAAAGAGAACTTAATAAAGTGCAACAGAAAACAGAATCAcctaaaagtaaaacaaaacctACACCATATTCTGAGTTCATTTCTGCAAAGATGGAGTTGGAAAAGCATAGACATAACATTCGCACAATATTGCAATATTCCAACGCAACGCCCATCCGTTTACATTTCCTCGGTAGCGGCTATGTTTGTAGCTTCTGCAAAGCAACTTACCTCAAAGCCGCTGATCTTAAAAACCACACTATTGTAGACCACGACAAAATAAAAGGTATGTTCAAACCTAGCGGAGGTCTGACCAATTTCTTGGTGAAACTTGATATCACGTCACTGTGCTGCAGCATTTGTAACTTTGCACCCGCCAACCTGGACCAGCTGATCGAACACCTCAAAAGCGTTCATGCCAAAAAACTCCACACAGATATAAAAAATCACATCGTGAGCTTCAAACTAGACGGAGAAGTGTTTAAATGTCATAATTGCTTTACGGATTTTAACAGCTTCCGTAACTTACTGTCGCATCTGAACAAATACTTCGCCAACTTTTTATGTGACGTCTGCGGCTCTAGCTTCGTGAACCGATATCAACTGCTCATACATTCAGACTCGCACGCGAGTGGTTCGTACAAATGTAGCTTTTGTGAGAAGATGTTCTTGTCGAAAATGAGACGCAAAACTCACGAGCTTCGAACACATATAGCAGCTTCAGCGAAGTATAGATGCTTTCATTGCGGtgatcagttcaaaaatcgAACTGTGAAACAGAAACACATGATAGACGTCCACGGCGCGAAGTATGCCGATTTGAAATGCAATGCTTGTGAAAGGACATTTGGTAGCTACAAAAGTCTGCAGACTCATAAGAATAAAGAGCATTTGATGAGACGATGGGCTTGCAAGTTGTGTGACAAGGAGTTTTTCTTGGCGAATAGACTGAAGCGACATGAGTTGATTCATTCTGGTGTCCGGAATTTCACTTGCGAATTGTGCACGAAATCTTTTGGCCGGAGATGCTCACTCAATGAGCATTTGCATTTCGGGGACGATACCATCATTAAAATGGAACCAGACGGTTCTTTCAAAGTTGGAGAGACATCTTACATATTCGATCTATCGGAAGAGTCAGACATGCACGACAGTGATATCAAACCCAAGCTTGTTTGCAAGCAAGAAAAAATACTCGTGAAAAGAACGACATCAACATTTACATCAAATTCGAAGGTATCTGCGAAGATGCAAGTCAAAAGAGAACTCAATAAAGTGCAAGAGAAAACAGAAGCATCAGCGAAGATGCAAGTCAAAAGAGAACTTAATAAAGTGCAACAGAAAACAGAATCAcctaaaagtaaaacaaaacctACACCATATTCTGAGTTCATTTCTGCAAAGATGGAGTTGGAAAAGCATAGACATAACATTCGCACAATATTGCAATATTCCAACGCAACGCCCATCCGTTTACATTTCCTCGGTAGCGGCTATGTTTGTAGCTTCTGCAAAGCAACTTACCTCAAAGCCGCTGATCTTAAAAACCACACTATTGTAGACCACGACAAAATAAAAGGTATGTTCAGACCTAGCGGAGGTCTGACCAATTTCTTGGTGAAACTAGATATCACGTCACTGTGCTGCAGCATTTGTAACTTTGCACCCGCCAACCTGGACCAGCTGATCGAACACCTCAAAAGCGTTCATGCCAAAAAACTCCACACAGATATAAAAAATCACATCTTCAGCTTCAAACTAGACGGAGAAGTGTTTAAATGTCATAAttgcttaacggatttcaacaGCTTCCGTAACTTACTGTCGCATCTGAACAAATACTTCGCGAACTTTTTATGTGACGTCTGCGGCTCTGGCTTCGTGAACCGATATCAACTGCTCATACATTCAGACTCGCACGCGAGTGGTTCGTACAAATGTAGCTTTTGTGAGAAAATGTTCTTGTCGAAAATGAGACGCAAAGCTCACGAGCTTAGAACACATATAGCAGCTTCAGCGAAGTATAGATGCTTTCATTGCGGAGATCAGTTCAAAAACCGAACTGTGAAACAGAAACACATGATAGACGTCCACGGCGCGAAGTATGCAGATTTGAAATGCAATGCTTGTGAAAGGACATTTGGTAGCTACAAAAGTTTACAGACTCATAAGAATAAAGAGCATTTGATGAGACGATGGGCTTGCAAGTTGTGTGACAAGGAGTTTTTCAGAGCGGACCGATTGAAACTACATGAGGTGATCCATTCTGGAGTCCGGAATTTCACTTGCGAAGTGTGCTCGAAATCTTTCGGCCGAAAATgtAAAGTGAAAATCAAACAGGAAGTCATAAGTGAGGTTAAAGAGGAAACTGACGCAGAAGCACGTAAAAAGGCAAAAGGAATCAAATTAGTAAAGCATCTCCATGATACGAAGGCTCCTAACAGTCTTACGTATAAAAGGCTACAACAAAACTTAAGGCAGATCATTCAGCACTCGAACGCAACGCCGATAAGACGGGTCAATGATTTAGATTACGTCTGCGCGTATTGCGAGTACCAAACTCCTAACCCAGCCGAGCTAAAATGCCACACAATAGATATTCACAGTGAAGAAACCGTAGTCACATCGACTAAGAAAATGTCCGCGCACGATTTACTAGTTAAGTTAGACATTACATCCCTCAGCTGCAAGCTTTGCAATCACAATTTGGAAAACTTGGAGGCTCTGCTTGAGCATCTGCAAGCCATACACAACAGAAAGATCCACACGGACGTCCAAAATCAAATATTGCCTTTCAAATTCGGAAACGGACCCCTCACTTGCTTTATTTGCGACGCTTGCTTTCCCACTTTTAAGATGTTAAACGTGCACGTTAATACACACTATAGACACTACGTATGCGAAATATGTGGTCTAGGCTTCGTGAATCCGAACAAGCTCGGGAAACACATGCTCACACATAAAACTGGGACGTTTGTGTGCACGCATTGTTTCAAGGACTTTGCGACAAATGTTAAAATGAAGGCGCACGTGAAGCAAGTTCATGGGCCAAAGCTGAGGCTTAAATGCTGGCATTGTAACGAACGATTCGGAGACATTCTAGTGAAGGAGAAGCATATGACTGAAGCACACGGGATTATGTTCCCTACACCGAAATGTGACTCTTGCGACAAAGTTTTCATTCATCGCAGGGCTTTGAACTCGCACGTGAAGCGGGTGCATCTTATGGATCGCCGGCACGAATGCCCCGAATGTGATATGAAGTTCTTCGCGTCTGCTGAGCTGAGAAACCATATGTTGAAGCATACTGGCGCAAGGCATTTCCAATGCCAAGTCTGTCTTAAGCGGTACTCGAGAAAGAGCAATCTGACGGAACATATGAGAATCCACGCGAATGATCGAAGGTTCAAATGTGAACATTGTGGGATGACGTTTGTGCAGAAGTGTAGCTGGAGGGGGCATTTGCGAAATAAACACGGAGATATTGCTTAG
- Protein Sequence
- MEPDGSFKVGETSYIFDLSEESDMHDSDIKPKLVCKQEKIPVKRTTSTFTSNSKTSAKTTKAKNKIVLPKSKKISSSEHIAANIELEKHRYNIRTIIQCSNATPIRVHNLGSGYVCSFCKVSFIKAADLKNHTIMEHDNKVKRQFKSVGGLRNFLVKLDITSLRCSICNFAPANLDQLIEHLNSVHDKKLYTDIKNHIVSFKIDEEVFKCHICSTVFNSFRYLMSHMNKYFANFLCDICGSGFVNRHQLILHSESHQKGSYKCRYCEKHFLSEKRRKTHELRTHIAASAKYRCFHCGDQFKNRTIKKKHMIDVHGAKYADYKCNACEKTFRSSKSLTTHKDKDHLMKRWTCKLCDKEFFRADRLKLHELIHSGVRNFTCELCTKSFGRRCSLKEHLHFGDDTIIKMEPDGSFKVGETSYIFDLSEESDMHDSDIKPKLVCKQEKILVKRTTSTFTSNSKVSAKMQVKRELNKVQEKTEASAKMQVKRELNKVQQKTESPKSKTKPTPYSEFISAKMELEKHRHNIRTILQYSNATPIRLHFLGSGYVCSFCKATYLKAADLKNHTIVDHDKIKGMFKPSGGLTNFLVKLDITSLCCSICNFAPANLDQLIEHLKSVHAKKLHTDIKNHIVSFKLDGEVFKCHNCFTDFNSFRNLLSHLNKYFANFLCDVCGSSFVNRYQLLIHSDSHASGSYKCSFCEKMFLSKMRRKTHELRTHIAASAKYRCFHCGDQFKNRTVKQKHMIDVHGAKYADLKCNACERTFGSYKSLQTHKNKEHLMRRWACKLCDKEFFLANRLKRHELIHSGVRNFTCELCTKSFGRRCSLNEHLHFGDDTIIKMEPDGSFKVGETSYIFDLSEESDMHDSDIKPKLVCKQEKILVKRTTSTFTSNSKVSAKMQVKRELNKVQEKTEASAKMQVKRELNKVQQKTESPKSKTKPTPYSEFISAKMELEKHRHNIRTILQYSNATPIRLHFLGSGYVCSFCKATYLKAADLKNHTIVDHDKIKGMFRPSGGLTNFLVKLDITSLCCSICNFAPANLDQLIEHLKSVHAKKLHTDIKNHIFSFKLDGEVFKCHNCLTDFNSFRNLLSHLNKYFANFLCDVCGSGFVNRYQLLIHSDSHASGSYKCSFCEKMFLSKMRRKAHELRTHIAASAKYRCFHCGDQFKNRTVKQKHMIDVHGAKYADLKCNACERTFGSYKSLQTHKNKEHLMRRWACKLCDKEFFRADRLKLHEVIHSGVRNFTCEVCSKSFGRKCKVKIKQEVISEVKEETDAEARKKAKGIKLVKHLHDTKAPNSLTYKRLQQNLRQIIQHSNATPIRRVNDLDYVCAYCEYQTPNPAELKCHTIDIHSEETVVTSTKKMSAHDLLVKLDITSLSCKLCNHNLENLEALLEHLQAIHNRKIHTDVQNQILPFKFGNGPLTCFICDACFPTFKMLNVHVNTHYRHYVCEICGLGFVNPNKLGKHMLTHKTGTFVCTHCFKDFATNVKMKAHVKQVHGPKLRLKCWHCNERFGDILVKEKHMTEAHGIMFPTPKCDSCDKVFIHRRALNSHVKRVHLMDRRHECPECDMKFFASAELRNHMLKHTGARHFQCQVCLKRYSRKSNLTEHMRIHANDRRFKCEHCGMTFVQKCSWRGHLRNKHGDIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -