Basic Information

Insect: Xanthorhoe designata
Gene Symbol: -
Assembly: GCA_963582015.1
Location: OY757054.1:2651145-2653356[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0062 0.43 11.7 5.5 1 23 148 170 148 170 0.97

2 16 3.1e-05 0.0022 18.9 1.4 1 23 176 199 176 199 0.92

3 16 0.19 13 7.1 0.4 3 23 208 228 206 228 0.95

4 16 8.4e-05 0.0059 17.6 2.8 1 23 235 257 235 257 0.96

5 16 1.1e-05 0.00074 20.4 1.8 1 23 264 286 264 286 0.97

6 16 1.1e-07 7.4e-06 26.7 2.1 1 23 292 314 292 314 0.99

7 16 6.9e-05 0.0048 17.9 2.9 1 23 320 342 320 342 0.98

8 16 1.3e-06 8.7e-05 23.3 1.6 1 23 348 370 348 370 0.98

9 16 6.8e-05 0.0047 17.9 1.9 1 23 376 398 376 398 0.98

10 16 1e-05 0.00071 20.5 0.2 1 23 404 426 404 426 0.98

11 16 1.8e-06 0.00013 22.8 5.4 1 23 432 454 432 454 0.97

12 16 1.1e-07 7.4e-06 26.7 0.3 1 23 460 482 460 482 0.98

13 16 0.00055 0.039 15.0 2.3 1 23 488 510 488 510 0.96

14 16 4.3e-07 3e-05 24.8 0.5 1 23 516 539 516 539 0.97

15 16 1.9e-06 0.00013 22.8 1.5 1 23 545 567 545 567 0.99

16 16 0.0031 0.22 12.6 5.3 1 23 573 595 573 595 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0062	0.43	11.7	5.5	1	23	148	170	148	170	0.97
2	16	3.1e-05	0.0022	18.9	1.4	1	23	176	199	176	199	0.92
3	16	0.19	13	7.1	0.4	3	23	208	228	206	228	0.95
4	16	8.4e-05	0.0059	17.6	2.8	1	23	235	257	235	257	0.96
5	16	1.1e-05	0.00074	20.4	1.8	1	23	264	286	264	286	0.97
6	16	1.1e-07	7.4e-06	26.7	2.1	1	23	292	314	292	314	0.99
7	16	6.9e-05	0.0048	17.9	2.9	1	23	320	342	320	342	0.98
8	16	1.3e-06	8.7e-05	23.3	1.6	1	23	348	370	348	370	0.98
9	16	6.8e-05	0.0047	17.9	1.9	1	23	376	398	376	398	0.98
10	16	1e-05	0.00071	20.5	0.2	1	23	404	426	404	426	0.98
11	16	1.8e-06	0.00013	22.8	5.4	1	23	432	454	432	454	0.97
12	16	1.1e-07	7.4e-06	26.7	0.3	1	23	460	482	460	482	0.98
13	16	0.00055	0.039	15.0	2.3	1	23	488	510	488	510	0.96
14	16	4.3e-07	3e-05	24.8	0.5	1	23	516	539	516	539	0.97
15	16	1.9e-06	0.00013	22.8	1.5	1	23	545	567	545	567	0.99
16	16	0.0031	0.22	12.6	5.3	1	23	573	595	573	595	0.98

Sequence Information

Coding Sequence: ATGACGACAACAACAGAGAGAGTCCTGATAGAGTTCTTCAAAAATAGCTTTGAGTTGAATGAAGAAACTTCCAATATGCTAAACATAGAGAAACAATTCAATTTATCAATATCAGTTGTTGAGCACACTGCCTGCCATGATTCCAATGATCTGAGTGCTGTGAAGGAGGAGGTGGAAAGCAATGATTATTAcgattttgatgatgatgaccacAACAGTATAAAAGATGAAGcTTCAACAAGAAAGAGCAATAGAGCTtctgaaattaataaaacaaaggaaataagtctcaaagaaataaaaagtgAGAGCACTGATACTTTAACTAAATGCAATGGagagaatttaaaaaatttctCCAACAAAATTACTCgtggaaataataaaagtaaaacagaagattatgatgatgaaattGATGCCAGTAGTTCAGAGTTGAACTTTTTTTGTCCAAAATGCAATAAAACCCATGTCACCAAAAAGGCTCTACACCAGCACATGAAAGTACATGACCACAACAGACGATTTGTGTGTGAAATATGCAAATACAGATTCAATACAAAGGCCAACTTAAAAACGCATAAAGACAACTTGCACAGAAAAGAAAGCGAAGCAATTGCATGCACAGTTTGTAATAAACTTATGAACAGTCCACAAATTTTAAAACGCCACATGAAAAGTCATTTAGAAAAGCCGAAAATTCACGCATGCGATAAATGCGACTTAAAGTTTTCTGATAGGAGTACTTTAGTAAGACATAAGACAACACACACTGAAGATACCGCCAAGCACACCTGTCCAATATGCAAGAAGGCATTCTCAGTAATATATTACCTAAAAAGTCATATGAAACTTCACACAGGGGAAAAGCCTTACTCCTGCGAAAGATGCGGGAAAGCGTTCACACTCAACAGTCATTTGACTATCCATATGCGCACGCACACAGGGGAACGACCGTACGCGTGCAGCAAATGCGATAAAAGATACTCTAGTTTAGCCCACGTTAAATACCATATGAAAATGCATACAGGAGAAAAAGGCTACTCTTGCGATGTCTGTCAAAAAGCTTTCTCTGAGAGCAGCCACTGGAAAAGTCATATGAGAATTCACACTGGTGAAAAACCTTATGCTTGTGATATGTGTGATAAGAAATTTATAGGTCACACAAACTTGAAGTTGCATAAGAGAATACACACTGGGGTGAAGCCGCATGTCTGTGATGTATGCGGTAAAGCGTTCGCTCAAAAATCTGTTATGATAATCCATGTGAGAACTCATACAGGGGAGAAGCCGTTCGCTTGCCATCGGTGCGGAAAAACATTCAGCATGTCCACGCATTTGAGAACGCACATGAGAATACACACGGGTGAAAAACCGTACGCTTGCGAGATATGTGGTAAGACGTTTGCAGAAAACGCCCGTCTAAAAAGACATATGAGAACGCACACAGGGGAAAAACCCTACGACTGTTCAATGTGCGACAAATCTTTTGCCGATTACACAAACTTAAAATGCCATTTGGTAACCCATACAGGAGAAAAACCATACGCTTGTGACAGATGTGGGAAGACATTTACACAGCAAGGCACAATGAGAAAACACATTCGTATAGTCCATTTAAAAGAAAGGCCGTACGTCTGTGATATGTGCCCGAAGACTTACACTAAAAGTCATGCTTTGAAAGTTCATGTGCGAACTCATACTGGAGAAAGACCGTATAACTGTAGTAAATGCAGTAAAACGTTCACTAGCCATGAGATAATGAAACGGCACTTAAAAACTCATGGCGAAGGATACGAGAAATGCGATGTTTTGTCTGATAGTGTGATGATGGATGGCGTTGAAGATCACTCTATAAAATGA
Protein Sequence: MTTTTERVLIEFFKNSFELNEETSNMLNIEKQFNLSISVVEHTACHDSNDLSAVKEEVESNDYYDFDDDDHNSIKDEASTRKSNRASEINKTKEISLKEIKSESTDTLTKCNGENLKNFSNKITRGNNKSKTEDYDDEIDASSSELNFFCPKCNKTHVTKKALHQHMKVHDHNRRFVCEICKYRFNTKANLKTHKDNLHRKESEAIACTVCNKLMNSPQILKRHMKSHLEKPKIHACDKCDLKFSDRSTLVRHKTTHTEDTAKHTCPICKKAFSVIYYLKSHMKLHTGEKPYSCERCGKAFTLNSHLTIHMRTHTGERPYACSKCDKRYSSLAHVKYHMKMHTGEKGYSCDVCQKAFSESSHWKSHMRIHTGEKPYACDMCDKKFIGHTNLKLHKRIHTGVKPHVCDVCGKAFAQKSVMIIHVRTHTGEKPFACHRCGKTFSMSTHLRTHMRIHTGEKPYACEICGKTFAENARLKRHMRTHTGEKPYDCSMCDKSFADYTNLKCHLVTHTGEKPYACDRCGKTFTQQGTMRKHIRIVHLKERPYVCDMCPKTYTKSHALKVHVRTHTGERPYNCSKCSKTFTSHEIMKRHLKTHGEGYEKCDVLSDSVMMDGVEDHSIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -